| genbank/nr [blastx] | Showing best 31 hits recorded |
| Match: gi|15218790|ref|NP_171835.1| |
score: 149.1 |
e-value: 1.2e-35 |
Identity: 64.29% |
Span: 333bp (83.5%) |
Frame: 2 |
| ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease [Arabidopsis thaliana] >gi3850568... |
| Match: gi|21741863|emb|CAD41453.1| |
score: 145.6 |
e-value: 1.3e-34 |
Identity: 66.96% |
Span: 333bp (83.5%) |
Frame: 2 |
| gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21450259|ref|NP_659135.1| |
score: 85.5 |
e-value: 1.6e-16 |
Identity: 44.44% |
Span: 297bp (74.4%) |
Frame: 2 |
| gi|21450259|ref|NP_659135.1| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exoribonuclease [Mus musculus]... |
| Match: gi|34853693|ref|XP_345337.1| |
score: 84.34 |
e-value: 3.7e-16 |
Identity: 43.43% |
Span: 297bp (74.4%) |
Frame: 2 |
| gi|34853693|ref|XP_345337.1| similar to Homolog of Yeast RRP4 (ribosomal RNA processing 4), 3-5-exoribonuclease [Ratt... |
| Match: gi|20378673|gb|AAM20932.1| |
score: 79.72 |
e-value: 9e-15 |
Identity: 51.95% |
Span: 228bp (57.1%) |
Frame: 2 |
| gi|20378673|gb|AAM20932.1| exonuclease [Phytophthora sojae] |
| Match: gi|19923403|ref|NP_055100.2| |
score: 78.57 |
e-value: 2e-14 |
Identity: 42.42% |
Span: 297bp (74.4%) |
Frame: 2 |
| gi|19923403|ref|NP_055100.2| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exorib [Homo sapiens] gi|13878... |
| Match: gi|19113896|ref|NP_592984.1| |
score: 77.41 |
e-value: 4.5e-14 |
Identity: 39.77% |
Span: 264bp (66.2%) |
Frame: 2 |
| gi|19113896|ref|NP_592984.1| conserved hypothetical protein [Schizosaccharomyces pombe] gi|1175376|sp|Q09704|RRP4_SCH... |
| Match: gi|24762324|ref|NP_611807.1| |
score: 73.17 |
e-value: 8.5e-13 |
Identity: 35.71% |
Span: 288bp (72.2%) |
Frame: 2 |
| gi|24762324|ref|NP_611807.1| CG3931-PA [Drosophila melanogaster] gi|7291605|gb|AAF47028.1| CG3931-PA [Drosophila mela... |
| Match: gi|21428348|gb|AAM49834.1| |
score: 73.17 |
e-value: 8.5e-13 |
Identity: 35.71% |
Span: 288bp (72.2%) |
Frame: 2 |
| gi|21428348|gb|AAM49834.1| GM02257p [Drosophila melanogaster] |
| Match: gi|32405430|ref|XP_323328.1| |
score: 71.25 |
e-value: 3.2e-12 |
Identity: 39.36% |
Span: 267bp (66.9%) |
Frame: 2 |
| gi|32405430|ref|XP_323328.1| hypothetical protein [Neurospora crassa] gi|28918718|gb|EAA28388.1| hypothetical protein... |
| Match: gi|6321860|ref|NP_011936.1| |
score: 70.48 |
e-value: 5.5e-12 |
Identity: 38.1% |
Span: 252bp (63.2%) |
Frame: 2 |
| gi|6321860|ref|NP_011936.1| Ribosomal RNA Processing; Rrp4p [Saccharomyces cerevisiae] gi|731671|sp|P38792|RRP4_YEAST... |
| Match: gi|38111572|gb|EAA57131.1| |
score: 70.09 |
e-value: 7.2e-12 |
Identity: 36.36% |
Span: 225bp (56.4%) |
Frame: 2 |
| gi|38111572|gb|EAA57131.1| hypothetical protein MG08100.4 [Magnaporthe grisea 70-15] |
| Match: gi|514266|gb|AAB60392.1| |
score: 64.7 |
e-value: 3e-10 |
Identity: 40.91% |
Span: 264bp (66.2%) |
Frame: 2 |
| gi|514266|gb|AAB60392.1| unknown [Homo sapiens] |
| Match: gi|31200969|ref|XP_309432.1| |
score: 64.31 |
e-value: 3.9e-10 |
Identity: 37.5% |
Span: 264bp (66.2%) |
Frame: 2 |
| gi|31200969|ref|XP_309432.1| ENSANGP00000011203 [Anopheles gambiae] gi|21293139|gb|EAA05284.1| ENSANGP00000011203 [An... |
| Match: gi|17544090|ref|NP_500978.1| |
score: 63.54 |
e-value: 6.7e-10 |
Identity: 37.7% |
Span: 183bp (45.9%) |
Frame: 2 |
| gi|17544090|ref|NP_500978.1| homolog of Yeast rrp4 like (34.1 kD) (4H181) [Caenorhabditis elegans] gi|14574491|gb|AAK... |
| Match: gi|19074743|ref|NP_586249.1| |
score: 56.22 |
e-value: 1.1e-07 |
Identity: 34.62% |
Span: 231bp (57.9%) |
Frame: 2 |
| gi|19074743|ref|NP_586249.1| similarity to HYPOTHETICAL PROTEIN YAZE_SCHPO [Encephalitozoon cuniculi] gi|19069385|emb... |
| Match: gi|23489830|gb|EAA21746.1| |
score: 55.45 |
e-value: 1.8e-07 |
Identity: 31.07% |
Span: 276bp (69.2%) |
Frame: 2 |
| gi|23489830|gb|EAA21746.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|14250901|emb|CAC39255.1| |
score: 53.91 |
e-value: 5.3e-07 |
Identity: 44.23% |
Span: 156bp (39.1%) |
Frame: 2 |
| gi|14250901|emb|CAC39255.1| Rrp4p homologue [Trypanosoma brucei] |
| Match: gi|23510093|ref|NP_702759.1| |
score: 53.91 |
e-value: 5.3e-07 |
Identity: 34.85% |
Span: 198bp (49.6%) |
Frame: 2 |
| gi|23510093|ref|NP_702759.1| exosome complex exonuclease rrp4, putative [Plasmodium falciparum 3D7] gi|6562740|emb|CA... |
| Match: gi|11498103|ref|NP_069328.1| |
score: 48.52 |
e-value: 2.2e-05 |
Identity: 33.33% |
Span: 225bp (56.4%) |
Frame: 2 |
| gi|11498103|ref|NP_069328.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] gi|29336577|sp|O29758|E... |
| Match: gi|29248172|gb|EAA39713.1| |
score: 46.98 |
e-value: 6.5e-05 |
Identity: 28.57% |
Span: 228bp (57.1%) |
Frame: 2 |
| gi|29248172|gb|EAA39713.1| GLP_741_57068_56280 [Giardia lamblia ATCC 50803] |
| Match: gi|18977941|ref|NP_579298.1| |
score: 44.28 |
e-value: 0.00042 |
Identity: 32.2% |
Span: 177bp (44.4%) |
Frame: 2 |
| gi|18977941|ref|NP_579298.1| hypothetical protein PF1569 [Pyrococcus furiosus DSM 3638] gi|29336821|sp|Q8U0L8|ECR1_PY... |
| Match: gi|14591334|ref|NP_143412.1| |
score: 43.9 |
e-value: 0.00055 |
Identity: 32.2% |
Span: 177bp (44.4%) |
Frame: 2 |
| gi|14591334|ref|NP_143412.1| hypothetical protein PH1551 [Pyrococcus horikoshii] gi|29336583|sp|O59221|ECR1_PYRHO Pro... |
| Match: gi|14520825|ref|NP_126300.1| |
score: 43.9 |
e-value: 0.00055 |
Identity: 32.2% |
Span: 177bp (44.4%) |
Frame: 2 |
| gi|14520825|ref|NP_126300.1| hypothetical protein [Pyrococcus abyssi] gi|29337011|sp|Q9V120|ECR1_PYRAB Probable exoso... |
| Match: gi|21228724|ref|NP_634646.1| |
score: 43.9 |
e-value: 0.00055 |
Identity: 29.85% |
Span: 201bp (50.4%) |
Frame: 2 |
| gi|21228724|ref|NP_634646.1| hypothetical protein [Methanosarcina mazei Goe1] gi|29336796|sp|Q8PTT9|ECR1_METMA Probab... |
| Match: gi|15678711|ref|NP_275827.1| |
score: 43.9 |
e-value: 0.00055 |
Identity: 28.79% |
Span: 198bp (49.6%) |
Frame: 2 |
| gi|15678711|ref|NP_275827.1| conserved protein [Methanothermobacter thermautotrophicus] gi|29336574|sp|O26780|ECR1_ME... |
| Match: gi|23050358|ref|ZP_00077282.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 28.36% |
Span: 201bp (50.4%) |
Frame: 2 |
| gi|23050358|ref|ZP_00077282.1| COG1097: RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domai... |
| Match: gi|20090628|ref|NP_616703.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 28.36% |
Span: 201bp (50.4%) |
Frame: 2 |
| gi|20090628|ref|NP_616703.1| RNA-binding protein [Methanosarcina acetivorans str. C2A] gi|29336814|sp|Q8TPX7|ECR1_MET... |
| Match: gi|22406214|ref|ZP_00001066.1| |
score: 36.96 |
e-value: 0.067 |
Identity: 29.55% |
Span: 132bp (33.1%) |
Frame: 2 |
| gi|22406214|ref|ZP_00001066.1| COG1097: RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domai... |
| Match: gi|18313179|ref|NP_559846.1| |
score: 36.58 |
e-value: 0.088 |
Identity: 31.25% |
Span: 192bp (48.1%) |
Frame: 2 |
| gi|18313179|ref|NP_559846.1| conserved hypothetical protein [Pyrobaculum aerophilum] gi|29336867|sp|Q8ZVM8|ECR1_PYRAE... |
| Match: gi|16082285|ref|NP_394746.1| |
score: 36.58 |
e-value: 0.088 |
Identity: 36.36% |
Span: 132bp (33.1%) |
Frame: 2 |
| gi|16082285|ref|NP_394746.1| conserved hypothetical protein [Thermoplasma acidophilum] gi|29336950|sp|Q9HIP3|ECR1_THE... |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1g03360.1 |
score: 149.1 |
e-value: 6.3e-37 |
Identity: 64.29% |
Span: 333bp (83.5%) |
Frame: 2 |
| At1g03360.1 68408.m00282 expressed protein Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharo... |
|
