All Stored BLAST annotations for SGN-U449223
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157348154|emb|CAO22864.1| score: 336 e-value: 6e-90 Identity: 83.47% Span: 723bp (31.9%) Frame: 2
unnamed
Match: gi|15229825|ref|NP_190636.1| score: 319 e-value: 7e-85 Identity: 80.36% Span: 669bp (29.5%) Frame: 2
U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis...
Match: gi|84468434|dbj|BAE71300.1| score: 315 e-value: 1e-83 Identity: 82.43% Span: 714bp (31.5%) Frame: 2
putative U1 snRNP 70K protein [Trifolium pratense]
Match: gi|68036648|gb|AAY84878.1| score: 303 e-value: 4e-80 Identity: 76.34% Span: 669bp (29.5%) Frame: 2
U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Match: gi|115480914|ref|NP_001064050.1| score: 299 e-value: 8e-79 Identity: 76.11% Span: 669bp (29.5%) Frame: 2
Os10g0115600 [Oryza sativa (japonica cultivar-group)] >gi78707654|gb|ABB46629.1| transposon protein, putative, CACTA,...
Match: gi|87130529|gb|ABD23908.1| score: 299 e-value: 8e-79 Identity: 76.11% Span: 669bp (29.5%) Frame: 2
U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica Group]
Match: gi|14028993|gb|AAK52534.1|AC078891_3 score: 284 e-value: 3e-74 Identity: 67.72% Span: 669bp (29.5%) Frame: 2
Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica Group]
Match: gi|125530954|gb|EAY77519.1| score: 284 e-value: 3e-74 Identity: 67.72% Span: 669bp (29.5%) Frame: 2
hypothetical
Match: gi|49343272|gb|AAT64945.1| score: 281 e-value: 2e-73 Identity: 74.22% Span: 669bp (29.5%) Frame: 2
U1 snRNP [Zea mays] >gi49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Match: gi|30693345|ref|NP_850676.1| score: 216 e-value: 7e-54 Identity: 78.44% Span: 498bp (22.0%) Frame: 2
U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleotide binding [Arabidopsis thaliana] >gi1354466|g...
Match: gi|168015720|ref|XP_001760398.1| score: 196 e-value: 7e-48 Identity: 73.05% Span: 498bp (22.0%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162688412|gb|EDQ74789.1| predicted protein [Physcomitrella...
Match: gi|168061033|ref|XP_001782496.1| score: 194 e-value: 3e-47 Identity: 71.86% Span: 498bp (22.0%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162666049|gb|EDQ52715.1| predicted protein [Physcomitrella...
Match: gi|87130531|gb|ABD23909.1| score: 193 e-value: 6e-47 Identity: 72.19% Span: 498bp (22.0%) Frame: 2
U1 small nuclear ribonucleoprotein 70K splice variant 1 [Oryza sativa Japonica Group] >gi87130533|gb|ABD23910.1| U1 s...
Match: gi|162458369|ref|NP_001105268.1| score: 182 e-value: 1e-43 Identity: 71.43% Span: 498bp (22.0%) Frame: 2
U1 snRNP [Zea mays] >gi49343280|gb|AAT64947.1| U1 snRNP [Zea mays] >gi|49343293|gb|AAT64948.1| U1 snRNP [Zea mays]
Match: gi|159479638|ref|XP_001697897.1| score: 177 e-value: 3e-42 Identity: 47.08% Span: 654bp (28.8%) Frame: 2
U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii] >gi158273995|gb|EDO99780.1| U1 small nuclear ribonucle...
Match: gi|146197791|dbj|BAF57614.1| score: 171 e-value: 2e-40 Identity: 57.42% Span: 465bp (20.5%) Frame: 2
snRNP70K
Match: gi|109125535|ref|XP_001112732.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Match: gi|114678225|ref|XP_001156213.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
PREDICTED: hypothetical protein [Pan troglodytes]
Match: gi|36100|emb|CAA28352.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Match: gi|74140671|dbj|BAB29263.3| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
unnamed protein product [Mus musculus] >gi74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Match: gi|67846113|ref|NP_033250.3| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus] >gi|74221620|dbj|BAE21515.1| un...
Match: gi|149055933|gb|EDM07364.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
U1 small nuclear ribonucleoprotein polypeptide A (predicted), isoform CRA_c [Rattus norvegicus] >gi187469313|gb|AAI67...
Match: gi|119572837|gb|EAW52452.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen), isoform CRA_g [Homo sapiens]
Match: gi|29568103|ref|NP_003080.2| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa; small nuclear ribonucleoprotein 70kD polypept...
Match: gi|115496910|ref|NP_001069514.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus] >gi117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuc...
Match: gi|337445|gb|AAA36573.1| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen
Match: gi|73948009|ref|XP_541503.2| score: 170 e-value: 5e-40 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
gi|73948009|ref|XP_541503.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Canis familiaris]
Match: gi|158259701|dbj|BAF85809.1| score: 169 e-value: 1e-39 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
unnamed
Match: gi|156547263|ref|XP_001602052.1| score: 168 e-value: 2e-39 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
PREDICTED: similar to ENSANGP00000028567 [Nasonia vitripennis]
Match: gi|56118714|ref|NP_001008126.1| score: 167 e-value: 3e-39 Identity: 57.23% Span: 519bp (22.9%) Frame: 2
snrp70
Match: gi|108742141|gb|AAI17603.1| score: 167 e-value: 3e-39 Identity: 55.48% Span: 465bp (20.5%) Frame: 2
Snrp70
Match: gi|51468002|ref|NP_001003875.1| score: 167 e-value: 3e-39 Identity: 57.8% Span: 519bp (22.9%) Frame: 2
U1
Match: gi|194215756|ref|XP_001917325.1| score: 167 e-value: 3e-39 Identity: 61.01% Span: 477bp (21.0%) Frame: 2
PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K) [Equus caballus]
Match: gi|149462268|ref|XP_001517310.1| score: 167 e-value: 5e-39 Identity: 57.23% Span: 519bp (22.9%) Frame: 2
PREDICTED:
Match: gi|91078908|ref|XP_967303.1| score: 166 e-value: 1e-38 Identity: 55.48% Span: 465bp (20.5%) Frame: 2
PREDICTED:
Match: gi|50417136|gb|AAH77089.1| score: 166 e-value: 6e-39 Identity: 57.23% Span: 519bp (22.9%) Frame: 2
gi|50417136|gb|AAH77089.1| Snrp70 protein [Danio rerio]
Match: gi|602021|emb|CAA29961.1| score: 165 e-value: 1e-38 Identity: 60.76% Span: 474bp (20.9%) Frame: 2
gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Match: gi|51703882|gb|AAH81025.1| score: 161 e-value: 2e-37 Identity: 56.25% Span: 519bp (22.9%) Frame: 2
gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404) [Xenopus laevis]
Match: gi|66910786|gb|AAH97714.1| score: 161 e-value: 2e-37 Identity: 56.25% Span: 519bp (22.9%) Frame: 2
gi|66910786|gb|AAH97714.1| Unknown (protein for IMAGE:6871460) [Xenopus laevis]
Match: gi|134091|sp|P09406|RU17_XENLA score: 161 e-value: 2e-37 Identity: 56.25% Span: 519bp (22.9%) Frame: 2
gi|134091|sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K) gi|8586...
Match: gi|148225156|ref|NP_001081603.1| score: 161 e-value: 2e-37 Identity: 56.25% Span: 519bp (22.9%) Frame: 2
U1
Match: gi|193913679|gb|EDW12546.1| score: 159 e-value: 9e-37 Identity: 55.49% Span: 519bp (22.9%) Frame: 2
GI24161
Match: gi|110760725|ref|XP_623789.2| score: 158 e-value: 2e-36 Identity: 56.07% Span: 519bp (22.9%) Frame: 2
PREDICTED:
Match: gi|194190465|gb|EDX04041.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GD22521
Match: gi|194148927|gb|EDW64625.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GJ21434
Match: gi|194174194|gb|EDW87805.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GE18384
Match: gi|17137278|ref|NP_477205.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
gi|17137278|ref|NP_477205.1| small nuclear ribonucleoprotein 70K CG8749-PA [Drosophila melanogaster] gi|13638469|sp|P...
Match: gi|158315|gb|AAA28859.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
Match: gi|190661972|gb|EDV59164.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GG23559
Match: gi|194129900|gb|EDW51943.1| score: 156 e-value: 8e-36 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GM13669
Match: gi|190616089|gb|EDV31613.1| score: 155 e-value: 1e-35 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GF14460
Match: gi|763157|emb|CAA33777.1| score: 155 e-value: 1e-35 Identity: 70.59% Span: 357bp (15.7%) Frame: 2
gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus] >gi|13633918|sp|Q62376|RU17_MOUSE U1 small n...
Match: gi|193900040|gb|EDV98906.1| score: 155 e-value: 1e-35 Identity: 54.6% Span: 519bp (22.9%) Frame: 2
GH13577
Match: gi|125984041|ref|XP_001355785.1| score: 155 e-value: 1e-35 Identity: 54.91% Span: 519bp (22.9%) Frame: 2
GA21298-PA
Match: gi|193662169|ref|XP_001952270.1| score: 152 e-value: 2e-34 Identity: 51.61% Span: 465bp (20.5%) Frame: 2
PREDICTED:
Match: gi|194162515|gb|EDW77416.1| score: 152 e-value: 9e-35 Identity: 54.02% Span: 519bp (22.9%) Frame: 2
GK18098
Match: gi|158286893|ref|XP_565448.3| score: 151 e-value: 2e-34 Identity: 54.91% Span: 519bp (22.9%) Frame: 2
AGAP006755-PA
Match: gi|156371745|ref|XP_001628922.1| score: 151 e-value: 2e-34 Identity: 49.68% Span: 465bp (20.5%) Frame: 2
predicted
Match: gi|119174818|ref|XP_001239737.1| score: 150 e-value: 6e-34 Identity: 55% Span: 462bp (20.4%) Frame: 2
hypothetical
Match: gi|115926217|ref|XP_001193416.1| score: 149 e-value: 1e-33 Identity: 52.6% Span: 519bp (22.9%) Frame: 2
PREDICTED:
Match: gi|190588659|gb|EDV28681.1| score: 145 e-value: 1e-32 Identity: 52.02% Span: 519bp (22.9%) Frame: 2
hypothetical
Match: gi|124514052|ref|XP_001350382.1| score: 145 e-value: 1e-32 Identity: 47.74% Span: 465bp (20.5%) Frame: 2
u1
Match: gi|193657247|ref|XP_001947021.1| score: 145 e-value: 1e-32 Identity: 49.68% Span: 465bp (20.5%) Frame: 2
PREDICTED:
Match: gi|56757815|gb|AAW27048.1| score: 145 e-value: 2e-32 Identity: 47.74% Span: 465bp (20.5%) Frame: 2
gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Match: gi|322618|pir||S28147 score: 142 e-value: 2e-31 Identity: 66.34% Span: 303bp (13.4%) Frame: 2
gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Match: gi|82752588|ref|XP_727361.1| score: 142 e-value: 9e-32 Identity: 45.11% Span: 552bp (24.3%) Frame: 2
U1
Match: gi|66828257|ref|XP_647483.1| score: 141 e-value: 2e-31 Identity: 46.89% Span: 528bp (23.3%) Frame: 2
gi|66828257|ref|XP_647483.1| hypothetical protein DDB0189711 [Dictyostelium discoideum] >gi|60475520|gb|EAL73455.1| h...
Match: gi|156101519|ref|XP_001616453.1| score: 137 e-value: 3e-30 Identity: 43.59% Span: 468bp (20.6%) Frame: 2
U1
Match: gi|70953786|ref|XP_745972.1| score: 137 e-value: 3e-30 Identity: 45.11% Span: 552bp (24.3%) Frame: 2
gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi] >gi|56526457|emb|CAH8...
Match: gi|156085230|ref|XP_001610098.1| score: 137 e-value: 5e-30 Identity: 47.15% Span: 552bp (24.3%) Frame: 2
u1
Match: gi|119478256|ref|XP_001259339.1| score: 137 e-value: 5e-30 Identity: 50.31% Span: 468bp (20.6%) Frame: 2
U1
Match: gi|71030936|ref|XP_765110.1| score: 136 e-value: 9e-30 Identity: 44.04% Span: 552bp (24.3%) Frame: 2
U1
Match: gi|145542919|ref|XP_001457146.1| score: 135 e-value: 2e-29 Identity: 56.44% Span: 303bp (13.4%) Frame: 2
hypothetical
Match: gi|157774873|ref|XP_001665502.1| score: 135 e-value: 2e-29 Identity: 47.4% Span: 462bp (20.4%) Frame: 2
hypothetical
Match: gi|145538127|ref|XP_001454769.1| score: 135 e-value: 2e-29 Identity: 56.44% Span: 303bp (13.4%) Frame: 2
hypothetical
Match: gi|115637611|ref|XP_781203.2| score: 135 e-value: 1e-29 Identity: 63.56% Span: 354bp (15.6%) Frame: 2
PREDICTED:
Match: gi|84994904|ref|XP_952174.1| score: 134 e-value: 4e-29 Identity: 43.01% Span: 552bp (24.3%) Frame: 2
U1
Match: gi|145544312|ref|XP_001457841.1| score: 134 e-value: 2e-29 Identity: 57.43% Span: 303bp (13.4%) Frame: 2
hypothetical
Match: gi|169779457|ref|XP_001824193.1| score: 133 e-value: 7e-29 Identity: 48.73% Span: 459bp (20.2%) Frame: 2
hypothetical
Match: gi|154283073|ref|XP_001542332.1| score: 133 e-value: 6e-29 Identity: 47.17% Span: 459bp (20.2%) Frame: 2
predicted
Match: gi|115399498|ref|XP_001215338.1| score: 132 e-value: 1e-28 Identity: 61.32% Span: 303bp (13.4%) Frame: 2
conserved
Match: gi|67541466|ref|XP_664507.1| score: 131 e-value: 2e-28 Identity: 48.8% Span: 462bp (20.4%) Frame: 2
gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4] >gi|40739112|gb|EAA58302.1|...
Match: gi|145249558|ref|XP_001401118.1| score: 131 e-value: 2e-28 Identity: 49.69% Span: 468bp (20.6%) Frame: 2
hypothetical
Match: gi|25152876|ref|NP_498565.2| score: 130 e-value: 5e-28 Identity: 45.45% Span: 462bp (20.4%) Frame: 2
gi|25152876|ref|NP_498565.2| small nuclear ribonucleoprotein (rnp-7) [Caenorhabditis elegans] gi|20198850|gb|AAA62536...
Match: gi|121714030|ref|XP_001274626.1| score: 130 e-value: 4e-28 Identity: 50% Span: 459bp (20.2%) Frame: 2
U1
Match: gi|71021383|ref|XP_760922.1| score: 129 e-value: 8e-28 Identity: 60.4% Span: 303bp (13.4%) Frame: 2
gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521] >gi|46100873|gb|EAK86106.1| hypothe...
Match: gi|167517869|ref|XP_001743275.1| score: 127 e-value: 5e-27 Identity: 46.45% Span: 462bp (20.4%) Frame: 2
predicted
Match: gi|169864290|ref|XP_001838756.1| score: 126 e-value: 7e-27 Identity: 59.41% Span: 303bp (13.4%) Frame: 2
hypothetical
Match: gi|19114691|ref|NP_593779.1| score: 125 e-value: 2e-26 Identity: 38.85% Span: 471bp (20.8%) Frame: 2
gi|19114691|ref|NP_593779.1| putative U1 small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493123|pir||...
Match: gi|68064271|ref|XP_674124.1| score: 125 e-value: 1e-26 Identity: 48.06% Span: 387bp (17.1%) Frame: 2
gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei] >gi|56492466|emb|CAH97...
Match: gi|170099527|ref|XP_001880982.1| score: 122 e-value: 1e-25 Identity: 56.44% Span: 303bp (13.4%) Frame: 2
predicted
Match: gi|189199498|ref|XP_001936086.1| score: 121 e-value: 2e-25 Identity: 56.48% Span: 303bp (13.4%) Frame: 2
U1
Match: gi|30802167|gb|AAH51414.1| score: 119 e-value: 1e-24 Identity: 48.03% Span: 381bp (16.8%) Frame: 2
gi|30802167|gb|AAH51414.1| Similar to small nuclear ribonucleoprotein 70K [Mus musculus]
Match: gi|134106223|ref|XP_778122.1| score: 118 e-value: 2e-24 Identity: 54.46% Span: 303bp (13.4%) Frame: 2
hypothetical
Match: gi|58258329|ref|XP_566577.1| score: 118 e-value: 2e-24 Identity: 54.46% Span: 303bp (13.4%) Frame: 2
U1
Match: gi|149055931|gb|EDM07362.1| score: 117 e-value: 4e-24 Identity: 48.78% Span: 369bp (16.3%) Frame: 2
U1 small nuclear ribonucleoprotein polypeptide A (predicted), isoform CRA_b [Rattus norvegicus]
Match: gi|825725|emb|CAA29964.1| score: 117 e-value: 3e-24 Identity: 46.92% Span: 390bp (17.2%) Frame: 2
gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens]
Match: gi|157816921|ref|NP_001101953.1| score: 117 e-value: 3e-24 Identity: 46.92% Span: 390bp (17.2%) Frame: 2
U1
Match: gi|90076320|dbj|BAE87840.1| score: 116 e-value: 7e-24 Identity: 44.6% Span: 417bp (18.4%) Frame: 2
unnamed
Match: gi|70997103|ref|XP_753306.1| score: 115 e-value: 1e-23 Identity: 44.25% Span: 468bp (20.6%) Frame: 2
U1

151 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 4 hits recorded
Match: At3G50670.1 score: 319 e-value: 5e-87 Identity: 80.36% Span: 669bp (29.5%) Frame: 2
Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18837457-18840473 REVERSE
Match: At3G50670.2 score: 216 e-value: 5e-56 Identity: 78.44% Span: 498bp (22.0%) Frame: 2
Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18839213-18840473 REVERSE
Match: At2G43370.1 score: 91.7 e-value: 2e-18 Identity: 42.57% Span: 303bp (13.4%) Frame: 2
U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD
Match: At1G13180.1 score: 86.7 e-value: 6e-17 Identity: 89.13% Span: 138bp (6.1%) Frame: -3
Symbols: ARP3, ATARP3, DIS1 | DIS1 (DISTORTED TRICHOMES 1); structural constituent of cytoskeleton | chr1:4495391-44...