| genbank/nr [blastx] | Showing best 51 hits recorded |
| Match: gi|22091415|gb|AAL69489.2| |
score: 70.09 |
e-value: 1.5e-20 |
Identity: 54.41% |
Span: 201bp (64.0%) |
Frame: 3 |
| putative RNA helicase [Arabidopsis thaliana] |
| Match: gi|9759460|dbj|BAB10376.1| |
score: 70.09 |
e-value: 1.4e-20 |
Identity: 54.41% |
Span: 201bp (64.0%) |
Frame: 3 |
| RNA helicase [Arabidopsis thaliana] |
| Match: gi|30697481|ref|NP_200922.2| |
score: 70.09 |
e-value: 1.4e-20 |
Identity: 54.41% |
Span: 201bp (64.0%) |
Frame: 3 |
| DEAD box RNA helicase, putative [Arabidopsis thaliana] |
| Match: gi|21955293|gb|AAL24152.2| |
score: 50.06 |
e-value: 1.7e-07 |
Identity: 37.5% |
Span: 213bp (67.8%) |
Frame: 3 |
| putative ATP-dependent RNA helicase [Arabidopsis thaliana] |
| Match: gi|15227913|ref|NP_181756.1| |
score: 50.06 |
e-value: 1.6e-07 |
Identity: 37.5% |
Span: 213bp (67.8%) |
Frame: 3 |
| U5 small nuclear ribonucleoprotein helicase, putative [Arabidopsis thaliana] >gi2673917|gb|AAB88651.1| putative ATP-d... |
| Match: gi|22091415|gb|AAL69489.2| |
score: 49.68 |
e-value: 1.5e-20 |
Identity: 74.19% |
Span: 93bp (29.6%) |
Frame: 2 |
| putative RNA helicase [Arabidopsis thaliana] |
| Match: gi|9759460|dbj|BAB10376.1| |
score: 49.68 |
e-value: 1.4e-20 |
Identity: 74.19% |
Span: 93bp (29.6%) |
Frame: 2 |
| RNA helicase [Arabidopsis thaliana] |
| Match: gi|30697481|ref|NP_200922.2| |
score: 49.68 |
e-value: 1.4e-20 |
Identity: 74.19% |
Span: 93bp (29.6%) |
Frame: 2 |
| DEAD box RNA helicase, putative [Arabidopsis thaliana] |
| Match: gi|15218086|ref|NP_173520.1| |
score: 43.9 |
e-value: 0.00013 |
Identity: 32.88% |
Span: 216bp (68.8%) |
Frame: 3 |
| emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-tr... |
| Match: gi|16930459|gb|AAL31915.1| |
score: 43.9 |
e-value: 0.00014 |
Identity: 32.88% |
Span: 216bp (68.8%) |
Frame: 3 |
| gi|16930459|gb|AAL31915.1| At1g20960/F9H16_5 [Arabidopsis thaliana] gi|21360465|gb|AAM47348.1| At1g20960/F9H16_5 [Ara... |
| Match: gi|30017579|gb|AAP13001.1| |
score: 42.74 |
e-value: 0.00017 |
Identity: 35.85% |
Span: 159bp (50.6%) |
Frame: 3 |
| putative Sec63 domain containing protein [Oryza sativa Japonica Group] >gi108711023|gb|ABF98818.1| U5 small nuclear r... |
| Match: gi|17861876|gb|AAL39415.1| |
score: 40.82 |
e-value: 0.001 |
Identity: 26.76% |
Span: 213bp (67.8%) |
Frame: 3 |
| gi|17861876|gb|AAL39415.1| GM09620p [Drosophila melanogaster] |
| Match: gi|28574898|ref|NP_648818.3| |
score: 40.82 |
e-value: 0.001 |
Identity: 26.76% |
Span: 213bp (67.8%) |
Frame: 3 |
| gi|28574898|ref|NP_648818.3| CG5931-PA [Drosophila melanogaster] gi|33112469|sp|Q9VUV9|U520_DROME Putative U5 small n... |
| Match: gi|32422881|ref|XP_331884.1| |
score: 40.43 |
e-value: 7.8e-05 |
Identity: 33.33% |
Span: 189bp (60.2%) |
Frame: 3 |
| gi|32422881|ref|XP_331884.1| hypothetical protein [Neurospora crassa] gi|28927267|gb|EAA36222.1| hypothetical protein... |
| Match: gi|24647182|ref|NP_650472.2| |
score: 39.28 |
e-value: 0.015 |
Identity: 33.9% |
Span: 165bp (52.5%) |
Frame: 3 |
| gi|24647182|ref|NP_650472.2| CG5205-PA [Drosophila melanogaster] gi|23171378|gb|AAF55204.2| CG5205-PA [Drosophila mel... |
| Match: gi|34853214|ref|XP_228345.2| |
score: 39.28 |
e-value: 0.015 |
Identity: 43.59% |
Span: 117bp (37.3%) |
Frame: 3 |
| gi|34853214|ref|XP_228345.2| similar to RNA helicase family [Rattus norvegicus] |
| Match: gi|38090459|ref|XP_125617.2| |
score: 38.89 |
e-value: 0.02 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|38090459|ref|XP_125617.2| RIKEN cDNA B630009I04 [Mus musculus] |
| Match: gi|21618977|gb|AAH32189.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|21618977|gb|AAH32189.1| B630009I04Rik protein [Mus musculus] |
| Match: gi|37590539|gb|AAH59917.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|37590539|gb|AAH59917.1| B630009I04Rik protein [Mus musculus] |
| Match: gi|31242349|ref|XP_321605.1| |
score: 38.51 |
e-value: 0.005 |
Identity: 28% |
Span: 150bp (47.8%) |
Frame: 3 |
| gi|31242349|ref|XP_321605.1| ENSANGP00000009625 [Anopheles gambiae] gi|21288557|gb|EAA00850.1| ENSANGP00000009625 [An... |
| Match: gi|38104023|gb|EAA50649.1| |
score: 37.74 |
e-value: 0.00028 |
Identity: 38.64% |
Span: 132bp (42.0%) |
Frame: 3 |
| gi|38104023|gb|EAA50649.1| hypothetical protein MG04408.4 [Magnaporthe grisea 70-15] |
| Match: gi|12061185|gb|AAG45474.1| |
score: 37.74 |
e-value: 0.044 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|12061185|gb|AAG45474.1| ASC-1 complex subunit P200 [Homo sapiens] |
| Match: gi|24307917|ref|NP_006819.1| |
score: 37.74 |
e-value: 0.044 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|24307917|ref|NP_006819.1| RNA helicase family; ASC-1 complex subunit P200 [Homo sapiens] gi|21740221|emb|CAD39122.... |
| Match: gi|2842424|emb|CAA11679.1| |
score: 37.74 |
e-value: 0.044 |
Identity: 50% |
Span: 102bp (32.5%) |
Frame: 3 |
| gi|2842424|emb|CAA11679.1| RNA helicase [Homo sapiens] |
| Match: gi|6321020|ref|NP_011099.1| |
score: 37.74 |
e-value: 0.044 |
Identity: 48.57% |
Span: 105bp (33.4%) |
Frame: 3 |
| gi|6321020|ref|NP_011099.1| RNA helicase-related protein required for pre-mRNA splicing; Snurp 246 kDa protein (Snurp... |
| Match: gi|31242979|ref|XP_321922.1| |
score: 36.58 |
e-value: 0.00079 |
Identity: 40.54% |
Span: 111bp (35.4%) |
Frame: 3 |
| gi|31242979|ref|XP_321922.1| ENSANGP00000013875 [Anopheles gambiae] gi|30173934|gb|EAA01788.2| ENSANGP00000013875 [An... |
| Match: gi|20521660|dbj|BAA34508.2| |
score: 36.19 |
e-value: 0.036 |
Identity: 25.71% |
Span: 210bp (66.9%) |
Frame: 3 |
| gi|20521660|dbj|BAA34508.2| KIAA0788 protein [Homo sapiens] |
| Match: gi|7770185|gb|AAF69628.1| |
score: 36.19 |
e-value: 0.04 |
Identity: 25.71% |
Span: 210bp (66.9%) |
Frame: 3 |
| gi|7770185|gb|AAF69628.1| PRO2281 [Homo sapiens] |
| Match: gi|5114047|gb|AAD40191.1| |
score: 36.19 |
e-value: 0.039 |
Identity: 25.71% |
Span: 210bp (66.9%) |
Frame: 3 |
| gi|5114047|gb|AAD40191.1| putative RNA helicase [Homo sapiens] |
| Match: gi|14043179|gb|AAH07577.1| |
score: 36.19 |
e-value: 0.037 |
Identity: 25.71% |
Span: 210bp (66.9%) |
Frame: 3 |
| gi|14043179|gb|AAH07577.1| Unknown (protein for IMAGE:3139787) [Homo sapiens] |
| Match: gi|37589012|gb|AAH01417.4| |
score: 36.19 |
e-value: 0.039 |
Identity: 25.71% |
Span: 210bp (66.9%) |
Frame: 3 |
| gi|37589012|gb|AAH01417.4| U5-200KD protein [Homo sapiens] |
| Match: gi|24307975|ref|NP_054733.1| |
score: 35.81 |
e-value: 0.047 |
Identity: 26% |
Span: 150bp (47.8%) |
Frame: 3 |
| gi|24307975|ref|NP_054733.1| U5 snRNP-specific protein, 200-KD [Homo sapiens] gi|10436768|dbj|BAB14906.1| unnamed pro... |
| Match: gi|17537127|ref|NP_496710.1| |
score: 33.88 |
e-value: 0.01 |
Identity: 34.78% |
Span: 135bp (43.0%) |
Frame: 3 |
| gi|17537127|ref|NP_496710.1| u5 small nuclear ribonucleoprotein helicase (2N18) [Caenorhabditis elegans] gi|12230659|... |
| Match: gi|38104023|gb|EAA50649.1| |
score: 26.56 |
e-value: 0.00028 |
Identity: 62.5% |
Span: 48bp (15.3%) |
Frame: 2 |
| gi|38104023|gb|EAA50649.1| hypothetical protein MG04408.4 [Magnaporthe grisea 70-15] |
| Match: gi|31242979|ref|XP_321922.1| |
score: 26.18 |
e-value: 0.00079 |
Identity: 62.5% |
Span: 48bp (15.3%) |
Frame: 2 |
| gi|31242979|ref|XP_321922.1| ENSANGP00000013875 [Anopheles gambiae] gi|30173934|gb|EAA01788.2| ENSANGP00000013875 [An... |
| Match: gi|32422881|ref|XP_331884.1| |
score: 25.79 |
e-value: 7.8e-05 |
Identity: 56.25% |
Span: 48bp (15.3%) |
Frame: 2 |
| gi|32422881|ref|XP_331884.1| hypothetical protein [Neurospora crassa] gi|28927267|gb|EAA36222.1| hypothetical protein... |
| Match: gi|21955293|gb|AAL24152.2| |
score: 25.41 |
e-value: 1.7e-07 |
Identity: 42.31% |
Span: 78bp (24.8%) |
Frame: 2 |
| putative ATP-dependent RNA helicase [Arabidopsis thaliana] |
| Match: gi|15227913|ref|NP_181756.1| |
score: 25.41 |
e-value: 1.6e-07 |
Identity: 42.31% |
Span: 78bp (24.8%) |
Frame: 2 |
| U5 small nuclear ribonucleoprotein helicase, putative [Arabidopsis thaliana] >gi2673917|gb|AAB88651.1| putative ATP-d... |
| Match: gi|17537127|ref|NP_496710.1| |
score: 25.02 |
e-value: 0.01 |
Identity: 50% |
Span: 54bp (17.2%) |
Frame: 2 |
| gi|17537127|ref|NP_496710.1| u5 small nuclear ribonucleoprotein helicase (2N18) [Caenorhabditis elegans] gi|12230659|... |
| Match: gi|30017579|gb|AAP13001.1| |
score: 22.33 |
e-value: 0.00017 |
Identity: 61.54% |
Span: 39bp (12.4%) |
Frame: 2 |
| putative Sec63 domain containing protein [Oryza sativa Japonica Group] >gi108711023|gb|ABF98818.1| U5 small nuclear r... |
| Match: gi|28574898|ref|NP_648818.3| |
score: 21.56 |
e-value: 0.001 |
Identity: 53.33% |
Span: 45bp (14.3%) |
Frame: 2 |
| gi|28574898|ref|NP_648818.3| CG5931-PA [Drosophila melanogaster] gi|33112469|sp|Q9VUV9|U520_DROME Putative U5 small n... |
| Match: gi|15218086|ref|NP_173520.1| |
score: 21.56 |
e-value: 0.00013 |
Identity: 50% |
Span: 48bp (15.3%) |
Frame: 2 |
| emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-tr... |
| Match: gi|17861876|gb|AAL39415.1| |
score: 21.56 |
e-value: 0.001 |
Identity: 53.33% |
Span: 45bp (14.3%) |
Frame: 2 |
| gi|17861876|gb|AAL39415.1| GM09620p [Drosophila melanogaster] |
| Match: gi|31242349|ref|XP_321605.1| |
score: 21.56 |
e-value: 0.005 |
Identity: 53.33% |
Span: 45bp (14.3%) |
Frame: 2 |
| gi|31242349|ref|XP_321605.1| ENSANGP00000009625 [Anopheles gambiae] gi|21288557|gb|EAA00850.1| ENSANGP00000009625 [An... |
| Match: gi|16930459|gb|AAL31915.1| |
score: 21.56 |
e-value: 0.00014 |
Identity: 50% |
Span: 48bp (15.3%) |
Frame: 2 |
| gi|16930459|gb|AAL31915.1| At1g20960/F9H16_5 [Arabidopsis thaliana] gi|21360465|gb|AAM47348.1| At1g20960/F9H16_5 [Ara... |
| Match: gi|24307975|ref|NP_054733.1| |
score: 20.79 |
e-value: 0.047 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|24307975|ref|NP_054733.1| U5 snRNP-specific protein, 200-KD [Homo sapiens] gi|10436768|dbj|BAB14906.1| unnamed pro... |
| Match: gi|20521660|dbj|BAA34508.2| |
score: 20.79 |
e-value: 0.036 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|20521660|dbj|BAA34508.2| KIAA0788 protein [Homo sapiens] |
| Match: gi|14043179|gb|AAH07577.1| |
score: 20.79 |
e-value: 0.037 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|14043179|gb|AAH07577.1| Unknown (protein for IMAGE:3139787) [Homo sapiens] |
| Match: gi|5114047|gb|AAD40191.1| |
score: 20.79 |
e-value: 0.039 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|5114047|gb|AAD40191.1| putative RNA helicase [Homo sapiens] |
| Match: gi|37589012|gb|AAH01417.4| |
score: 20.79 |
e-value: 0.039 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|37589012|gb|AAH01417.4| U5-200KD protein [Homo sapiens] |
| Match: gi|7770185|gb|AAF69628.1| |
score: 20.79 |
e-value: 0.04 |
Identity: 36.36% |
Span: 66bp (21.0%) |
Frame: 2 |
| gi|7770185|gb|AAF69628.1| PRO2281 [Homo sapiens] |
|
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At5g61140.1 |
score: 70.09 |
e-value: 3.7e-22 |
Identity: 54.41% |
Span: 201bp (64.0%) |
Frame: 3 |
| At5g61140.1 68412.m06940 DEAD box RNA helicase, putative similar to ASC-1 complex subunit P200 [Homo sapiens] GI:1206... |
| Match: At2g42270.1 |
score: 50.06 |
e-value: 4.1e-09 |
Identity: 37.5% |
Span: 213bp (67.8%) |
Frame: 3 |
| At2g42270.1 68409.m04729 U5 small nuclear ribonucleoprotein helicase, putative |
| Match: At5g61140.1 |
score: 49.68 |
e-value: 3.7e-22 |
Identity: 74.19% |
Span: 93bp (29.6%) |
Frame: 2 |
| At5g61140.1 68412.m06940 DEAD box RNA helicase, putative similar to ASC-1 complex subunit P200 [Homo sapiens] GI:1206... |
| Match: At1g20960.1 |
score: 43.9 |
e-value: 3.4e-06 |
Identity: 32.88% |
Span: 216bp (68.8%) |
Frame: 3 |
| At1g20960.1 68408.m02370 U5 small nuclear ribonucleoprotein helicase, putative similar to SP|O75643 U5 small nuclear ... |
| Match: At2g42270.1 |
score: 25.41 |
e-value: 4.1e-09 |
Identity: 42.31% |
Span: 78bp (24.8%) |
Frame: 2 |
| At2g42270.1 68409.m04729 U5 small nuclear ribonucleoprotein helicase, putative |
| Match: At1g20960.1 |
score: 21.56 |
e-value: 3.4e-06 |
Identity: 50% |
Span: 48bp (15.3%) |
Frame: 2 |
| At1g20960.1 68408.m02370 U5 small nuclear ribonucleoprotein helicase, putative similar to SP|O75643 U5 small nuclear ... |
|
