All Stored BLAST annotations for SGN-U571491
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157339221|emb|CAO43762.1| score: 530 e-value: 2e-148 Identity: 52.52% Span: 1647bp (86.7%) Frame: 1
unnamed
Match: gi|147865632|emb|CAN83254.1| score: 520 e-value: 2e-145 Identity: 52.85% Span: 1557bp (82.0%) Frame: 1
hypothetical protein [Vitis vinifera]
Match: gi|39840783|emb|CAD20832.1| score: 438 e-value: 9e-121 Identity: 50.89% Span: 1341bp (70.6%) Frame: 1
sigma factor [Spinacia oleracea]
Match: gi|2398853|dbj|BAA22215.1| score: 430 e-value: 3e-118 Identity: 50.54% Span: 1377bp (72.5%) Frame: 1
plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Match: gi|15232364|ref|NP_190960.1| score: 429 e-value: 4e-118 Identity: 50.76% Span: 1377bp (72.5%) Frame: 1
SIGC (RNA POLYMERASE SIGMA-SUBUNIT C); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor ...
Match: gi|7363220|emb|CAB83107.1| score: 420 e-value: 3e-115 Identity: 51.61% Span: 1302bp (68.6%) Frame: 1
sigma factor 3 [Sinapis alba]
Match: gi|22135904|gb|AAM91534.1| score: 365 e-value: 8e-99 Identity: 62.85% Span: 861bp (45.3%) Frame: 1
sigma factor SigC [Arabidopsis thaliana]
Match: gi|49328110|gb|AAT58808.1| score: 303 e-value: 4e-80 Identity: 37.9% Span: 1314bp (69.2%) Frame: 1
hypothetical protein [Oryza sativa Japonica Group]
Match: gi|47777365|gb|AAT37999.1| score: 303 e-value: 4e-80 Identity: 37.9% Span: 1314bp (69.2%) Frame: 1
putative RNA polymerase sigma factor [Oryza sativa Japonica Group]
Match: gi|218197356|gb|EEC79783.1| score: 300 e-value: 2e-79 Identity: 37.7% Span: 1314bp (69.2%) Frame: 1
hypothetical protein OsI_21197 [Oryza sativa Indica Group]
Match: gi|125595399|gb|EAZ35458.1| score: 295 e-value: 1e-77 Identity: 36.68% Span: 1314bp (69.2%) Frame: 1
hypothetical
Match: gi|162463525|ref|NP_001105185.1| score: 246 e-value: 4e-63 Identity: 34.44% Span: 1416bp (74.6%) Frame: 1
sigma factor protein [Zea mays] >gi20159761|gb|AAM12034.1| sigma factor protein [Zea mays]
Match: gi|148907004|gb|ABR16646.1| score: 236 e-value: 7e-60 Identity: 31.08% Span: 1272bp (67.0%) Frame: 1
unknown [Picea sitchensis]
Match: gi|148909485|gb|ABR17840.1| score: 236 e-value: 7e-60 Identity: 31.08% Span: 1272bp (67.0%) Frame: 1
unknown [Picea sitchensis]
Match: gi|26452898|dbj|BAC43527.1| score: 233 e-value: 4e-59 Identity: 32.58% Span: 1287bp (67.8%) Frame: 1
putative plastid RNA polymerase sigma-subunit SIG1 [Arabidopsis thaliana]
Match: gi|15223259|ref|NP_172330.1| score: 231 e-value: 2e-58 Identity: 33.03% Span: 1278bp (67.3%) Frame: 1
SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor ...
Match: gi|2353173|gb|AAB69385.1| score: 230 e-value: 4e-58 Identity: 33.03% Span: 1278bp (67.3%) Frame: 1
sigma factor 2 [Arabidopsis thaliana]
Match: gi|168012500|ref|XP_001758940.1| score: 230 e-value: 3e-58 Identity: 34.44% Span: 1062bp (55.9%) Frame: 1
plastid sigma facor SIG2 [Physcomitrella patens subsp. patens] >gi12697780|dbj|BAB21618.1| PpSIG2 [Physcomitrella pat...
Match: gi|115465761|ref|NP_001056480.1| score: 229 e-value: 7e-58 Identity: 37.28% Span: 1038bp (54.7%) Frame: 1
Os05g0589200
Match: gi|85813983|emb|CAD20831.2| score: 229 e-value: 5e-58 Identity: 31.92% Span: 1185bp (62.4%) Frame: 1
sigma factor [Spinacia oleracea]
Match: gi|168009564|ref|XP_001757475.1| score: 224 e-value: 2e-56 Identity: 32.54% Span: 1230bp (64.8%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162691169|gb|EDQ77532.1| predicted protein [Physcomitrella...
Match: gi|7363218|emb|CAB83106.1| score: 223 e-value: 6e-56 Identity: 34.36% Span: 1053bp (55.5%) Frame: 1
sigma factor 2 [Sinapis alba]
Match: gi|168009782|ref|XP_001757584.1| score: 218 e-value: 1e-54 Identity: 34.07% Span: 1068bp (56.2%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162691278|gb|EDQ77641.1| predicted protein [Physcomitrella...
Match: gi|125585746|gb|EAZ26410.1| score: 216 e-value: 8e-54 Identity: 32.7% Span: 1248bp (65.7%) Frame: 1
hypothetical protein OsJ_10293 [Oryza sativa Japonica Group]
Match: gi|115452175|ref|NP_001049688.1| score: 216 e-value: 8e-54 Identity: 32.7% Span: 1248bp (65.7%) Frame: 1
Os03g0271100 [Oryza sativa (japonica cultivar-group)] >gi29893614|gb|AAP06868.1| unknown protein [Oryza sativa Japoni...
Match: gi|125543279|gb|EAY89418.1| score: 214 e-value: 3e-53 Identity: 32.7% Span: 1248bp (65.7%) Frame: 1
hypothetical protein OsI_10924 [Oryza sativa Indica Group]
Match: gi|108707415|gb|ABF95210.1| score: 206 e-value: 6e-51 Identity: 35.91% Span: 894bp (47.1%) Frame: 1
Sigma-70 region 3 family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi215695353|dbj|BAG90544.1| unn...
Match: gi|162458864|ref|NP_001104924.1| score: 204 e-value: 2e-50 Identity: 31.21% Span: 1248bp (65.7%) Frame: 1
sigma-like
Match: gi|162458688|ref|NP_001104923.1| score: 204 e-value: 2e-50 Identity: 32.24% Span: 1086bp (57.2%) Frame: 1
sigma factor SIG2A [Zea mays] >gi4336606|gb|AAD17854.1| sigma factor SIG2A [Zea mays]
Match: gi|62701714|gb|AAX92787.1| score: 201 e-value: 1e-49 Identity: 32.69% Span: 1065bp (56.1%) Frame: 1
Sigma-70 region 3, putative [Oryza sativa Japonica Group] >gi108864350|gb|ABA93405.2| Sigma-70 region 3 family protei...
Match: gi|218194307|gb|EEC76734.1| score: 201 e-value: 2e-49 Identity: 32.96% Span: 1056bp (55.6%) Frame: 1
hypothetical protein OsI_14770 [Oryza sativa Indica Group]
Match: gi|62734062|gb|AAX96171.1| score: 201 e-value: 1e-49 Identity: 32.69% Span: 1065bp (56.1%) Frame: 1
Sigma-70 region 3, putative [Oryza sativa Japonica Group] >gi125589330|gb|EAZ29680.1| hypothetical protein OsJ_13741 ...
Match: gi|32351878|dbj|BAC78528.1| score: 199 e-value: 1e-48 Identity: 32.41% Span: 1065bp (56.1%) Frame: 1
plastid sigma factor 2A [Oryza sativa Japonica Group]
Match: gi|6273430|emb|CAB60192.1| score: 192 e-value: 7e-47 Identity: 31.23% Span: 1023bp (53.9%) Frame: 1
putative sigma-like transcription factor [Arabidopsis thaliana]
Match: gi|168000881|ref|XP_001753144.1| score: 192 e-value: 7e-47 Identity: 30.06% Span: 1026bp (54.0%) Frame: 1
predicted
Match: gi|18404292|ref|NP_565856.1| score: 192 e-value: 7e-47 Identity: 31.23% Span: 1023bp (53.9%) Frame: 1
SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor ...
Match: gi|170078618|ref|YP_001735256.1| score: 185 e-value: 1e-44 Identity: 30.42% Span: 996bp (52.4%) Frame: 1
RNA polymerase sigma factor [Synechococcus sp. PCC 7002] >gi558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] >...
Match: gi|1588486|prf||2208419B score: 185 e-value: 1e-44 Identity: 30.42% Span: 996bp (52.4%) Frame: 1
RNA polymerase sigma factor
Match: gi|119512308|ref|ZP_01631394.1| score: 185 e-value: 1e-44 Identity: 29.41% Span: 1071bp (56.4%) Frame: 1
RNA polymerase sigma factor [Nodularia spumigena CCY9414] >gi119463021|gb|EAW43972.1| RNA polymerase sigma factor [No...
Match: gi|186686393|ref|YP_001869589.1| score: 183 e-value: 4e-44 Identity: 29.44% Span: 1080bp (56.9%) Frame: 1
RNA polymerase sigma factor RpoD [Nostoc punctiforme PCC 73102] >gi8118663|gb|AAF73062.1|AF265349_1 primary vegetativ...
Match: gi|17232755|ref|NP_489303.1| score: 182 e-value: 1e-43 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
RNA polymerase sigma factor RpoD [Nostoc sp. PCC 7120] >gi75907632|ref|YP_321928.1| RNA polymerase sigma factor RpoD ...
Match: gi|196254343|ref|ZP_03152882.1| score: 181 e-value: 3e-43 Identity: 31.56% Span: 846bp (44.5%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD family [Cyanothece sp. PCC 7822] >gi196203540|gb|EDX98356.1| RNA polymerase, s...
Match: gi|218245044|ref|YP_002370415.1| score: 181 e-value: 2e-43 Identity: 29.34% Span: 1050bp (55.3%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD subfamily [Cyanothece sp. PCC 8801] >gi257058068|ref|YP_003135956.1| RNA polym...
Match: gi|218438948|ref|YP_002377277.1| score: 181 e-value: 3e-43 Identity: 31.56% Span: 846bp (44.5%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD subfamily [Cyanothece sp. PCC 7424] >gi218171676|gb|ACK70409.1| RNA polymerase...
Match: gi|119489756|ref|ZP_01622514.1| score: 181 e-value: 2e-43 Identity: 29.44% Span: 1080bp (56.9%) Frame: 1
RNA
Match: gi|196244885|ref|ZP_03143610.1| score: 181 e-value: 2e-43 Identity: 29.34% Span: 1050bp (55.3%) Frame: 1
RNA
Match: gi|196192415|gb|EDX87379.1| score: 180 e-value: 4e-43 Identity: 29.59% Span: 1014bp (53.4%) Frame: 1
RNA
Match: gi|209523577|ref|ZP_03272131.1| score: 179 e-value: 1e-42 Identity: 31.91% Span: 846bp (44.5%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD family [Arthrospira maxima CS-328] >gi209495982|gb|EDZ96283.1| RNA polymerase,...
Match: gi|196177205|gb|EDX72213.1| score: 177 e-value: 4e-42 Identity: 31.56% Span: 846bp (44.5%) Frame: 1
RNA
Match: gi|116058189|emb|CAL53378.1| score: 177 e-value: 4e-42 Identity: 32.77% Span: 879bp (46.3%) Frame: 1
SigA
Match: gi|81299460|ref|YP_399668.1| score: 177 e-value: 4e-42 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
Sigma-70
Match: gi|113478384|ref|YP_724445.1| score: 177 e-value: 2e-42 Identity: 31.91% Span: 846bp (44.5%) Frame: 1
RNA
Match: gi|56750888|ref|YP_171589.1| score: 177 e-value: 4e-42 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
gi|56750888|ref|YP_171589.1| principal RNA polymerase sigma factor RpoD1 [Synechococcus elongatus PCC 6301] >gi|56685...
Match: gi|217140|dbj|BAA01749.1| score: 177 e-value: 4e-42 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.]
Match: gi|78778882|ref|YP_396994.1| score: 176 e-value: 9e-42 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
Sigma-70
Match: gi|196242349|ref|ZP_03141103.1| score: 176 e-value: 9e-42 Identity: 31.56% Span: 846bp (44.5%) Frame: 1
RNA
Match: gi|157412913|ref|YP_001483779.1| score: 176 e-value: 9e-42 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
Putative
Match: gi|33861053|ref|NP_892614.1| score: 176 e-value: 5e-42 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
gi|33861053|ref|NP_892614.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus subsp. pastoris ...
Match: gi|123965795|ref|YP_001010876.1| score: 176 e-value: 7e-42 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
Putative
Match: gi|126695861|ref|YP_001090747.1| score: 175 e-value: 1e-41 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
Putative
Match: gi|145347899|ref|XP_001418397.1| score: 175 e-value: 1e-41 Identity: 33.33% Span: 846bp (44.5%) Frame: 1
predicted
Match: gi|123968088|ref|YP_001008946.1| score: 175 e-value: 1e-41 Identity: 30.11% Span: 837bp (44.1%) Frame: 1
Putative
Match: gi|158334991|ref|YP_001516163.1| score: 174 e-value: 2e-41 Identity: 31.21% Span: 846bp (44.5%) Frame: 1
RNA
Match: gi|72383665|ref|YP_293020.1| score: 174 e-value: 3e-41 Identity: 30.47% Span: 837bp (44.1%) Frame: 1
gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-...
Match: gi|157350681|emb|CAO40772.1| score: 174 e-value: 3e-41 Identity: 34.88% Span: 843bp (44.4%) Frame: 1
unnamed
Match: gi|124025264|ref|YP_001014380.1| score: 174 e-value: 3e-41 Identity: 30.47% Span: 837bp (44.1%) Frame: 1
Putative
Match: gi|157347351|emb|CAO17880.1| score: 174 e-value: 3e-41 Identity: 37.5% Span: 696bp (36.7%) Frame: 1
unnamed
Match: gi|197625355|gb|EDY37914.1| score: 174 e-value: 3e-41 Identity: 30.47% Span: 837bp (44.1%) Frame: 1
DNA-directed
Match: gi|86607034|ref|YP_475797.1| score: 173 e-value: 6e-41 Identity: 31.01% Span: 846bp (44.5%) Frame: 1
RNA
Match: gi|111023781|ref|YP_706753.1| score: 172 e-value: 1e-40 Identity: 29.06% Span: 1128bp (59.4%) Frame: 1
sigma
Match: gi|88807657|ref|ZP_01123169.1| score: 172 e-value: 1e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|118469122|ref|YP_887090.1| score: 172 e-value: 1e-40 Identity: 29.63% Span: 1101bp (58.0%) Frame: 1
RNA
Match: gi|33866315|ref|NP_897874.1| score: 172 e-value: 7e-41 Identity: 26.72% Span: 1038bp (54.7%) Frame: 1
gi|33866315|ref|NP_897874.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] gi|33639290|e...
Match: gi|148238947|ref|YP_001224334.1| score: 172 e-value: 1e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|113954073|ref|YP_731235.1| score: 172 e-value: 1e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|108799152|ref|YP_639349.1| score: 172 e-value: 1e-40 Identity: 33.56% Span: 849bp (44.7%) Frame: 1
RNA
Match: gi|126434760|ref|YP_001070451.1| score: 172 e-value: 1e-40 Identity: 33.56% Span: 849bp (44.7%) Frame: 1
RNA
Match: gi|87302644|ref|ZP_01085461.1| score: 172 e-value: 1e-40 Identity: 26.81% Span: 990bp (52.1%) Frame: 1
RNA
Match: gi|186685842|ref|YP_001869038.1| score: 171 e-value: 2e-40 Identity: 32.89% Span: 888bp (46.8%) Frame: 1
RNA
Match: gi|148241988|ref|YP_001227145.1| score: 171 e-value: 3e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|17231302|ref|NP_487850.1| score: 171 e-value: 2e-40 Identity: 31.88% Span: 888bp (46.8%) Frame: 1
gi|17231302|ref|NP_487850.1| group 2 sigma 70-type sigma factor D [Nostoc sp. PCC 7120] gi|25288482|pir||AC2282 group...
Match: gi|75908113|ref|YP_322409.1| score: 171 e-value: 2e-40 Identity: 32.21% Span: 888bp (46.8%) Frame: 1
RNA
Match: gi|170078438|ref|YP_001735076.1| score: 171 e-value: 3e-40 Identity: 31.42% Span: 882bp (46.4%) Frame: 1
sigma
Match: gi|37522141|ref|NP_925518.1| score: 171 e-value: 2e-40 Identity: 33.74% Span: 738bp (38.9%) Frame: 1
gi|37522141|ref|NP_925518.1| principal RNA polymerase sigma factor [Gloeobacter violaceus] gi|35213141|dbj|BAC90513.1...
Match: gi|87123878|ref|ZP_01079728.1| score: 171 e-value: 3e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
Sigma-70
Match: gi|116075287|ref|ZP_01472547.1| score: 171 e-value: 3e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|22298160|ref|NP_681407.1| score: 171 e-value: 2e-40 Identity: 31.36% Span: 846bp (44.5%) Frame: 1
gi|22298160|ref|NP_681407.1| principal RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] gi|22294339|d...
Match: gi|119511025|ref|ZP_01630145.1| score: 170 e-value: 5e-40 Identity: 32.55% Span: 888bp (46.8%) Frame: 1
RNA
Match: gi|116072877|ref|ZP_01470142.1| score: 170 e-value: 4e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
RNA
Match: gi|78212231|ref|YP_381010.1| score: 170 e-value: 4e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
gi|78212231|ref|YP_381010.1| Sigma-70 factor [Synechococcus sp. CC9605] >gi|78196690|gb|ABB34455.1| Sigma-70 factor [...
Match: gi|162458769|ref|NP_001105507.1| score: 170 e-value: 4e-40 Identity: 29.37% Span: 1101bp (58.0%) Frame: 1
sigma-like factor6 [Zea mays] >gi4336610|gb|AAD17856.1| sigma factor SIG6 [Zea mays]
Match: gi|126661338|ref|ZP_01732404.1| score: 170 e-value: 4e-40 Identity: 32.77% Span: 882bp (46.4%) Frame: 1
RNA
Match: gi|18477828|emb|CAC83737.1| score: 170 e-value: 4e-40 Identity: 28.8% Span: 1101bp (58.0%) Frame: 1
gi|18477828|emb|CAC83737.1| RNA polymerase sigma 70 [Rhodococcus fascians]
Match: gi|78185245|ref|YP_377680.1| score: 170 e-value: 4e-40 Identity: 29.75% Span: 837bp (44.1%) Frame: 1
gi|78185245|ref|YP_377680.1| Sigma-70 factor [Synechococcus sp. CC9902] >gi|78169539|gb|ABB26636.1| Sigma-70 factor [...
Match: gi|196190148|gb|EDX85112.1| score: 169 e-value: 1e-39 Identity: 33.1% Span: 843bp (44.4%) Frame: 1
RNA
Match: gi|33239946|ref|NP_874888.1| score: 169 e-value: 6e-40 Identity: 30.47% Span: 837bp (44.1%) Frame: 1
gi|33239946|ref|NP_874888.1| DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) [Prochlorococcus marinus sub...
Match: gi|170077819|ref|YP_001734457.1| score: 169 e-value: 1e-39 Identity: 33.11% Span: 882bp (46.4%) Frame: 1
sigma-70
Match: gi|196244562|ref|ZP_03143288.1| score: 169 e-value: 6e-40 Identity: 30.89% Span: 933bp (49.1%) Frame: 1
RNA
Match: gi|120403451|ref|YP_953280.1| score: 169 e-value: 6e-40 Identity: 33.56% Span: 849bp (44.7%) Frame: 1
RNA
Match: gi|159903037|ref|YP_001550381.1| score: 169 e-value: 6e-40 Identity: 30.82% Span: 837bp (44.1%) Frame: 1
Putative

150 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 6 hits recorded
Match: At3G53920.1 score: 429 e-value: 3e-120 Identity: 50.76% Span: 1377bp (72.5%) Frame: 1
Symbols: SIG3, SIGC | SIGC (RNA polymerase sigma subunit C); DNA binding / DNA-directed RNA polymerase/ transcriptio...
Match: At1G08540.1 score: 231 e-value: 1e-60 Identity: 33.03% Span: 1278bp (67.3%) Frame: 1
Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |...
Match: At2G36990.1 score: 192 e-value: 5e-49 Identity: 31.23% Span: 1023bp (53.9%) Frame: 1
Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio...
Match: At5G13730.1 score: 137 e-value: 2e-32 Identity: 30.71% Span: 840bp (44.2%) Frame: 1
Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:...
Match: At1G64860.1 score: 106 e-value: 4e-23 Identity: 26.83% Span: 834bp (43.9%) Frame: 1
Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip...
Match: At5G24120.1 score: 106 e-value: 4e-23 Identity: 26.8% Span: 1062bp (55.9%) Frame: 1
Symbols: SIG5, SIGE | SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor...

swissprot [blastx] Showing best 100 hits recorded
Match: P26683 score: 182 e-value: 8e-45 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Anabaena sp. (strain PCC 7120) GN=rpoD PE=3 SV=1
Match: P38023 score: 177 e-value: 2e-43 Identity: 32.27% Span: 846bp (44.5%) Frame: 1
RNA polymerase sigma factor rpoD1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpoD1
Match: P0A603 score: 166 e-value: 4e-40 Identity: 32.53% Span: 849bp (44.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycobacterium bovis GN=rpoD PE=3 SV=1
Match: P0A602 score: 166 e-value: 4e-40 Identity: 32.53% Span: 849bp (44.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycobacterium tuberculosis GN=rpoD PE=3 SV=1
Match: P77994 score: 164 e-value: 2e-39 Identity: 29.13% Span: 951bp (50.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Thermotoga maritima GN=rpoD PE=1 SV=3
Match: P74565 score: 160 e-value: 3e-38 Identity: 27.92% Span: 924bp (48.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Synechocystis sp. (strain PCC 6803) GN=rpoD PE=3 SV=1
Match: P77951 score: 159 e-value: 7e-38 Identity: 32.93% Span: 747bp (39.3%) Frame: 1
RNA polymerase principal sigma factor hrdB OS=Streptomyces griseus GN=hrdB PE=1 SV=1
Match: P18183 score: 159 e-value: 7e-38 Identity: 32.93% Span: 747bp (39.3%) Frame: 1
RNA polymerase principal sigma factor hrdB OS=Streptomyces coelicolor GN=hrdB PE=3 SV=2
Match: P52323 score: 157 e-value: 3e-37 Identity: 26.35% Span: 1287bp (67.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Borrelia burgdorferi GN=rpoD PE=3 SV=2
Match: P52322 score: 157 e-value: 2e-37 Identity: 27.73% Span: 984bp (51.8%) Frame: 1
RNA polymerase sigma factor rpoD1 OS=Microcystis aeruginosa GN=rpoD1 PE=3 SV=1
Match: Q9Z7F0 score: 154 e-value: 2e-36 Identity: 26.34% Span: 1128bp (59.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia pneumoniae GN=rpoD PE=3 SV=1
Match: Q59996 score: 153 e-value: 3e-36 Identity: 31.8% Span: 762bp (40.1%) Frame: 1
Probable RNA polymerase sigma-C factor OS=Synechocystis sp. (strain PCC 6803) GN=sigC PE=3 SV=1
Match: P52331 score: 153 e-value: 4e-36 Identity: 33.04% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Listeria monocytogenes GN=rpoD PE=3 SV=1
Match: Q92BQ6 score: 153 e-value: 4e-36 Identity: 33.04% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Listeria innocua GN=rpoD PE=3 SV=1
Match: Q9ZMY3 score: 152 e-value: 6e-36 Identity: 26.79% Span: 1134bp (59.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Helicobacter pylori J99 GN=rpoD PE=3 SV=1
Match: P17531 score: 152 e-value: 5e-36 Identity: 26.07% Span: 1218bp (64.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Myxococcus xanthus GN=rpoD PE=3 SV=1
Match: P18333 score: 152 e-value: 8e-36 Identity: 28.57% Span: 1128bp (59.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia trachomatis GN=rpoD PE=3 SV=2
Match: P56835 score: 152 e-value: 8e-36 Identity: 34.47% Span: 705bp (37.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia muridarum GN=rpoD PE=3 SV=1
Match: P55993 score: 152 e-value: 5e-36 Identity: 26.18% Span: 1143bp (60.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Helicobacter pylori GN=rpoD PE=3 SV=1
Match: P61540 score: 151 e-value: 1e-35 Identity: 26.86% Span: 1086bp (57.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpoD ...
Match: P18182 score: 151 e-value: 1e-35 Identity: 31.58% Span: 741bp (39.0%) Frame: 1
RNA polymerase principal sigma factor hrdA OS=Streptomyces coelicolor GN=hrdA PE=3 SV=2
Match: P59117 score: 151 e-value: 1e-35 Identity: 26.86% Span: 1086bp (57.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Leptospira interrogans GN=rpoD PE=3 SV=1
Match: P52329 score: 151 e-value: 1e-35 Identity: 33.04% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Enterococcus faecalis GN=rpoD PE=3 SV=2
Match: Q5HNY7 score: 150 e-value: 2e-35 Identity: 31.14% Span: 852bp (44.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpoD PE=3 SV=1
Match: P06224 score: 150 e-value: 2e-35 Identity: 33.03% Span: 663bp (34.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus subtilis GN=sigA PE=1 SV=2
Match: P27785 score: 150 e-value: 2e-35 Identity: 30.86% Span: 807bp (42.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptomyces aureofaciens GN=rpoD PE=3 SV=1
Match: Q8CP24 score: 150 e-value: 2e-35 Identity: 31.14% Span: 852bp (44.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpoD PE=3 SV=1
Match: P0A0I9 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MW2) GN=rpoD PE=3 SV=1
Match: P0A0I8 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpoD PE=1 SV=1
Match: Q99TT5 score: 149 e-value: 4e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain N315) GN=rpoD PE=1 SV=1
Match: Q5HFJ9 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain COL) GN=rpoD PE=3 SV=1
Match: Q6GGD8 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MRSA252) GN=rpoD PE=3 SV=1
Match: P0A0J0 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain NCTC 8325) GN=rpoD PE=3 SV=1
Match: Q6G905 score: 149 e-value: 5e-35 Identity: 31.67% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MSSA476) GN=rpoD PE=3 SV=1
Match: P26480 score: 149 e-value: 5e-35 Identity: 27.27% Span: 846bp (44.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas aeruginosa GN=rpoD PE=3 SV=1
Match: P52328 score: 149 e-value: 4e-35 Identity: 33.03% Span: 663bp (34.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus sp. GN=sigA PE=3 SV=1
Match: P33656 score: 149 e-value: 4e-35 Identity: 30.68% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Clostridium acetobutylicum GN=rpoD PE=3 SV=1
Match: O83506 score: 148 e-value: 9e-35 Identity: 24.94% Span: 1152bp (60.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Treponema pallidum GN=rpoD PE=3 SV=1
Match: O66381 score: 148 e-value: 9e-35 Identity: 28.57% Span: 840bp (44.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus halodurans GN=sigA PE=3 SV=2
Match: Q04506 score: 147 e-value: 2e-34 Identity: 30.97% Span: 678bp (35.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Lactococcus lactis subsp. lactis GN=rpoD
Match: Q03065 score: 147 e-value: 3e-34 Identity: 30.92% Span: 786bp (41.4%) Frame: 1
RNA polymerase sigma-B factor OS=Anabaena sp. (strain PCC 7120) GN=sigB PE=3 SV=1
Match: P52325 score: 146 e-value: 5e-34 Identity: 28.62% Span: 837bp (44.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Neisseria gonorrhoeae GN=rpoD
Match: P33118 score: 146 e-value: 4e-34 Identity: 30% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma factor sigB OS=Corynebacterium diphtheriae GN=sigB PE=3 SV=2
Match: Q92FZ8 score: 146 e-value: 4e-34 Identity: 27.1% Span: 1206bp (63.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia conorii GN=rpoD
Match: P0A4J0 score: 146 e-value: 4e-34 Identity: 30.42% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpoD PE=3 SV=1
Match: P0A4I9 score: 146 e-value: 4e-34 Identity: 30.42% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae GN=rpoD PE=3 SV=1
Match: Q87DT7 score: 145 e-value: 6e-34 Identity: 31.25% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpoD
Match: O33662 score: 145 e-value: 6e-34 Identity: 30.42% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus mutans GN=rpoD PE=3 SV=1
Match: Q9PDM9 score: 145 e-value: 6e-34 Identity: 31.25% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xylella fastidiosa GN=rpoD
Match: Q83BB6 score: 145 e-value: 8e-34 Identity: 25% Span: 1023bp (53.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Coxiella burnetii GN=rpoD
Match: Q4UJT1 score: 145 e-value: 8e-34 Identity: 26.81% Span: 1206bp (63.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia felis GN=rpoD
Match: P32001 score: 144 e-value: 2e-33 Identity: 28.06% Span: 903bp (47.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpoD PE=3 SV=1
Match: Q68VQ5 score: 144 e-value: 2e-33 Identity: 26.62% Span: 1206bp (63.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia typhi GN=rpoD
Match: P58290 score: 144 e-value: 1e-33 Identity: 30.53% Span: 678bp (35.7%) Frame: 1
RNA polymerase sigma factor rpoD (Fragment) OS=Lactococcus lactis subsp. cremoris GN=rpoD
Match: P43766 score: 144 e-value: 2e-33 Identity: 31.7% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Haemophilus influenzae GN=rpoD PE=3 SV=1
Match: P33451 score: 144 e-value: 1e-33 Identity: 26.62% Span: 1206bp (63.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia prowazekii GN=rpoD
Match: Q03066 score: 144 e-value: 2e-33 Identity: 27.51% Span: 1125bp (59.2%) Frame: 1
RNA polymerase sigma-C factor OS=Anabaena sp. (strain PCC 7120) GN=sigC PE=3 SV=2
Match: Q8PG33 score: 143 e-value: 3e-33 Identity: 30.45% Span: 717bp (37.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xanthomonas axonopodis pv. citri GN=rpoD
Match: Q8P4H2 score: 142 e-value: 5e-33 Identity: 31.25% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xanthomonas campestris pv. campestris GN=rpoD
Match: P46400 score: 142 e-value: 5e-33 Identity: 27.47% Span: 807bp (42.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rhodobacter capsulatus GN=rpoD PE=2 SV=1
Match: Q59753 score: 141 e-value: 1e-32 Identity: 31.25% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rhizobium meliloti GN=rpoD PE=3 SV=1
Match: P33452 score: 141 e-value: 1e-32 Identity: 31.25% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpoD PE=3 SV=2
Match: Q1RKH7 score: 141 e-value: 1e-32 Identity: 26.32% Span: 1206bp (63.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia bellii (strain RML369-C) GN=rpoD
Match: P52324 score: 141 e-value: 1e-32 Identity: 30.8% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Caulobacter crescentus GN=rpoD PE=3 SV=1
Match: P18249 score: 140 e-value: 2e-32 Identity: 30.14% Span: 831bp (43.8%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces coelicolor GN=hrdD
Match: P52326 score: 140 e-value: 2e-32 Identity: 24.86% Span: 1083bp (57.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas fluorescens GN=rpoD PE=3 SV=1
Match: Q60012 score: 138 e-value: 1e-31 Identity: 30.25% Span: 714bp (37.6%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces viridifaciens GN=hrdD
Match: P57163 score: 138 e-value: 1e-31 Identity: 26.74% Span: 1050bp (55.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpoD PE=3 SV=1
Match: O24744 score: 137 e-value: 2e-31 Identity: 28.35% Span: 780bp (41.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Shewanella violacea GN=rpoD PE=3 SV=1
Match: P52327 score: 137 e-value: 2e-31 Identity: 27.74% Span: 810bp (42.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas putida GN=rpoD
Match: P0A2E3 score: 137 e-value: 2e-31 Identity: 29.15% Span: 798bp (42.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Salmonella typhimurium GN=rpoD PE=3 SV=1
Match: P0A2E4 score: 137 e-value: 2e-31 Identity: 29.15% Span: 798bp (42.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Salmonella typhi GN=rpoD PE=3 SV=1
Match: P18184 score: 137 e-value: 3e-31 Identity: 26.97% Span: 723bp (38.1%) Frame: 1
RNA polymerase principal sigma factor hrdC OS=Streptomyces coelicolor GN=hrdC PE=3 SV=1
Match: P00579 score: 136 e-value: 4e-31 Identity: 29.15% Span: 798bp (42.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Escherichia coli (strain K12) GN=rpoD PE=1 SV=2
Match: Q59914 score: 135 e-value: 1e-30 Identity: 29.88% Span: 723bp (38.1%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces griseus GN=hrdD
Match: Q89B10 score: 133 e-value: 3e-30 Identity: 26.05% Span: 1050bp (55.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpoD PE=3 SV=1
Match: P45684 score: 132 e-value: 9e-30 Identity: 30.36% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Pseudomonas aeruginosa GN=rpoS
Match: O51804 score: 129 e-value: 6e-29 Identity: 29.46% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Vibrio cholerae GN=rpoS
Match: P47765 score: 127 e-value: 3e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Yersinia enterocolitica GN=rpoS PE=3 SV=1
Match: P47491 score: 126 e-value: 4e-28 Identity: 31.06% Span: 684bp (36.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycoplasma genitalium GN=rpoD
Match: P35540 score: 126 e-value: 5e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Shigella flexneri GN=rpoS PE=3 SV=3
Match: P13445 score: 126 e-value: 5e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Escherichia coli (strain K12) GN=rpoS
Match: P0A2E5 score: 126 e-value: 5e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Salmonella typhimurium GN=rpoS PE=3 SV=1
Match: P0A2E7 score: 126 e-value: 5e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Salmonella dublin GN=rpoS PE=3 SV=1
Match: P0A2E6 score: 126 e-value: 5e-28 Identity: 29.02% Span: 672bp (35.4%) Frame: 1
RNA polymerase sigma factor rpoS OS=Salmonella typhi GN=rpoS PE=3 SV=1
Match: Q9KI19 score: 124 e-value: 2e-27 Identity: 25.68% Span: 870bp (45.8%) Frame: 1
RNA polymerase sigma factor rpoS OS=Coxiella burnetii GN=rpoS PE=1 SV=1
Match: P78022 score: 123 e-value: 3e-27 Identity: 29.75% Span: 705bp (37.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycoplasma pneumoniae GN=rpoD
Match: P43344 score: 123 e-value: 4e-27 Identity: 30.65% Span: 597bp (31.4%) Frame: 1
RNA polymerase sigma factor rpoD (Fragment) OS=Serratia marcescens GN=rpoD PE=3 SV=1
Match: P50508 score: 89.7 e-value: 5e-17 Identity: 26.89% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma-32 factor OS=Enterobacter cloacae GN=rpoH
Match: P11539 score: 87.4 e-value: 3e-16 Identity: 27.65% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma-32 factor OS=Citrobacter freundii GN=rpoH
Match: P50510 score: 87 e-value: 3e-16 Identity: 27.06% Span: 723bp (38.1%) Frame: 1
RNA polymerase sigma-32 factor OS=Serratia marcescens GN=rpoH
Match: P50511 score: 85.5 e-value: 1e-15 Identity: 25.57% Span: 723bp (38.1%) Frame: 1
RNA polymerase sigma-32 factor OS=Vibrio cholerae GN=rpoH
Match: P50509 score: 84.7 e-value: 2e-15 Identity: 29.41% Span: 723bp (38.1%) Frame: 1
RNA polymerase sigma-32 factor OS=Proteus mirabilis GN=rpoH
Match: P50512 score: 84 e-value: 3e-15 Identity: 25.75% Span: 669bp (35.2%) Frame: 1
RNA polymerase sigma-32 factor OS=Zymomonas mobilis GN=rpoH
Match: P0AGB5 score: 84 e-value: 3e-15 Identity: 26.52% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma-32 factor OS=Escherichia coli O157:H7 GN=rpoH
Match: P0AGB4 score: 84 e-value: 3e-15 Identity: 26.52% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma-32 factor OS=Escherichia coli O6 GN=rpoH
Match: P0AGB3 score: 84 e-value: 3e-15 Identity: 26.52% Span: 750bp (39.5%) Frame: 1
RNA polymerase sigma-32 factor OS=Escherichia coli (strain K12) GN=rpoH
Match: P26764 score: 82.8 e-value: 6e-15 Identity: 25.1% Span: 735bp (38.7%) Frame: 1
RNA polymerase sigma-F factor OS=Bacillus licheniformis GN=sigF
Match: Q8DD54 score: 82.4 e-value: 8e-15 Identity: 24.45% Span: 768bp (40.4%) Frame: 1
RNA polymerase sigma-32 factor OS=Vibrio vulnificus GN=rpoH
Match: O05385 score: 77 e-value: 3e-13 Identity: 23.75% Span: 744bp (39.2%) Frame: 1
RNA polymerase sigma-32 factor OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpoH

9 lower scoring hits censored -- only 100 best hits are stored.