genbank/nr [blastx] | Showing best 25 hits recorded |
Match: gi|187373099|gb|ACD03270.1| |
score: 146 |
e-value: 7e-34 |
Identity: 94.52% |
Span: 219bp (58.4%) |
Frame: 1 |
glycine-rich RNA-binding protein [Nicotiana tabacum] |
Match: gi|82623423|gb|ABB87126.1| |
score: 146 |
e-value: 9e-34 |
Identity: 95.89% |
Span: 219bp (58.4%) |
Frame: 1 |
putative glycine-rich RNA binding protein-like [Solanum tuberosum] |
Match: gi|799015|emb|CAA89058.1| |
score: 145 |
e-value: 1e-33 |
Identity: 97.26% |
Span: 219bp (58.4%) |
Frame: 1 |
putative glycine rich RNA binding protein [Solanum tuberosum] |
Match: gi|2226370|gb|AAC50020.1| |
score: 145 |
e-value: 2e-33 |
Identity: 93.15% |
Span: 219bp (58.4%) |
Frame: 1 |
RNA-binding protein [Nicotiana glutinosa] |
Match: gi|6911144|gb|AAF31403.1|AF200322_1 |
score: 140 |
e-value: 4e-32 |
Identity: 91.67% |
Span: 216bp (57.6%) |
Frame: 1 |
putative glycine-rich RNA binding protein 3 [Catharanthus roseus] |
Match: gi|469070|dbj|BAA03741.1| |
score: 140 |
e-value: 4e-32 |
Identity: 89.04% |
Span: 219bp (58.4%) |
Frame: 1 |
RNA-binding glycine-rich protein-1a [Nicotiana sylvestris] |
Match: gi|111162637|gb|ABH07505.1| |
score: 140 |
e-value: 6e-32 |
Identity: 89.04% |
Span: 219bp (58.4%) |
Frame: 1 |
glycine-rich RNA-binding protein [Nicotiana attenuata] |
Match: gi|469072|dbj|BAA03743.1| |
score: 138 |
e-value: 2e-31 |
Identity: 89.04% |
Span: 219bp (58.4%) |
Frame: 1 |
RNA-binding gricine-rich protein-1c [Nicotiana sylvestris] |
Match: gi|224077836|ref|XP_002305429.1| |
score: 134 |
e-value: 3e-30 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
predicted protein [Populus trichocarpa] >gi118481826|gb|ABK92850.1| unknown [Populus trichocarpa] >gi|222848393|gb|EE... |
Match: gi|6911142|gb|AAF31402.1| |
score: 134 |
e-value: 3e-30 |
Identity: 87.5% |
Span: 216bp (57.6%) |
Frame: 1 |
putative glycine-rich RNA binding protein 1 [Catharanthus roseus] |
Match: gi|469071|dbj|BAA03742.1| |
score: 134 |
e-value: 5e-30 |
Identity: 84.93% |
Span: 219bp (58.4%) |
Frame: 1 |
RNA-binding glycine-rich protein-1b [Nicotiana sylvestris] |
Match: gi|224105391|ref|XP_002313795.1| |
score: 133 |
e-value: 6e-30 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
predicted protein [Populus trichocarpa] >gi222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa] |
Match: gi|118489085|gb|ABK96349.1| |
score: 133 |
e-value: 6e-30 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
unknown [Populus trichocarpa x Populus deltoides] |
Match: gi|118481677|gb|ABK92779.1| |
score: 133 |
e-value: 6e-30 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
unknown [Populus trichocarpa] >gi118481702|gb|ABK92791.1| unknown [Populus trichocarpa] >gi|118482754|gb|ABK93295.1| ... |
Match: gi|209976406|gb|ACJ04160.1| |
score: 131 |
e-value: 2e-29 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
putative glycine-rich RNA-binding protein [Chorispora bungeana] |
Match: gi|1346180|sp|P49310.1|GRP1_SINAL |
score: 131 |
e-value: 2e-29 |
Identity: 85.92% |
Span: 213bp (56.8%) |
Frame: 1 |
RecName: Full=Glycine-rich RNA-binding protein GRP1A >gi496233|gb|AAA59212.1| homology with RNA-binding proteins in m... |
Match: gi|227206222|dbj|BAH57166.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
AT2G21660 [Arabidopsis thaliana] |
Match: gi|227204227|dbj|BAH56965.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
AT2G21660 [Arabidopsis thaliana] |
Match: gi|6911146|gb|AAF31404.1|AF200323_1 |
score: 131 |
e-value: 3e-29 |
Identity: 84.72% |
Span: 216bp (57.6%) |
Frame: 1 |
putative glycine-rich RNA-binding protein 2 [Catharanthus roseus] |
Match: gi|30681492|ref|NP_850017.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA bin... |
Match: gi|21553354|gb|AAM62447.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
glycine-rich RNA binding protein 7 [Arabidopsis thaliana] |
Match: gi|544426|sp|Q03878.1|GRP1_DAUCA |
score: 131 |
e-value: 3e-29 |
Identity: 80.82% |
Span: 219bp (58.4%) |
Frame: 1 |
RecName: Full=Glycine-rich RNA-binding protein >gi18347|emb|CAA41152.1| glycine-rich protein [Daucus carota] >gi|4451... |
Match: gi|15226605|ref|NP_179760.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA bin... |
Match: gi|20152613|emb|CAD29693.1| |
score: 130 |
e-value: 4e-29 |
Identity: 86.11% |
Span: 216bp (57.6%) |
Frame: 1 |
putative glycine rich protein [Rumex obtusifolius] |
Match: gi|211906474|gb|ACJ11730.1| |
score: 130 |
e-value: 7e-29 |
Identity: 83.33% |
Span: 216bp (57.6%) |
Frame: 1 |
glycine-rich RNA-binding protein [Gossypium hirsutum] |
|
225 lower scoring hits censored -- only 25 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
Match: At2G21660.2 |
score: 131 |
e-value: 1e-31 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
Match: At2G21660.1 |
score: 131 |
e-value: 1e-31 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
Match: At4G39260.3 |
score: 123 |
e-value: 3e-29 |
Identity: 76.71% |
Span: 219bp (58.4%) |
Frame: 1 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G39260.2 |
score: 123 |
e-value: 3e-29 |
Identity: 76.71% |
Span: 219bp (58.4%) |
Frame: 1 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G39260.1 |
score: 123 |
e-value: 3e-29 |
Identity: 76.71% |
Span: 219bp (58.4%) |
Frame: 1 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G39260.4 |
score: 118 |
e-value: 8e-28 |
Identity: 78.26% |
Span: 207bp (55.2%) |
Frame: 1 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At3G26420.1 |
score: 100 |
e-value: 2e-22 |
Identity: 60.56% |
Span: 213bp (56.8%) |
Frame: 1 |
Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
Match: At4G13850.4 |
score: 85.1 |
e-value: 1e-17 |
Identity: 56.72% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
Match: At4G13850.3 |
score: 85.1 |
e-value: 1e-17 |
Identity: 56.72% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
Match: At4G13850.2 |
score: 85.1 |
e-value: 1e-17 |
Identity: 56.72% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
Match: At4G13850.1 |
score: 85.1 |
e-value: 1e-17 |
Identity: 56.72% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
Match: At3G23830.2 |
score: 81.3 |
e-value: 1e-16 |
Identity: 53.73% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
Match: At3G23830.1 |
score: 81.3 |
e-value: 1e-16 |
Identity: 53.73% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
Match: At5G61030.1 |
score: 80.5 |
e-value: 2e-16 |
Identity: 51.52% |
Span: 198bp (52.8%) |
Frame: 1 |
Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
Match: At2G21690.1 |
score: 78.6 |
e-value: 9e-16 |
Identity: 53.62% |
Span: 207bp (55.2%) |
Frame: 1 |
RNA-binding protein, putative | chr2:9277194-9277677 REVERSE |
Match: At2G37220.1 |
score: 76.3 |
e-value: 5e-15 |
Identity: 47.76% |
Span: 201bp (53.6%) |
Frame: 1 |
29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
Match: At1G60650.2 |
score: 76.3 |
e-value: 5e-15 |
Identity: 47.14% |
Span: 210bp (56.0%) |
Frame: 1 |
glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
Match: At1G60650.1 |
score: 76.3 |
e-value: 5e-15 |
Identity: 47.14% |
Span: 210bp (56.0%) |
Frame: 1 |
glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
Match: At3G53460.2 |
score: 75.5 |
e-value: 8e-15 |
Identity: 47.76% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
Match: At3G53460.1 |
score: 75.5 |
e-value: 8e-15 |
Identity: 47.76% |
Span: 201bp (53.6%) |
Frame: 1 |
Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
Match: At4G24770.1 |
score: 75.1 |
e-value: 1e-14 |
Identity: 47.06% |
Span: 204bp (54.4%) |
Frame: 1 |
Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
Match: At5G04280.1 |
score: 74.7 |
e-value: 1e-14 |
Identity: 50.77% |
Span: 195bp (52.0%) |
Frame: 1 |
glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD |
Match: At2G46780.1 |
score: 74.3 |
e-value: 2e-14 |
Identity: 42.5% |
Span: 240bp (64.0%) |
Frame: 1 |
RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD |
Match: At1G74230.1 |
score: 74.3 |
e-value: 2e-14 |
Identity: 48.75% |
Span: 240bp (64.0%) |
Frame: 1 |
Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
Match: At1G76460.1 |
score: 73.9 |
e-value: 2e-14 |
Identity: 56.14% |
Span: 171bp (45.6%) |
Frame: 1 |
RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE |
|
37 lower scoring hits censored -- only 25 best hits are stored. |
swissprot [blastx] | Showing best 25 hits recorded |
Match: P49310 |
score: 131 |
e-value: 1e-30 |
Identity: 85.92% |
Span: 213bp (56.8%) |
Frame: 1 |
Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1 |
Match: Q03250 |
score: 131 |
e-value: 1e-30 |
Identity: 84.51% |
Span: 213bp (56.8%) |
Frame: 1 |
Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1 |
Match: Q03878 |
score: 131 |
e-value: 1e-30 |
Identity: 80.82% |
Span: 219bp (58.4%) |
Frame: 1 |
Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1 |
Match: P49311 |
score: 129 |
e-value: 7e-30 |
Identity: 83.1% |
Span: 213bp (56.8%) |
Frame: 1 |
Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1 |
Match: Q43472 |
score: 124 |
e-value: 2e-28 |
Identity: 78.08% |
Span: 219bp (58.4%) |
Frame: 1 |
Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1 |
Match: Q03251 |
score: 123 |
e-value: 3e-28 |
Identity: 76.71% |
Span: 219bp (58.4%) |
Frame: 1 |
Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1 |
Match: Q05966 |
score: 120 |
e-value: 2e-27 |
Identity: 75.34% |
Span: 219bp (58.4%) |
Frame: 1 |
Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1 |
Match: Q99070 |
score: 117 |
e-value: 3e-26 |
Identity: 72.22% |
Span: 216bp (57.6%) |
Frame: 1 |
Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 |
Match: P10979 |
score: 115 |
e-value: 6e-26 |
Identity: 70.83% |
Span: 216bp (57.6%) |
Frame: 1 |
Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1 |
Match: Q9SVM8 |
score: 85.1 |
e-value: 1e-16 |
Identity: 56.72% |
Span: 201bp (53.6%) |
Frame: 1 |
Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1 |
Match: Q99069 |
score: 81.6 |
e-value: 1e-15 |
Identity: 75.47% |
Span: 159bp (42.4%) |
Frame: 1 |
Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1 |
Match: Q08937 |
score: 80.1 |
e-value: 4e-15 |
Identity: 45.95% |
Span: 222bp (59.2%) |
Frame: 1 |
29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 |
Match: P19683 |
score: 79.3 |
e-value: 6e-15 |
Identity: 51.47% |
Span: 204bp (54.4%) |
Frame: 1 |
31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 |
Match: P49314 |
score: 79.3 |
e-value: 6e-15 |
Identity: 45.95% |
Span: 222bp (59.2%) |
Frame: 1 |
31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 |
Match: Q5RF83 |
score: 77.8 |
e-value: 2e-14 |
Identity: 49.32% |
Span: 219bp (58.4%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1 |
Match: Q14011 |
score: 77.8 |
e-value: 2e-14 |
Identity: 49.32% |
Span: 219bp (58.4%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1 |
Match: P60825 |
score: 77.4 |
e-value: 2e-14 |
Identity: 49.32% |
Span: 219bp (58.4%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1 |
Match: P60824 |
score: 77.4 |
e-value: 2e-14 |
Identity: 49.32% |
Span: 219bp (58.4%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1 |
Match: P60826 |
score: 77.4 |
e-value: 2e-14 |
Identity: 49.32% |
Span: 219bp (58.4%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1 |
Match: Q28IQ9 |
score: 76.6 |
e-value: 4e-14 |
Identity: 49.28% |
Span: 207bp (55.2%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 |
Match: Q9PTX2 |
score: 76.6 |
e-value: 4e-14 |
Identity: 50.72% |
Span: 207bp (55.2%) |
Frame: 1 |
Cold-inducible RNA-binding protein OS=Rana catesbeiana GN=cirbp PE=2 SV=1 |
Match: Q9ZUU4 |
score: 76.3 |
e-value: 5e-14 |
Identity: 47.76% |
Span: 201bp (53.6%) |
Frame: 1 |
Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1 |
Match: P19682 |
score: 75.5 |
e-value: 9e-14 |
Identity: 48.53% |
Span: 204bp (54.4%) |
Frame: 1 |
28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 |
Match: Q43349 |
score: 75.5 |
e-value: 9e-14 |
Identity: 47.76% |
Span: 201bp (53.6%) |
Frame: 1 |
29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2 |
Match: Q04836 |
score: 75.1 |
e-value: 1e-13 |
Identity: 47.06% |
Span: 204bp (54.4%) |
Frame: 1 |
31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1 |
|
20 lower scoring hits censored -- only 25 best hits are stored. |