| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270251335|emb|CBI34709.1| |
score: 572 |
e-value: 5e-161 |
Identity: 71.56% |
Span: 1293bp (72.3%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225426862|ref|XP_002276931.1| |
score: 572 |
e-value: 5e-161 |
Identity: 71.56% |
Span: 1293bp (72.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255537401|ref|XP_002509767.1| |
score: 549 |
e-value: 4e-154 |
Identity: 63.6% |
Span: 1467bp (82.0%) |
Frame: 2 |
| conserved hypothetical protein [Ricinus communis] >gi223549666|gb|EEF51154.1| conserved hypothetical protein [Ricinus... |
| Match: gi|147798860|emb|CAN68047.1| |
score: 536 |
e-value: 2e-150 |
Identity: 71.01% |
Span: 1227bp (68.6%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15222076|ref|NP_172740.1| |
score: 527 |
e-value: 2e-147 |
Identity: 61.63% |
Span: 1467bp (82.0%) |
Frame: 2 |
| S1 RNA-binding domain-containing protein [Arabidopsis thaliana] >gi15028377|gb|AAK76665.1| putative heat shock factor... |
| Match: gi|222424916|dbj|BAH20409.1| |
score: 525 |
e-value: 1e-146 |
Identity: 61.43% |
Span: 1467bp (82.0%) |
Frame: 2 |
| AT1G12800 [Arabidopsis thaliana] |
| Match: gi|8698727|gb|AAF78485.1|AC012187_5 |
score: 520 |
e-value: 3e-145 |
Identity: 60.64% |
Span: 1467bp (82.0%) |
Frame: 2 |
| Contains similarity to S1 protein from Homo sapiens gbU27517 and contains a S1 RNA binding PF|00575 domain. EST gb|F... |
| Match: gi|118486930|gb|ABK95298.1| |
score: 513 |
e-value: 4e-143 |
Identity: 67.8% |
Span: 1230bp (68.8%) |
Frame: 2 |
| unknown [Populus trichocarpa] |
| Match: gi|224074901|ref|XP_002304482.1| |
score: 483 |
e-value: 3e-134 |
Identity: 63% |
Span: 1281bp (71.6%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222841914|gb|EEE79461.1| predicted protein [Populus trichocarpa] |
| Match: gi|242060184|ref|XP_002451381.1| |
score: 406 |
e-value: 4e-111 |
Identity: 48.99% |
Span: 1458bp (81.5%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_04g001123 [Sorghum bicolor] >gi241931212|gb|EES04357.1| hypothetical protein SORBIDRA... |
| Match: gi|115443785|ref|NP_001045672.1| |
score: 393 |
e-value: 4e-107 |
Identity: 52.8% |
Span: 1230bp (68.8%) |
Frame: 2 |
| Os02g0115600 [Oryza sativa (japonica cultivar-group)] >gi41052593|dbj|BAD07935.1| heat shock factor protein hsf8-like... |
| Match: gi|168036805|ref|XP_001770896.1| |
score: 188 |
e-value: 2e-45 |
Identity: 34.43% |
Span: 1068bp (59.7%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162677760|gb|EDQ64226.1| predicted protein [Physcomitrella... |
| Match: gi|62318733|dbj|BAD93753.1| |
score: 158 |
e-value: 2e-36 |
Identity: 81.25% |
Span: 288bp (16.1%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|168056001|ref|XP_001780011.1| |
score: 111 |
e-value: 3e-22 |
Identity: 25.41% |
Span: 1059bp (59.2%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162668616|gb|EDQ55220.1| predicted protein [Physcomitrella... |
| Match: gi|116789895|gb|ABK25430.1| |
score: 103 |
e-value: 5e-20 |
Identity: 30.37% |
Span: 762bp (42.6%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|225433644|ref|XP_002264430.1| |
score: 102 |
e-value: 1e-19 |
Identity: 31.95% |
Span: 684bp (38.2%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270256603|emb|CBI39420.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224035425|gb|ACN36788.1| |
score: 97.4 |
e-value: 5e-18 |
Identity: 27.31% |
Span: 684bp (38.2%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|194689506|gb|ACF78837.1| |
score: 97.4 |
e-value: 5e-18 |
Identity: 27.31% |
Span: 684bp (38.2%) |
Frame: 2 |
| unknown [Zea mays] >gi194706906|gb|ACF87537.1| unknown [Zea mays] >gi|219887451|gb|ACL54100.1| unknown [Zea mays] |
| Match: gi|226509759|ref|NP_001151317.1| |
score: 96.3 |
e-value: 1e-17 |
Identity: 27.62% |
Span: 684bp (38.2%) |
Frame: 2 |
| RNA binding S1 [Zea mays] >gi195645792|gb|ACG42364.1| RNA binding S1 [Zea mays] |
| Match: gi|41469635|gb|AAS07358.1| |
score: 96.3 |
e-value: 1e-17 |
Identity: 28.81% |
Span: 684bp (38.2%) |
Frame: 2 |
| putative ribosomal S1 protein (with alternative splicing) [Oryza sativa Japonica Group] >gi108712065|gb|ABF99860.1| S... |
| Match: gi|145344629|ref|XP_001416831.1| |
score: 95.1 |
e-value: 2e-17 |
Identity: 30.98% |
Span: 711bp (39.7%) |
Frame: 2 |
| Putative mitochondrial ribosomal protein S1 [Ostreococcus lucimarinus CCE9901] >gi144577057|gb|ABO95124.1| Putative m... |
| Match: gi|168030832|ref|XP_001767926.1| |
score: 94.7 |
e-value: 3e-17 |
Identity: 27.94% |
Span: 714bp (39.9%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162680768|gb|EDQ67201.1| predicted protein [Physcomitrella... |
| Match: gi|242032271|ref|XP_002463530.1| |
score: 92.8 |
e-value: 1e-16 |
Identity: 27.73% |
Span: 684bp (38.2%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_01g001480 [Sorghum bicolor] >gi241917384|gb|EER90528.1| hypothetical protein SORBIDRA... |
| Match: gi|147802809|emb|CAN68483.1| |
score: 92.8 |
e-value: 1e-16 |
Identity: 27.99% |
Span: 684bp (38.2%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|18403854|ref|NP_566737.1| |
score: 89.4 |
e-value: 1e-15 |
Identity: 28.51% |
Span: 690bp (38.6%) |
Frame: 2 |
| S1 RNA-binding domain-containing protein [Arabidopsis thaliana] >gi9293944|dbj|BAB01847.1| unnamed protein product [A... |
|
| 82 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G12800.1 |
score: 527 |
e-value: 1e-149 |
Identity: 61.63% |
Span: 1467bp (82.0%) |
Frame: 2 |
| S1 RNA-binding domain-containing protein | chr1:4361776-4365187 REVERSE |
| Match: At3G23700.1 |
score: 89.4 |
e-value: 7e-18 |
Identity: 28.51% |
Span: 690bp (38.6%) |
Frame: 2 |
| S1 RNA-binding domain-containing protein | chr3:8531696-8533749 REVERSE |
|
| swissprot [blastx] | Showing best 9 hits recorded |
| Match: Q9JZ44 |
score: 74.7 |
e-value: 2e-12 |
Identity: 31.82% |
Span: 396bp (22.1%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B GN=rpsA PE=1 SV=1 |
| Match: Q4L6I1 |
score: 74.3 |
e-value: 3e-12 |
Identity: 36.17% |
Span: 423bp (23.6%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1 |
| Match: Q6GGT5 |
score: 73.2 |
e-value: 6e-12 |
Identity: 31.4% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain MRSA252) GN=rpsA PE=3 SV=1 |
| Match: O06000 |
score: 73.2 |
e-value: 6e-12 |
Identity: 31.4% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 homolog OS=Bacillus cereus (strain ATCC 10987) GN=BCE_1625 PE=3 SV=1 |
| Match: Q8NWM8 |
score: 71.2 |
e-value: 2e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain MW2) GN=rpsA PE=3 SV=1 |
| Match: Q6G987 |
score: 71.2 |
e-value: 2e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain MSSA476) GN=rpsA PE=3 SV=1 |
| Match: Q7A5J0 |
score: 71.2 |
e-value: 2e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain N315) GN=rpsA PE=1 SV=1 |
| Match: Q99U14 |
score: 71.2 |
e-value: 2e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpsA PE=1 SV=1 |
| Match: Q5HFU7 |
score: 71.2 |
e-value: 2e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 2 |
| 30S ribosomal protein S1 OS=Staphylococcus aureus (strain COL) GN=rpsA PE=3 SV=1 |
|
