| genbank/nr [blastx] | Showing best 71 hits recorded |
| Match: gi|147803358|emb|CAN68836.1| |
score: 313 |
e-value: 4e-83 |
Identity: 92.77% |
Span: 498bp (27.5%) |
Frame: -2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157355205|emb|CAO48581.1| |
score: 313 |
e-value: 4e-83 |
Identity: 92.77% |
Span: 498bp (27.5%) |
Frame: -2 |
| unnamed |
| Match: gi|168022364|ref|XP_001763710.1| |
score: 313 |
e-value: 2e-83 |
Identity: 92.17% |
Span: 498bp (27.5%) |
Frame: -2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162685203|gb|EDQ71600.1| predicted protein [Physcomitrella... |
| Match: gi|168046548|ref|XP_001775735.1| |
score: 313 |
e-value: 2e-83 |
Identity: 92.17% |
Span: 498bp (27.5%) |
Frame: -2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672887|gb|EDQ59418.1| predicted protein [Physcomitrella... |
| Match: gi|157356703|emb|CAO62898.1| |
score: 310 |
e-value: 2e-82 |
Identity: 90.36% |
Span: 498bp (27.5%) |
Frame: -2 |
| unnamed |
| Match: gi|15223304|ref|NP_174556.1| |
score: 307 |
e-value: 2e-81 |
Identity: 90.36% |
Span: 498bp (27.5%) |
Frame: -2 |
| RNA-binding protein, putative [Arabidopsis thaliana] >gi6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thali... |
| Match: gi|50725622|dbj|BAD33089.1| |
score: 306 |
e-value: 5e-81 |
Identity: 89.76% |
Span: 498bp (27.5%) |
Frame: -2 |
| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] >gi182375457|dbj|BAG24017.1| RNA-binding protein [Or... |
| Match: gi|50725623|dbj|BAD33090.1| |
score: 306 |
e-value: 5e-81 |
Identity: 89.76% |
Span: 498bp (27.5%) |
Frame: -2 |
| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] |
| Match: gi|115474513|ref|NP_001060853.1| |
score: 306 |
e-value: 5e-81 |
Identity: 89.76% |
Span: 498bp (27.5%) |
Frame: -2 |
| Os08g0116400 [Oryza sativa (japonica cultivar-group)] >gi113622822|dbj|BAF22767.1| Os08g0116400 [Oryza sativa Japonic... |
| Match: gi|14030687|gb|AAK53018.1|AF375434_1 |
score: 302 |
e-value: 5e-80 |
Identity: 89.16% |
Span: 498bp (27.5%) |
Frame: -2 |
| At1g32790 [Arabidopsis thaliana] >gi25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana] |
| Match: gi|116781618|gb|ABK22180.1| |
score: 299 |
e-value: 4e-79 |
Identity: 87.95% |
Span: 498bp (27.5%) |
Frame: -2 |
| unknown [Picea sitchensis] |
| Match: gi|79319100|ref|NP_001031131.1| |
score: 296 |
e-value: 3e-78 |
Identity: 89.51% |
Span: 486bp (26.9%) |
Frame: -2 |
| CID11; |
| Match: gi|15235177|ref|NP_192799.1| |
score: 296 |
e-value: 9e-101 |
Identity: 87.35% |
Span: 498bp (27.5%) |
Frame: -2 |
| CID12; RNA binding [Arabidopsis thaliana] >gi4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pf... |
| Match: gi|1174153|gb|AAA86641.1| |
score: 292 |
e-value: 7e-77 |
Identity: 87.2% |
Span: 492bp (27.2%) |
Frame: -2 |
| RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|125559945|gb|EAZ05393.1| |
score: 288 |
e-value: 8e-76 |
Identity: 88.61% |
Span: 474bp (26.2%) |
Frame: -2 |
| hypothetical |
| Match: gi|125601987|gb|EAZ41312.1| |
score: 288 |
e-value: 8e-76 |
Identity: 88.61% |
Span: 474bp (26.2%) |
Frame: -2 |
| hypothetical |
| Match: gi|79325059|ref|NP_001031614.1| |
score: 285 |
e-value: 2e-97 |
Identity: 86.88% |
Span: 480bp (26.5%) |
Frame: -2 |
| RBP37 |
| Match: gi|15229132|ref|NP_190508.1| |
score: 280 |
e-value: 3e-73 |
Identity: 81.33% |
Span: 498bp (27.5%) |
Frame: -2 |
| gi|15229132|ref|NP_190508.1| RNA-binding protein, putative [Arabidopsis thaliana] gi|11358815|pir||T45844 RNA-binding... |
| Match: gi|110737686|dbj|BAF00782.1| |
score: 278 |
e-value: 8e-73 |
Identity: 81.33% |
Span: 498bp (27.5%) |
Frame: -2 |
| RNA-binding |
| Match: gi|157357096|emb|CAO63584.1| |
score: 277 |
e-value: 1e-83 |
Identity: 80.72% |
Span: 498bp (27.5%) |
Frame: -2 |
| unnamed |
| Match: gi|51969708|dbj|BAD43546.1| |
score: 276 |
e-value: 1e-81 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| putative RNA-binding protein [Arabidopsis thaliana] >gi51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabido... |
| Match: gi|15220902|ref|NP_175769.1| |
score: 276 |
e-value: 2e-82 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] >gi12324022|gb|AAG51971.1|AC024... |
| Match: gi|79319864|ref|NP_001031182.1| |
score: 276 |
e-value: 1e-81 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|115435208|ref|NP_001042362.1| |
score: 273 |
e-value: 7e-85 |
Identity: 81.33% |
Span: 498bp (27.5%) |
Frame: -2 |
| Os01g0209400 [Oryza sativa (japonica cultivar-group)] >gi56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sa... |
| Match: gi|15231858|ref|NP_188063.1| |
score: 273 |
e-value: 4e-83 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| CID9 (CTC-Interacting Domain 9); RNA binding / protein binding [Arabidopsis thaliana] >gi11994215|dbj|BAB01337.1| unn... |
| Match: gi|8671859|gb|AAF78422.1|AC018748_1 |
score: 265 |
e-value: 8e-78 |
Identity: 78.88% |
Span: 483bp (26.7%) |
Frame: -2 |
| Contains similarity to RNA-binding protein from Arabidopsis thaliana gi2129727 and contains RNA recognition PF|00076 ... |
| Match: gi|147804944|emb|CAN62612.1| |
score: 263 |
e-value: 5e-68 |
Identity: 89.93% |
Span: 417bp (23.0%) |
Frame: -2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|125538774|gb|EAY85169.1| |
score: 263 |
e-value: 4e-68 |
Identity: 71.12% |
Span: 546bp (30.2%) |
Frame: -2 |
| hypothetical |
| Match: gi|125581461|gb|EAZ22392.1| |
score: 263 |
e-value: 4e-68 |
Identity: 71.12% |
Span: 546bp (30.2%) |
Frame: -2 |
| hypothetical |
| Match: gi|115445273|ref|NP_001046416.1| |
score: 263 |
e-value: 4e-68 |
Identity: 71.12% |
Span: 546bp (30.2%) |
Frame: -2 |
| Os02g0244600 |
| Match: gi|62867578|emb|CAI84654.1| |
score: 263 |
e-value: 4e-71 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| hypothetical protein [Nicotiana tabacum] |
| Match: gi|15238531|ref|NP_197832.1| |
score: 251 |
e-value: 1e-64 |
Identity: 71.69% |
Span: 498bp (27.5%) |
Frame: -2 |
| gi|15238531|ref|NP_197832.1| RNA-binding protein, putative [Arabidopsis thaliana] gi|9758532|dbj|BAB08927.1| RNA-bind... |
| Match: gi|125597492|gb|EAZ37272.1| |
score: 245 |
e-value: 5e-72 |
Identity: 73.75% |
Span: 480bp (26.5%) |
Frame: -2 |
| hypothetical |
| Match: gi|125555650|gb|EAZ01256.1| |
score: 245 |
e-value: 1e-74 |
Identity: 73.75% |
Span: 480bp (26.5%) |
Frame: -2 |
| hypothetical |
| Match: gi|53793069|dbj|BAD54280.1| |
score: 242 |
e-value: 1e-63 |
Identity: 74.05% |
Span: 474bp (26.2%) |
Frame: -2 |
| putative |
| Match: gi|147818437|emb|CAN60729.1| |
score: 237 |
e-value: 2e-67 |
Identity: 79.58% |
Span: 426bp (23.5%) |
Frame: -2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|159464635|ref|XP_001690547.1| |
score: 231 |
e-value: 1e-58 |
Identity: 68.67% |
Span: 498bp (27.5%) |
Frame: -2 |
| RNA |
| Match: gi|116789825|gb|ABK25401.1| |
score: 202 |
e-value: 1e-49 |
Identity: 88.39% |
Span: 336bp (18.6%) |
Frame: -2 |
| unknown [Picea sitchensis] |
| Match: gi|125524864|gb|EAY72978.1| |
score: 199 |
e-value: 1e-61 |
Identity: 77.24% |
Span: 369bp (20.4%) |
Frame: -2 |
| hypothetical |
| Match: gi|125569477|gb|EAZ10992.1| |
score: 199 |
e-value: 7e-62 |
Identity: 77.24% |
Span: 369bp (20.4%) |
Frame: -2 |
| hypothetical |
| Match: gi|115478492|ref|NP_001062841.1| |
score: 141 |
e-value: 9e-36 |
Identity: 52.17% |
Span: 480bp (26.5%) |
Frame: -2 |
| Os09g0314500 |
| Match: gi|125563184|gb|EAZ08564.1| |
score: 141 |
e-value: 9e-36 |
Identity: 52.17% |
Span: 480bp (26.5%) |
Frame: -2 |
| hypothetical |
| Match: gi|145353373|ref|XP_001420989.1| |
score: 130 |
e-value: 4e-28 |
Identity: 45.73% |
Span: 489bp (27.0%) |
Frame: -2 |
| predicted |
| Match: gi|116061191|emb|CAL56579.1| |
score: 128 |
e-value: 2e-27 |
Identity: 45.12% |
Span: 489bp (27.0%) |
Frame: -2 |
| FOG: |
| Match: gi|157355205|emb|CAO48581.1| |
score: 108 |
e-value: 2e-21 |
Identity: 44.17% |
Span: 486bp (26.9%) |
Frame: -3 |
| unnamed |
| Match: gi|79319100|ref|NP_001031131.1| |
score: 106 |
e-value: 6e-21 |
Identity: 39.02% |
Span: 576bp (31.8%) |
Frame: -3 |
| CID11; |
| Match: gi|15223304|ref|NP_174556.1| |
score: 106 |
e-value: 6e-21 |
Identity: 39.02% |
Span: 576bp (31.8%) |
Frame: -3 |
| RNA-binding protein, putative [Arabidopsis thaliana] >gi6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thali... |
| Match: gi|147804944|emb|CAN62612.1| |
score: 98.6 |
e-value: 2e-18 |
Identity: 41.62% |
Span: 510bp (28.2%) |
Frame: -3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|1174153|gb|AAA86641.1| |
score: 97.4 |
e-value: 3e-18 |
Identity: 44.76% |
Span: 420bp (23.2%) |
Frame: -3 |
| RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15235177|ref|NP_192799.1| |
score: 96.7 |
e-value: 9e-101 |
Identity: 48.8% |
Span: 366bp (20.2%) |
Frame: -3 |
| CID12; RNA binding [Arabidopsis thaliana] >gi4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pf... |
| Match: gi|79325059|ref|NP_001031614.1| |
score: 96.7 |
e-value: 2e-97 |
Identity: 48.8% |
Span: 366bp (20.2%) |
Frame: -3 |
| RBP37 |
| Match: gi|15229132|ref|NP_190508.1| |
score: 94.7 |
e-value: 2e-17 |
Identity: 34.3% |
Span: 576bp (31.8%) |
Frame: -3 |
| gi|15229132|ref|NP_190508.1| RNA-binding protein, putative [Arabidopsis thaliana] gi|11358815|pir||T45844 RNA-binding... |
| Match: gi|110737686|dbj|BAF00782.1| |
score: 94.7 |
e-value: 2e-17 |
Identity: 34.3% |
Span: 576bp (31.8%) |
Frame: -3 |
| RNA-binding |
| Match: gi|50725622|dbj|BAD33089.1| |
score: 82.8 |
e-value: 9e-14 |
Identity: 45.31% |
Span: 348bp (19.2%) |
Frame: -3 |
| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] >gi182375457|dbj|BAG24017.1| RNA-binding protein [Or... |
| Match: gi|125601987|gb|EAZ41312.1| |
score: 82.4 |
e-value: 1e-13 |
Identity: 50% |
Span: 294bp (16.2%) |
Frame: -3 |
| hypothetical |
| Match: gi|115435208|ref|NP_001042362.1| |
score: 66.2 |
e-value: 7e-85 |
Identity: 38.32% |
Span: 312bp (17.2%) |
Frame: -3 |
| Os01g0209400 [Oryza sativa (japonica cultivar-group)] >gi56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sa... |
| Match: gi|125569477|gb|EAZ10992.1| |
score: 63.2 |
e-value: 7e-62 |
Identity: 36.67% |
Span: 312bp (17.2%) |
Frame: -3 |
| hypothetical |
| Match: gi|125524864|gb|EAY72978.1| |
score: 63.2 |
e-value: 1e-61 |
Identity: 36.67% |
Span: 312bp (17.2%) |
Frame: -3 |
| hypothetical |
| Match: gi|15231858|ref|NP_188063.1| |
score: 60.5 |
e-value: 4e-83 |
Identity: 39.64% |
Span: 291bp (16.1%) |
Frame: -3 |
| CID9 (CTC-Interacting Domain 9); RNA binding / protein binding [Arabidopsis thaliana] >gi11994215|dbj|BAB01337.1| unn... |
| Match: gi|125555650|gb|EAZ01256.1| |
score: 60.1 |
e-value: 1e-74 |
Identity: 33.58% |
Span: 327bp (18.1%) |
Frame: -3 |
| hypothetical |
| Match: gi|157357096|emb|CAO63584.1| |
score: 57.8 |
e-value: 1e-83 |
Identity: 35.14% |
Span: 327bp (18.1%) |
Frame: -3 |
| unnamed |
| Match: gi|15220902|ref|NP_175769.1| |
score: 54.7 |
e-value: 2e-82 |
Identity: 40.59% |
Span: 291bp (16.1%) |
Frame: -3 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] >gi12324022|gb|AAG51971.1|AC024... |
| Match: gi|51969708|dbj|BAD43546.1| |
score: 52 |
e-value: 1e-81 |
Identity: 37.37% |
Span: 291bp (16.1%) |
Frame: -3 |
| putative RNA-binding protein [Arabidopsis thaliana] >gi51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabido... |
| Match: gi|79319864|ref|NP_001031182.1| |
score: 52 |
e-value: 1e-81 |
Identity: 37.37% |
Span: 291bp (16.1%) |
Frame: -3 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|125597492|gb|EAZ37272.1| |
score: 51.6 |
e-value: 5e-72 |
Identity: 31.08% |
Span: 327bp (18.1%) |
Frame: -3 |
| hypothetical |
| Match: gi|8671859|gb|AAF78422.1|AC018748_1 |
score: 51.2 |
e-value: 8e-78 |
Identity: 41.49% |
Span: 270bp (14.9%) |
Frame: -3 |
| Contains similarity to RNA-binding protein from Arabidopsis thaliana gi2129727 and contains RNA recognition PF|00076 ... |
| Match: gi|147818437|emb|CAN60729.1| |
score: 43.9 |
e-value: 2e-67 |
Identity: 58.82% |
Span: 102bp (5.6%) |
Frame: -3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|115478492|ref|NP_001062841.1| |
score: 33.9 |
e-value: 9e-36 |
Identity: 31.03% |
Span: 261bp (14.4%) |
Frame: -3 |
| Os09g0314500 |
| Match: gi|125563184|gb|EAZ08564.1| |
score: 33.9 |
e-value: 9e-36 |
Identity: 31.03% |
Span: 261bp (14.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|62867578|emb|CAI84654.1| |
score: 30.4 |
e-value: 4e-71 |
Identity: 60.87% |
Span: 69bp (3.8%) |
Frame: -3 |
| hypothetical protein [Nicotiana tabacum] |
| Match: gi|53793069|dbj|BAD54280.1| |
score: 26.9 |
e-value: 1e-63 |
Identity: 52.17% |
Span: 69bp (3.8%) |
Frame: -3 |
| putative |
|
| arabidopsis/peptide [blastx] | Showing best 20 hits recorded |
| Match: At1G32790.1 |
score: 307 |
e-value: 2e-83 |
Identity: 90.36% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID11 | CID11; RNA binding / protein binding | chr1:11875154-11877168 REVERSE |
| Match: At1G32790.2 |
score: 296 |
e-value: 2e-80 |
Identity: 89.51% |
Span: 486bp (26.9%) |
Frame: -2 |
| Symbols: CID11 | CID11; RNA binding | chr1:11875008-11877168 REVERSE |
| Match: At4G10610.1 |
score: 296 |
e-value: 9e-103 |
Identity: 87.35% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559139 FORWARD |
| Match: At4G10610.2 |
score: 285 |
e-value: 2e-99 |
Identity: 86.88% |
Span: 480bp (26.5%) |
Frame: -2 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559015 FORWARD |
| Match: At3G49390.2 |
score: 280 |
e-value: 2e-75 |
Identity: 81.33% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID10 | CID10; RNA binding | chr3:18325886-18328643 REVERSE |
| Match: At3G49390.1 |
score: 280 |
e-value: 2e-75 |
Identity: 81.33% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID10 | CID10; RNA binding / protein binding | chr3:18325886-18328643 REVERSE |
| Match: At1G53650.1 |
score: 276 |
e-value: 2e-84 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID8 | CID8; RNA binding / protein binding | chr1:20032930-20034911 REVERSE |
| Match: At1G53650.2 |
score: 276 |
e-value: 1e-83 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID8 | CID8; RNA binding | chr1:20032930-20034911 REVERSE |
| Match: At3G14450.1 |
score: 273 |
e-value: 4e-85 |
Identity: 80.12% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID9 | CID9 (CTC-Interacting Domain 9); RNA binding / protein binding | chr3:4849795-4851608 FORWARD |
| Match: At5G24440.1 |
score: 251 |
e-value: 1e-66 |
Identity: 71.69% |
Span: 498bp (27.5%) |
Frame: -2 |
| Symbols: CID13 | CID13 (CTC-Interacting Domain 13); RNA binding | chr5:8345405-8347779 REVERSE |
| Match: At1G32790.2 |
score: 106 |
e-value: 4e-23 |
Identity: 39.02% |
Span: 576bp (31.8%) |
Frame: -3 |
| Symbols: CID11 | CID11; RNA binding | chr1:11875008-11877168 REVERSE |
| Match: At1G32790.1 |
score: 106 |
e-value: 4e-23 |
Identity: 39.02% |
Span: 576bp (31.8%) |
Frame: -3 |
| Symbols: CID11 | CID11; RNA binding / protein binding | chr1:11875154-11877168 REVERSE |
| Match: At4G10610.2 |
score: 96.7 |
e-value: 2e-99 |
Identity: 48.8% |
Span: 366bp (20.2%) |
Frame: -3 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559015 FORWARD |
| Match: At4G10610.1 |
score: 96.7 |
e-value: 9e-103 |
Identity: 48.8% |
Span: 366bp (20.2%) |
Frame: -3 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559139 FORWARD |
| Match: At3G49390.2 |
score: 94.7 |
e-value: 2e-19 |
Identity: 34.3% |
Span: 576bp (31.8%) |
Frame: -3 |
| Symbols: CID10 | CID10; RNA binding | chr3:18325886-18328643 REVERSE |
| Match: At3G49390.1 |
score: 94.7 |
e-value: 2e-19 |
Identity: 34.3% |
Span: 576bp (31.8%) |
Frame: -3 |
| Symbols: CID10 | CID10; RNA binding / protein binding | chr3:18325886-18328643 REVERSE |
| Match: At1G32790.2 |
score: 67 |
e-value: 4e-11 |
Identity: 41.98% |
Span: 243bp (13.4%) |
Frame: -2 |
| Symbols: CID11 | CID11; RNA binding | chr1:11875008-11877168 REVERSE |
| Match: At3G14450.1 |
score: 60.5 |
e-value: 4e-85 |
Identity: 39.64% |
Span: 291bp (16.1%) |
Frame: -3 |
| Symbols: CID9 | CID9 (CTC-Interacting Domain 9); RNA binding / protein binding | chr3:4849795-4851608 FORWARD |
| Match: At1G53650.1 |
score: 54.7 |
e-value: 2e-84 |
Identity: 40.59% |
Span: 291bp (16.1%) |
Frame: -3 |
| Symbols: CID8 | CID8; RNA binding / protein binding | chr1:20032930-20034911 REVERSE |
| Match: At1G53650.2 |
score: 52 |
e-value: 1e-83 |
Identity: 37.37% |
Span: 291bp (16.1%) |
Frame: -3 |
| Symbols: CID8 | CID8; RNA binding | chr1:20032930-20034911 REVERSE |
|
