| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At2G42120.2 |
score: 723 |
e-value: 0 |
Identity: 79.22% |
Span: 1311bp (73.0%) |
Frame: 1 |
| Symbols: POLD2 | DNA polymerase delta small subunit-related | chr2:17570360-17573043 REVERSE |
| Match: At2G42120.1 |
score: 718 |
e-value: 0 |
Identity: 79.04% |
Span: 1311bp (73.0%) |
Frame: 1 |
| Symbols: POLD2 | DNA polymerase delta small subunit-related | chr2:17570360-17573043 REVERSE |
|
| genbank/nr [blastx] | Showing best 83 hits recorded |
| Match: gi|42571181|ref|NP_973664.1| |
score: 723 |
e-value: 0 |
Identity: 79.22% |
Span: 1311bp (73.0%) |
Frame: 1 |
| POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT); DNA binding / DNA-directed DNA polymerase [Arabidopsis thaliana] >gi22531... |
| Match: gi|42569857|ref|NP_181742.2| |
score: 718 |
e-value: 0 |
Identity: 79.04% |
Span: 1311bp (73.0%) |
Frame: 1 |
| POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT); DNA binding / DNA-directed DNA polymerase [Arabidopsis thaliana] |
| Match: gi|2673906|gb|AAB88640.1| |
score: 708 |
e-value: 0 |
Identity: 76.43% |
Span: 1311bp (73.0%) |
Frame: 1 |
| gi|2673906|gb|AAB88640.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] >gi|7434811|pir||T00922 ... |
| Match: gi|108705983|gb|ABF93778.1| |
score: 651 |
e-value: 0 |
Identity: 70.93% |
Span: 1290bp (71.8%) |
Frame: 1 |
| DNA |
| Match: gi|50948889|ref|XP_493802.1| |
score: 624 |
e-value: 6e-177 |
Identity: 70.84% |
Span: 1239bp (69.0%) |
Frame: 1 |
| gi|50948889|ref|XP_493802.1| ESTs AU068594(C30493),D24468(R2008) correspond to a region of the predicted gene.~simila... |
| Match: gi|23306120|gb|AAN17387.1| |
score: 556 |
e-value: 2e-156 |
Identity: 65.92% |
Span: 1206bp (67.1%) |
Frame: 1 |
| Putataive DNA polymerase delta small subunit [Oryza sativa Japonica Group] |
| Match: gi|42744580|gb|AAH66617.1| |
score: 366 |
e-value: 2e-99 |
Identity: 44.06% |
Span: 1293bp (72.0%) |
Frame: 1 |
| Polymerase |
| Match: gi|28279582|gb|AAH45410.1| |
score: 362 |
e-value: 2e-98 |
Identity: 43.84% |
Span: 1293bp (72.0%) |
Frame: 1 |
| Pold2 protein [Danio rerio] >gi182891524|gb|AAI64684.1| Pold2 protein [Danio rerio] |
| Match: gi|74010360|ref|XP_539802.2| |
score: 345 |
e-value: 5e-93 |
Identity: 42.49% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|74010360|ref|XP_539802.2| PREDICTED: similar to DNA polymerase delta subunit 2 (DNA polymerase delta subunit p50) ... |
| Match: gi|13097135|gb|AAH03342.1| |
score: 343 |
e-value: 1e-92 |
Identity: 42.72% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|13097135|gb|AAH03342.1| Polymerase (DNA directed), delta 2, regulatory subunit [Mus musculus] |
| Match: gi|54262198|ref|NP_001005794.1| |
score: 342 |
e-value: 3e-92 |
Identity: 43.73% |
Span: 1203bp (67.0%) |
Frame: 1 |
| DNA-directed DNA polymerase delta 2 [Xenopus (Silurana) tropicalis] >gi49522345|gb|AAH75341.1| polymerase (DNA direct... |
| Match: gi|28703913|gb|AAH47262.1| |
score: 342 |
e-value: 3e-92 |
Identity: 43.73% |
Span: 1203bp (67.0%) |
Frame: 1 |
| gi|28703913|gb|AAH47262.1| Pold2-prov protein [Xenopus laevis] >gi|3718033|emb|CAA09373.1| XlCdc1 [Xenopus laevis] >g... |
| Match: gi|6679413|ref|NP_032920.1| |
score: 342 |
e-value: 3e-92 |
Identity: 42.49% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|6679413|ref|NP_032920.1| polymerase (DNA directed), delta 2, regulatory subunit; polymerase (DNA directed), delta ... |
| Match: gi|50926203|gb|AAH79267.1| |
score: 341 |
e-value: 6e-92 |
Identity: 42.72% |
Span: 1260bp (70.2%) |
Frame: 1 |
| Polymerase |
| Match: gi|72043034|ref|XP_782368.1| |
score: 340 |
e-value: 1e-91 |
Identity: 40.68% |
Span: 1305bp (72.7%) |
Frame: 1 |
| gi|72043034|ref|XP_782368.1| PREDICTED: similar to polymerase (DNA directed), delta 2, regulatory subunit [Strongyloc... |
| Match: gi|5453924|ref|NP_006221.1| |
score: 338 |
e-value: 7e-91 |
Identity: 42.25% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|5453924|ref|NP_006221.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa; polymerase (DNA directed), ... |
| Match: gi|88758648|gb|AAI13316.1| |
score: 338 |
e-value: 4e-91 |
Identity: 43.49% |
Span: 1203bp (67.0%) |
Frame: 1 |
| Polymerase |
| Match: gi|109066704|ref|XP_001094281.1| |
score: 337 |
e-value: 1e-90 |
Identity: 42.25% |
Span: 1260bp (70.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|27806075|ref|NP_776853.1| |
score: 332 |
e-value: 4e-89 |
Identity: 41.51% |
Span: 1254bp (69.8%) |
Frame: 1 |
| gi|27806075|ref|NP_776853.1| polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Bos taurus] gi|1352306|sp|... |
| Match: gi|109066706|ref|XP_001093360.1| |
score: 309 |
e-value: 2e-82 |
Identity: 40.38% |
Span: 1260bp (70.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|47212927|emb|CAF90299.1| |
score: 308 |
e-value: 4e-82 |
Identity: 38.94% |
Span: 1335bp (74.3%) |
Frame: 1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|108870916|gb|EAT35141.1| |
score: 293 |
e-value: 2e-77 |
Identity: 39.9% |
Span: 1200bp (66.8%) |
Frame: 1 |
| DNA |
| Match: gi|108876529|gb|EAT40754.1| |
score: 293 |
e-value: 1e-77 |
Identity: 39.9% |
Span: 1200bp (66.8%) |
Frame: 1 |
| DNA |
| Match: gi|55235213|gb|EAA14861.2| |
score: 291 |
e-value: 5e-77 |
Identity: 39.52% |
Span: 1200bp (66.8%) |
Frame: 1 |
| gi|55235213|gb|EAA14861.2| ENSANGP00000013916 [Anopheles gambiae str. PEST] >gi|58392837|ref|XP_319657.2| ENSANGP0000... |
| Match: gi|66812748|ref|XP_640553.1| |
score: 290 |
e-value: 1e-76 |
Identity: 39.9% |
Span: 1203bp (67.0%) |
Frame: 1 |
| gi|66812748|ref|XP_640553.1| hypothetical protein DDB0204579 [Dictyostelium discoideum] >gi|60468579|gb|EAL66582.1| h... |
| Match: gi|108876528|gb|EAT40753.1| |
score: 288 |
e-value: 6e-76 |
Identity: 39.61% |
Span: 1200bp (66.8%) |
Frame: 1 |
| DNA |
| Match: gi|21064173|gb|AAM29316.1| |
score: 269 |
e-value: 4e-70 |
Identity: 36.07% |
Span: 1278bp (71.2%) |
Frame: 1 |
| gi|21064173|gb|AAM29316.1| AT27586p [Drosophila melanogaster] |
| Match: gi|21358653|ref|NP_647659.1| |
score: 268 |
e-value: 5e-70 |
Identity: 36.07% |
Span: 1278bp (71.2%) |
Frame: 1 |
| gi|21358653|ref|NP_647659.1| CG12018-PA [Drosophila melanogaster] gi|13431497|sp|Q9W088|DPD2_DROME DNA polymerase del... |
| Match: gi|54641158|gb|EAL29908.1| |
score: 264 |
e-value: 1e-68 |
Identity: 34.71% |
Span: 1275bp (71.0%) |
Frame: 1 |
| gi|54641158|gb|EAL29908.1| GA11341-PA [Drosophila pseudoobscura] |
| Match: gi|28317170|gb|AAD46843.2| |
score: 259 |
e-value: 4e-67 |
Identity: 37.82% |
Span: 1134bp (63.1%) |
Frame: 1 |
| gi|28317170|gb|AAD46843.2| HL03874p [Drosophila melanogaster] |
| Match: gi|39968733|ref|XP_365757.1| |
score: 255 |
e-value: 6e-66 |
Identity: 35.7% |
Span: 1254bp (69.8%) |
Frame: 1 |
| gi|39968733|ref|XP_365757.1| hypothetical protein MG02459.4 [Magnaporthe grisea 70-15] |
| Match: gi|55630042|ref|XP_528027.1| |
score: 254 |
e-value: 1e-65 |
Identity: 35.97% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|55630042|ref|XP_528027.1| PREDICTED: polymerase (DNA directed), delta 2, regulatory subunit [Pan troglodytes] |
| Match: gi|46125573|ref|XP_387340.1| |
score: 253 |
e-value: 3e-65 |
Identity: 32.93% |
Span: 1329bp (74.0%) |
Frame: 1 |
| hypothetical protein FG07164.1 [Gibberella zeae PH-1] |
| Match: gi|111068041|gb|EAT89161.1| |
score: 246 |
e-value: 3e-63 |
Identity: 34.85% |
Span: 1182bp (65.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|88178502|gb|EAQ85970.1| |
score: 245 |
e-value: 6e-63 |
Identity: 34.05% |
Span: 1254bp (69.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|58263352|ref|XP_569086.1| |
score: 244 |
e-value: 1e-62 |
Identity: 35.27% |
Span: 1197bp (66.6%) |
Frame: 1 |
| DNA |
| Match: gi|71021785|ref|XP_761123.1| |
score: 244 |
e-value: 1e-62 |
Identity: 36.79% |
Span: 1107bp (61.6%) |
Frame: 1 |
| gi|71021785|ref|XP_761123.1| hypothetical protein UM04976.1 [Ustilago maydis 521] >gi|46100573|gb|EAK85806.1| hypothe... |
| Match: gi|50549919|ref|XP_502431.1| |
score: 238 |
e-value: 5e-61 |
Identity: 34.79% |
Span: 1239bp (69.0%) |
Frame: 1 |
| gi|50549919|ref|XP_502431.1| hypothetical protein [Yarrowia lipolytica] >gi|49648299|emb|CAG80619.1| unnamed protein ... |
| Match: gi|16944625|emb|CAC28660.2| |
score: 230 |
e-value: 1e-58 |
Identity: 32.01% |
Span: 1281bp (71.3%) |
Frame: 1 |
| gi|16944625|emb|CAC28660.2| related to DNA POLYMERASE DELTA SMALL SUBUNIT [Neurospora crassa] >gi|32404904|ref|XP_323... |
| Match: gi|68467741|ref|XP_722029.1| |
score: 227 |
e-value: 1e-57 |
Identity: 35.81% |
Span: 1098bp (61.1%) |
Frame: 1 |
| gi|68467741|ref|XP_722029.1| hypothetical protein CaO19.11442 [Candida albicans SC5314] >gi|68468060|ref|XP_721869.1|... |
| Match: gi|70994498|ref|XP_752028.1| |
score: 224 |
e-value: 8e-57 |
Identity: 32.71% |
Span: 1206bp (67.1%) |
Frame: 1 |
| DNA |
| Match: gi|44980038|gb|AAS50234.1| |
score: 222 |
e-value: 5e-56 |
Identity: 33.87% |
Span: 1194bp (66.5%) |
Frame: 1 |
| gi|44980038|gb|AAS50234.1| AAL132Cp [Ashbya gossypii ATCC 10895] >gi|45184692|ref|NP_982410.1| AAL132Cp [Eremothecium... |
| Match: gi|110764548|ref|XP_001122961.1| |
score: 221 |
e-value: 9e-56 |
Identity: 36.67% |
Span: 1137bp (63.3%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|90299190|gb|EAS28821.1| |
score: 221 |
e-value: 9e-56 |
Identity: 31.38% |
Span: 1278bp (71.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|49658097|emb|CAG90937.1| |
score: 218 |
e-value: 6e-55 |
Identity: 34.51% |
Span: 1101bp (61.3%) |
Frame: 1 |
| gi|49658097|emb|CAG90937.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50427629|ref|XP_462427.1| unna... |
| Match: gi|68066984|ref|XP_675463.1| |
score: 217 |
e-value: 1e-54 |
Identity: 31.45% |
Span: 1281bp (71.3%) |
Frame: 1 |
| gi|68066984|ref|XP_675463.1| DNA polymerase delta small subunit, putative [Plasmodium berghei] >gi|56494663|emb|CAH94... |
| Match: gi|49524436|emb|CAG58033.1| |
score: 217 |
e-value: 1e-54 |
Identity: 33.09% |
Span: 1107bp (61.6%) |
Frame: 1 |
| unnamed |
| Match: gi|50311455|ref|XP_455752.1| |
score: 216 |
e-value: 2e-54 |
Identity: 33.03% |
Span: 1194bp (66.5%) |
Frame: 1 |
| gi|50311455|ref|XP_455752.1| unnamed protein product [Kluyveromyces lactis] >gi|49644888|emb|CAG98460.1| unnamed prot... |
| Match: gi|3649756|emb|CAB11105.1| |
score: 213 |
e-value: 3e-53 |
Identity: 32.15% |
Span: 1092bp (60.8%) |
Frame: 1 |
| DNA |
| Match: gi|2052246|emb|CAA73149.1| |
score: 210 |
e-value: 2e-52 |
Identity: 31.85% |
Span: 1200bp (66.8%) |
Frame: 1 |
| Cdc1 |
| Match: gi|83282443|ref|XP_729773.1| |
score: 210 |
e-value: 2e-52 |
Identity: 30.19% |
Span: 1281bp (71.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|89286420|gb|EAR84419.1| |
score: 202 |
e-value: 3e-50 |
Identity: 30.02% |
Span: 1260bp (70.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|6322465|ref|NP_012539.1| |
score: 201 |
e-value: 9e-50 |
Identity: 30.44% |
Span: 1341bp (74.7%) |
Frame: 1 |
| gi|6322465|ref|NP_012539.1| Putative role in DNA replication; Hys2p [Saccharomyces cerevisiae] gi|1170421|sp|P46957|D... |
| Match: gi|66359782|ref|XP_627069.1| |
score: 200 |
e-value: 2e-49 |
Identity: 31.53% |
Span: 1212bp (67.5%) |
Frame: 1 |
| gi|66359782|ref|XP_627069.1| DNA polymerase delta2, inactive calcineurin like phosphatase subunit [Cryptosporidium pa... |
| Match: gi|1256943|dbj|BAA08859.1| |
score: 200 |
e-value: 2e-49 |
Identity: 30.44% |
Span: 1341bp (74.7%) |
Frame: 1 |
| gi|1256943|dbj|BAA08859.1| HYS2 [Saccharomyces cerevisiae] |
| Match: gi|67608601|ref|XP_666890.1| |
score: 198 |
e-value: 6e-49 |
Identity: 31.46% |
Span: 1212bp (67.5%) |
Frame: 1 |
| gi|67608601|ref|XP_666890.1| hypothetical protein Chro.80190 [Cryptosporidium hominis] >gi|54657959|gb|EAL36659.1| hy... |
| Match: gi|67526799|ref|XP_661461.1| |
score: 196 |
e-value: 2e-48 |
Identity: 34.85% |
Span: 900bp (50.1%) |
Frame: 1 |
| hypothetical protein AN3857.2 [Aspergillus nidulans FGSC A4] >gi40739932|gb|EAA59122.1| hypothetical protein AN3857.2... |
| Match: gi|65302410|emb|CAI74517.1| |
score: 173 |
e-value: 3e-41 |
Identity: 29.84% |
Span: 1242bp (69.2%) |
Frame: 1 |
| gi|65302410|emb|CAI74517.1| DNA polymerase delta small subunit, putative [Theileria annulata] |
| Match: gi|110758304|ref|XP_001120552.1| |
score: 155 |
e-value: 6e-36 |
Identity: 43.56% |
Span: 483bp (26.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|71030786|ref|XP_765035.1| |
score: 148 |
e-value: 7e-34 |
Identity: 27.94% |
Span: 1230bp (68.5%) |
Frame: 1 |
| DNA |
| Match: gi|71424337|ref|XP_812760.1| |
score: 140 |
e-value: 3e-31 |
Identity: 25.71% |
Span: 1194bp (66.5%) |
Frame: 1 |
| gi|71424337|ref|XP_812760.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi] >gi|70877580|gb|EAN90909.1|... |
| Match: gi|71650862|ref|XP_814120.1| |
score: 140 |
e-value: 2e-31 |
Identity: 26.09% |
Span: 1194bp (66.5%) |
Frame: 1 |
| gi|71650862|ref|XP_814120.1| DNA polymerase delta subunit 2, putative [Trypanosoma cruzi] >gi|70879066|gb|EAN92269.1|... |
| Match: gi|71750366|ref|XP_824094.1| |
score: 138 |
e-value: 8e-31 |
Identity: 26.32% |
Span: 1215bp (67.7%) |
Frame: 1 |
| DNA |
| Match: gi|3875793|emb|CAA97785.1| |
score: 135 |
e-value: 8e-30 |
Identity: 24.72% |
Span: 1260bp (70.2%) |
Frame: 1 |
| Hypothetical |
| Match: gi|68126963|emb|CAJ05268.1| |
score: 135 |
e-value: 5e-30 |
Identity: 25.09% |
Span: 1176bp (65.5%) |
Frame: 1 |
| DNA |
| Match: gi|39593807|emb|CAE62100.1| |
score: 127 |
e-value: 1e-27 |
Identity: 23.71% |
Span: 1260bp (70.2%) |
Frame: 1 |
| gi|39593807|emb|CAE62100.1| Hypothetical protein CBG06130 [Caenorhabditis briggsae] |
| Match: gi|85014271|ref|XP_955631.1| |
score: 108 |
e-value: 1e-21 |
Identity: 24.14% |
Span: 1167bp (65.0%) |
Frame: 1 |
| DNA |
| Match: gi|110758333|ref|XP_001121190.1| |
score: 105 |
e-value: 7e-21 |
Identity: 31.88% |
Span: 678bp (37.8%) |
Frame: 1 |
| PREDICTED: similar to polymerase (DNA directed), delta 2, regulatory subunit, partial [Apis mellifera] |
| Match: gi|13431445|sp|O27456|DP2S_METTH |
score: 71.6 |
e-value: 1e-10 |
Identity: 25.14% |
Span: 1044bp (58.1%) |
Frame: 1 |
| DNA |
| Match: gi|57641837|ref|YP_184315.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 23.93% |
Span: 804bp (44.8%) |
Frame: 1 |
| DNA |
| Match: gi|5457554|emb|CAB49045.1| |
score: 67.4 |
e-value: 2e-09 |
Identity: 24.43% |
Span: 768bp (42.8%) |
Frame: 1 |
| dp1/polB |
| Match: gi|14590067|ref|NP_142131.1| |
score: 63.9 |
e-value: 2e-08 |
Identity: 24.15% |
Span: 837bp (46.6%) |
Frame: 1 |
| gi|14590067|ref|NP_142131.1| hypothetical protein PH0123 [Pyrococcus horikoshii] gi|13431452|sp|O57863|DP2S_PYRHO DNA... |
| Match: gi|19913782|gb|AAM03491.1| |
score: 63.9 |
e-value: 2e-08 |
Identity: 26.05% |
Span: 762bp (42.4%) |
Frame: 1 |
| DNA-directed |
| Match: gi|21227447|ref|NP_633369.1| |
score: 63.9 |
e-value: 2e-08 |
Identity: 25.95% |
Span: 762bp (42.4%) |
Frame: 1 |
| gi|21227447|ref|NP_633369.1| DNA polymerase II small subunit [Methanosarcina mazei Goe1] gi|20905816|gb|AAM31041.1| D... |
| Match: gi|72395700|gb|AAZ69973.1| |
score: 62 |
e-value: 9e-08 |
Identity: 25.86% |
Span: 762bp (42.4%) |
Frame: 1 |
| DNA-directed |
| Match: gi|84490361|ref|YP_448593.1| |
score: 61.2 |
e-value: 2e-07 |
Identity: 27.22% |
Span: 528bp (29.4%) |
Frame: 1 |
| PolB |
| Match: gi|13431447|sp|O28484|DP2S_ARCFU |
score: 61.2 |
e-value: 2e-07 |
Identity: 25% |
Span: 660bp (36.7%) |
Frame: 1 |
| DNA |
| Match: gi|18891915|gb|AAL80142.1| |
score: 59.7 |
e-value: 4e-07 |
Identity: 23.21% |
Span: 837bp (46.6%) |
Frame: 1 |
| DNA |
| Match: gi|45047131|emb|CAF29564.1| |
score: 59.3 |
e-value: 6e-07 |
Identity: 25.53% |
Span: 804bp (44.8%) |
Frame: 1 |
| DNA |
| Match: gi|70914220|ref|XP_731769.1| |
score: 57.8 |
e-value: 2e-06 |
Identity: 35.35% |
Span: 294bp (16.4%) |
Frame: 1 |
| DNA |
| Match: gi|71483066|gb|AAZ32499.1| |
score: 55.1 |
e-value: 1e-05 |
Identity: 25.09% |
Span: 804bp (44.8%) |
Frame: 1 |
| DNA |
| Match: gi|71076883|ref|XP_770958.1| |
score: 54.7 |
e-value: 1e-05 |
Identity: 22.53% |
Span: 1029bp (57.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|71483036|gb|AAZ32470.1| |
score: 53.1 |
e-value: 4e-05 |
Identity: 25.09% |
Span: 804bp (44.8%) |
Frame: 1 |
| DNA |
|
| 1 lower scoring hits censored -- only 83 best hits are stored. |
