| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15222076|ref|NP_172740.1| |
score: 527.7 |
e-value: 2e-148 |
Identity: 61.63% |
Span: 1467bp (82.0%) |
Frame: 1 |
| S1 RNA-binding domain-containing protein [Arabidopsis thaliana] >gi15028377|gb|AAK76665.1| putative heat shock factor... |
| Match: gi|25518466|pir||D86261 |
score: 520.4 |
e-value: 3e-146 |
Identity: 60.64% |
Span: 1467bp (82.0%) |
Frame: 1 |
| gi|25518466|pir||D86261 hypothetical protein F13K23.5 - Arabidopsis thaliana gi|8698727|gb|AAF78485.1| Contains simil... |
| Match: gi|18403854|ref|NP_566737.1| |
score: 89.35 |
e-value: 2e-16 |
Identity: 28.51% |
Span: 690bp (38.6%) |
Frame: 1 |
| S1 RNA-binding domain-containing protein [Arabidopsis thaliana] >gi9293944|dbj|BAB01847.1| unnamed protein product [A... |
| Match: gi|15614199|ref|NP_242502.1| |
score: 79.34 |
e-value: 2.1e-13 |
Identity: 27.23% |
Span: 705bp (39.4%) |
Frame: 1 |
| gi|15614199|ref|NP_242502.1| 30S ribosomal protein S1 [Bacillus halodurans] gi|25311771|pir||D83854 hypothetical prot... |
| Match: gi|28493260|ref|NP_787421.1| |
score: 76.64 |
e-value: 1.3e-12 |
Identity: 26.52% |
Span: 543bp (30.4%) |
Frame: 1 |
| gi|28493260|ref|NP_787421.1| 30S ribosomal protein S1 [Tropheryma whipplei str. Twist] gi|28476301|gb|AAO44390.1| 30S... |
| Match: gi|28572628|ref|NP_789408.1| |
score: 76.64 |
e-value: 1.3e-12 |
Identity: 26.52% |
Span: 543bp (30.4%) |
Frame: 1 |
| gi|28572628|ref|NP_789408.1| 30s ribosomal protein S1 [Tropheryma whipplei TW08/27] gi|28410760|emb|CAD67146.1| 30s r... |
| Match: gi|15677167|ref|NP_274320.1| |
score: 75.87 |
e-value: 2.3e-12 |
Identity: 31.82% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|15677167|ref|NP_274320.1| 30S ribosomal protein S1 [Neisseria meningitidis MC58] gi|11275276|pir||G81099 30S ribos... |
| Match: gi|15794409|ref|NP_284231.1| |
score: 75.87 |
e-value: 2.3e-12 |
Identity: 31.82% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|15794409|ref|NP_284231.1| 30S ribosomal protein S1 [Neisseria meningitidis Z2491] gi|11275274|pir||G81842 30S ribo... |
| Match: gi|21399415|ref|NP_655400.1| |
score: 73.94 |
e-value: 8.6e-12 |
Identity: 31.4% |
Span: 516bp (28.8%) |
Frame: 1 |
| gi|21399415|ref|NP_655400.1| S1, S1 RNA binding domain [Bacillus anthracis A2012] gi|30261593|ref|NP_843970.1| riboso... |
| Match: gi|3122814|sp|O06000|RS1H_BACCE |
score: 73.94 |
e-value: 8.6e-12 |
Identity: 31.4% |
Span: 516bp (28.8%) |
Frame: 1 |
| gi|3122814|sp|O06000|RS1H_BACCE 30S RIBOSOMAL PROTEIN S1 HOMOLOG gi|2094771|emb|CAA70584.1| 30S ribosomal protein S1 ... |
| Match: gi|30019646|ref|NP_831277.1| |
score: 73.56 |
e-value: 1.1e-11 |
Identity: 31.4% |
Span: 516bp (28.8%) |
Frame: 1 |
| gi|30019646|ref|NP_831277.1| SSU ribosomal protein S1P [Bacillus cereus ATCC 14579] gi|29895190|gb|AAP08478.1| SSU ri... |
| Match: gi|23112215|ref|ZP_00097728.1| |
score: 73.56 |
e-value: 1.1e-11 |
Identity: 34.11% |
Span: 387bp (21.6%) |
Frame: 1 |
| gi|23112215|ref|ZP_00097728.1| COG0539: Ribosomal protein S1 [Desulfitobacterium hafniense] |
| Match: gi|28378535|ref|NP_785427.1| |
score: 72.79 |
e-value: 1.9e-11 |
Identity: 29.23% |
Span: 390bp (21.8%) |
Frame: 1 |
| gi|28378535|ref|NP_785427.1| ribosomal protein S1 [Lactobacillus plantarum WCFS1] gi|28271371|emb|CAD64276.1| ribosom... |
| Match: gi|24379626|ref|NP_721581.1| |
score: 72.79 |
e-value: 1.9e-11 |
Identity: 25.14% |
Span: 537bp (30.0%) |
Frame: 1 |
| gi|24379626|ref|NP_721581.1| putative ribosomal protein S1; sequence specific DNA-binding protein [Streptococcus muta... |
| Match: gi|22537308|ref|NP_688159.1| |
score: 72.4 |
e-value: 2.5e-11 |
Identity: 26.26% |
Span: 537bp (30.0%) |
Frame: 1 |
| gi|22537308|ref|NP_688159.1| ribosomal protein S1 [Streptococcus agalactiae 2603V/R] gi|25011274|ref|NP_735669.1| Unk... |
| Match: gi|21702576|gb|AAM75973.1| |
score: 72.4 |
e-value: 2.5e-11 |
Identity: 30.3% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|21702576|gb|AAM75973.1| ribosomal protein S1 [Candidatus Tremblaya princeps] |
| Match: gi|21283094|ref|NP_646182.1| |
score: 72.02 |
e-value: 3.3e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 1 |
| gi|21283094|ref|NP_646182.1| 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus MW2] gi|21204534|dbj|BAB95... |
| Match: gi|15924466|ref|NP_372000.1| |
score: 72.02 |
e-value: 3.3e-11 |
Identity: 30.81% |
Span: 516bp (28.8%) |
Frame: 1 |
| gi|15924466|ref|NP_372000.1| 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus Mu50] gi|15927057|ref|NP_3... |
| Match: gi|15900746|ref|NP_345350.1| |
score: 71.25 |
e-value: 5.6e-11 |
Identity: 26.79% |
Span: 672bp (37.6%) |
Frame: 1 |
| gi|15900746|ref|NP_345350.1| ribosomal protein S1 [Streptococcus pneumoniae TIGR4] gi|25311765|pir||E95099 ribosomal ... |
| Match: gi|1098565|gb|AAA97575.1| |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 26.61% |
Span: 699bp (39.1%) |
Frame: 1 |
| gi|1098565|gb|AAA97575.1| ribosomal S1 protein |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 27.04% |
Span: 699bp (39.1%) |
Frame: 1 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|1004353|gb|AAA77669.1| |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 26.61% |
Span: 699bp (39.1%) |
Frame: 1 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|1085376|pir||JC4026 |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 26.61% |
Span: 699bp (39.1%) |
Frame: 1 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|15902808|ref|NP_358358.1| |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 26.34% |
Span: 672bp (37.6%) |
Frame: 1 |
| gi|15902808|ref|NP_358358.1| 30S Ribosomal protein S1 [Streptococcus pneumoniae R6] gi|25311763|pir||D97967 30S ribos... |
| Match: gi|23025134|ref|ZP_00064306.1| |
score: 70.86 |
e-value: 7.3e-11 |
Identity: 27.04% |
Span: 699bp (39.1%) |
Frame: 1 |
| gi|23025134|ref|ZP_00064306.1| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|15674934|ref|NP_269108.1| |
score: 70.09 |
e-value: 1.2e-10 |
Identity: 26.82% |
Span: 537bp (30.0%) |
Frame: 1 |
| gi|15674934|ref|NP_269108.1| putative ribosomal protein S1-like DNA-binding protein [Streptococcus pyogenes] gi|19745... |
| Match: gi|30141902|emb|CAD30282.1| |
score: 70.09 |
e-value: 1.2e-10 |
Identity: 30.88% |
Span: 408bp (22.8%) |
Frame: 1 |
| gi|30141902|emb|CAD30282.1| 30S ribosomal protein S1 [Thermus thermophilus] |
| Match: gi|29349753|ref|NP_813256.1| |
score: 69.71 |
e-value: 1.6e-10 |
Identity: 29.53% |
Span: 447bp (25.0%) |
Frame: 1 |
| gi|29349753|ref|NP_813256.1| 30S ribosomal protein S1 [Bacteroides thetaiotaomicron VPI-5482] gi|29341663|gb|AAO79450... |
| Match: gi|30249909|ref|NP_841979.1| |
score: 69.32 |
e-value: 2.1e-10 |
Identity: 30.3% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|30249909|ref|NP_841979.1| Ribosomal protein S1:S1 RNA binding domain [Nitrosomonas europaea ATCC 19718] gi|3018094... |
| Match: gi|33597660|ref|NP_885303.1| |
score: 68.94 |
e-value: 2.8e-10 |
Identity: 28.79% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|33597660|ref|NP_885303.1| 30S ribosomal protein S1 [Bordetella parapertussis] gi|33602440|ref|NP_890000.1| 30S rib... |
| Match: gi|33592107|ref|NP_879751.1| |
score: 68.94 |
e-value: 2.8e-10 |
Identity: 28.79% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|33592107|ref|NP_879751.1| 30S ribosomal protein S1 [Bordetella pertussis] gi|33571751|emb|CAE41252.1| 30S ribosoma... |
| Match: gi|23465561|ref|NP_696164.1| |
score: 68.55 |
e-value: 3.6e-10 |
Identity: 28.79% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|23465561|ref|NP_696164.1| 30S ribosomal protein S1 [Bifidobacterium longum NCC2705] gi|23326226|gb|AAN24800.1| 30S... |
| Match: gi|21910164|ref|NP_664432.1| |
score: 68.55 |
e-value: 3.6e-10 |
Identity: 28.33% |
Span: 540bp (30.2%) |
Frame: 1 |
| gi|21910164|ref|NP_664432.1| putative ribosomal protein S1-like DNA-binding protein [Streptococcus pyogenes MGAS315] ... |
| Match: gi|23336678|ref|ZP_00121881.1| |
score: 68.55 |
e-value: 3.6e-10 |
Identity: 28.79% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|23336678|ref|ZP_00121881.1| COG0539: Ribosomal protein S1 [Bifidobacterium longum DJO10A] |
| Match: gi|15672820|ref|NP_266994.1| |
score: 68.55 |
e-value: 3.6e-10 |
Identity: 31.82% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|15672820|ref|NP_266994.1| 30S ribosomal protein S1 [Lactococcus lactis subsp. lactis] gi|25311775|pir||F86729 30S ... |
| Match: gi|22972622|ref|ZP_00019490.1| |
score: 68.55 |
e-value: 3.6e-10 |
Identity: 26.35% |
Span: 444bp (24.8%) |
Frame: 1 |
| gi|22972622|ref|ZP_00019490.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|24213960|ref|NP_711441.1| |
score: 68.17 |
e-value: 4.7e-10 |
Identity: 39.08% |
Span: 261bp (14.6%) |
Frame: 1 |
| gi|24213960|ref|NP_711441.1| Ribosomal protein S1 [Leptospira interrogans serovar lai str. 56601] gi|24194819|gb|AAN4... |
| Match: gi|23017877|ref|ZP_00057599.1| |
score: 67.4 |
e-value: 8.1e-10 |
Identity: 27.41% |
Span: 405bp (22.6%) |
Frame: 1 |
| gi|23017877|ref|ZP_00057599.1| COG0539: Ribosomal protein S1 [Thermobifida fusca] |
| Match: gi|28211189|ref|NP_782133.1| |
score: 67.4 |
e-value: 8.1e-10 |
Identity: 29.59% |
Span: 450bp (25.2%) |
Frame: 1 |
| gi|28211189|ref|NP_782133.1| SSU ribosomal protein S1P [Clostridium tetani E88] gi|28203629|gb|AAO36070.1| SSU riboso... |
| Match: gi|18026317|gb|AAL55473.1| |
score: 67.4 |
e-value: 8.1e-10 |
Identity: 30.56% |
Span: 426bp (23.8%) |
Frame: 1 |
| gi|18026317|gb|AAL55473.1| hemin-binding protein [Prevotella intermedia] |
| Match: gi|15806981|ref|NP_295706.1| |
score: 67.01 |
e-value: 1.1e-09 |
Identity: 30.15% |
Span: 408bp (22.8%) |
Frame: 1 |
| gi|15806981|ref|NP_295706.1| ribosomal protein S1, putative [Deinococcus radiodurans] gi|7473661|pir||B75330 probable... |
| Match: gi|34498501|ref|NP_902716.1| |
score: 67.01 |
e-value: 1.1e-09 |
Identity: 29.55% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|34498501|ref|NP_902716.1| 30S ribosomal protein S1 [Chromobacterium violaceum ATCC 12472] gi|34104356|gb|AAQ60715.... |
| Match: gi|21220480|ref|NP_626259.1| |
score: 66.63 |
e-value: 1.4e-09 |
Identity: 27.41% |
Span: 405bp (22.6%) |
Frame: 1 |
| gi|21220480|ref|NP_626259.1| 30S ribosomal protein S1 [Streptomyces coelicolor A3(2)] gi|7481749|pir||T35743 ribosoma... |
| Match: gi|15639271|ref|NP_218720.1| |
score: 66.63 |
e-value: 1.4e-09 |
Identity: 31.5% |
Span: 381bp (21.3%) |
Frame: 1 |
| gi|15639271|ref|NP_218720.1| ribosomal protein S1 (rpsA) [Treponema pallidum subsp. pallidum str. Nichols] gi|7521379... |
| Match: gi|18311132|ref|NP_563066.1| |
score: 66.63 |
e-value: 1.4e-09 |
Identity: 28.89% |
Span: 405bp (22.6%) |
Frame: 1 |
| gi|18311132|ref|NP_563066.1| 30S ribosomal protein S1 [Clostridium perfringens] gi|18145815|dbj|BAB81856.1| 30S ribos... |
| Match: gi|16079345|ref|NP_390169.1| |
score: 66.63 |
e-value: 1.4e-09 |
Identity: 33.8% |
Span: 426bp (23.8%) |
Frame: 1 |
| gi|16079345|ref|NP_390169.1| alternate gene name: jofD~similar to ribosomal protein S1 homolog [Bacillus subtilis] gi... |
| Match: gi|29832775|ref|NP_827409.1| |
score: 66.63 |
e-value: 1.4e-09 |
Identity: 27.41% |
Span: 405bp (22.6%) |
Frame: 1 |
| gi|29832775|ref|NP_827409.1| putative ribosomal protein S1 [Streptomyces avermitilis MA-4680] gi|29609895|dbj|BAC7394... |
| Match: gi|22974624|ref|ZP_00020816.1| |
score: 66.24 |
e-value: 1.8e-09 |
Identity: 32.03% |
Span: 384bp (21.5%) |
Frame: 1 |
| gi|22974624|ref|ZP_00020816.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|22977358|ref|ZP_00023167.1| |
score: 65.47 |
e-value: 3.1e-09 |
Identity: 27.27% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|22977358|ref|ZP_00023167.1| COG0539: Ribosomal protein S1 [Ralstonia metallidurans] |
| Match: gi|38233738|ref|NP_939505.1| |
score: 65.47 |
e-value: 3.1e-09 |
Identity: 28.03% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|38233738|ref|NP_939505.1| 30S ribosomal protein S1 [Corynebacterium diphtheriae] gi|38199999|emb|CAE49668.1| 30S r... |
| Match: gi|17545628|ref|NP_519030.1| |
score: 65.47 |
e-value: 3.1e-09 |
Identity: 27.27% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|17545628|ref|NP_519030.1| PROBABLE 30S RIBOSOMAL SUBUNIT PROTEIN S1 [Ralstonia solanacearum] gi|17427921|emb|CAD14... |
| Match: gi|19552573|ref|NP_600575.1| |
score: 65.08 |
e-value: 4e-09 |
Identity: 27.27% |
Span: 396bp (22.1%) |
Frame: 1 |
| gi|19552573|ref|NP_600575.1| ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|21324127|dbj|BAB98752.1|... |
| Match: gi|15672820|ref|NP_266994.1| |
score: 58.92 |
e-value: 2.9e-07 |
Identity: 36.9% |
Span: 249bp (13.9%) |
Frame: 1 |
| gi|15672820|ref|NP_266994.1| 30S ribosomal protein S1 [Lactococcus lactis subsp. lactis] gi|25311775|pir||F86729 30S ... |
| Match: gi|15900746|ref|NP_345350.1| |
score: 57.77 |
e-value: 6.4e-07 |
Identity: 37.35% |
Span: 246bp (13.8%) |
Frame: 1 |
| gi|15900746|ref|NP_345350.1| ribosomal protein S1 [Streptococcus pneumoniae TIGR4] gi|25311765|pir||E95099 ribosomal ... |
| Match: gi|15902808|ref|NP_358358.1| |
score: 57.77 |
e-value: 6.4e-07 |
Identity: 37.35% |
Span: 246bp (13.8%) |
Frame: 1 |
| gi|15902808|ref|NP_358358.1| 30S Ribosomal protein S1 [Streptococcus pneumoniae R6] gi|25311763|pir||D97967 30S ribos... |
| Match: gi|34498501|ref|NP_902716.1| |
score: 57 |
e-value: 1.1e-06 |
Identity: 31.21% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|34498501|ref|NP_902716.1| 30S ribosomal protein S1 [Chromobacterium violaceum ATCC 12472] gi|34104356|gb|AAQ60715.... |
| Match: gi|24213960|ref|NP_711441.1| |
score: 56.61 |
e-value: 1.4e-06 |
Identity: 32.23% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|24213960|ref|NP_711441.1| Ribosomal protein S1 [Leptospira interrogans serovar lai str. 56601] gi|24194819|gb|AAN4... |
| Match: gi|15639271|ref|NP_218720.1| |
score: 55.84 |
e-value: 2.4e-06 |
Identity: 40.48% |
Span: 246bp (13.8%) |
Frame: 1 |
| gi|15639271|ref|NP_218720.1| ribosomal protein S1 (rpsA) [Treponema pallidum subsp. pallidum str. Nichols] gi|7521379... |
| Match: gi|15794409|ref|NP_284231.1| |
score: 54.68 |
e-value: 5.4e-06 |
Identity: 28.67% |
Span: 366bp (20.5%) |
Frame: 1 |
| gi|15794409|ref|NP_284231.1| 30S ribosomal protein S1 [Neisseria meningitidis Z2491] gi|11275274|pir||G81842 30S ribo... |
| Match: gi|15677167|ref|NP_274320.1| |
score: 54.68 |
e-value: 5.4e-06 |
Identity: 28.67% |
Span: 366bp (20.5%) |
Frame: 1 |
| gi|15677167|ref|NP_274320.1| 30S ribosomal protein S1 [Neisseria meningitidis MC58] gi|11275276|pir||G81099 30S ribos... |
| Match: gi|30249909|ref|NP_841979.1| |
score: 54.68 |
e-value: 5.4e-06 |
Identity: 30.5% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|30249909|ref|NP_841979.1| Ribosomal protein S1:S1 RNA binding domain [Nitrosomonas europaea ATCC 19718] gi|3018094... |
| Match: gi|15806981|ref|NP_295706.1| |
score: 54.3 |
e-value: 7.1e-06 |
Identity: 25.59% |
Span: 537bp (30.0%) |
Frame: 1 |
| gi|15806981|ref|NP_295706.1| ribosomal protein S1, putative [Deinococcus radiodurans] gi|7473661|pir||B75330 probable... |
| Match: gi|24379626|ref|NP_721581.1| |
score: 54.3 |
e-value: 7.1e-06 |
Identity: 30.89% |
Span: 366bp (20.5%) |
Frame: 1 |
| gi|24379626|ref|NP_721581.1| putative ribosomal protein S1; sequence specific DNA-binding protein [Streptococcus muta... |
| Match: gi|30141902|emb|CAD30282.1| |
score: 53.91 |
e-value: 9.3e-06 |
Identity: 34.92% |
Span: 372bp (20.8%) |
Frame: 1 |
| gi|30141902|emb|CAD30282.1| 30S ribosomal protein S1 [Thermus thermophilus] |
| Match: gi|21910164|ref|NP_664432.1| |
score: 53.91 |
e-value: 9.3e-06 |
Identity: 31.67% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|21910164|ref|NP_664432.1| putative ribosomal protein S1-like DNA-binding protein [Streptococcus pyogenes MGAS315] ... |
| Match: gi|22977358|ref|ZP_00023167.1| |
score: 53.53 |
e-value: 1.2e-05 |
Identity: 29.08% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|22977358|ref|ZP_00023167.1| COG0539: Ribosomal protein S1 [Ralstonia metallidurans] |
| Match: gi|16079345|ref|NP_390169.1| |
score: 53.53 |
e-value: 1.2e-05 |
Identity: 31.09% |
Span: 354bp (19.8%) |
Frame: 1 |
| gi|16079345|ref|NP_390169.1| alternate gene name: jofD~similar to ribosomal protein S1 homolog [Bacillus subtilis] gi... |
| Match: gi|15674934|ref|NP_269108.1| |
score: 53.14 |
e-value: 1.6e-05 |
Identity: 31.67% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|15674934|ref|NP_269108.1| putative ribosomal protein S1-like DNA-binding protein [Streptococcus pyogenes] gi|19745... |
| Match: gi|22537308|ref|NP_688159.1| |
score: 52.76 |
e-value: 2.1e-05 |
Identity: 30.83% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|22537308|ref|NP_688159.1| ribosomal protein S1 [Streptococcus agalactiae 2603V/R] gi|25011274|ref|NP_735669.1| Unk... |
| Match: gi|18026317|gb|AAL55473.1| |
score: 52.37 |
e-value: 2.7e-05 |
Identity: 40.22% |
Span: 270bp (15.1%) |
Frame: 1 |
| gi|18026317|gb|AAL55473.1| hemin-binding protein [Prevotella intermedia] |
| Match: gi|17545628|ref|NP_519030.1| |
score: 51.99 |
e-value: 3.5e-05 |
Identity: 29.85% |
Span: 336bp (18.8%) |
Frame: 1 |
| gi|17545628|ref|NP_519030.1| PROBABLE 30S RIBOSOMAL SUBUNIT PROTEIN S1 [Ralstonia solanacearum] gi|17427921|emb|CAD14... |
| Match: gi|22974624|ref|ZP_00020816.1| |
score: 51.99 |
e-value: 3.5e-05 |
Identity: 23.6% |
Span: 720bp (40.2%) |
Frame: 1 |
| gi|22974624|ref|ZP_00020816.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|30141902|emb|CAD30282.1| |
score: 51.6 |
e-value: 4.6e-05 |
Identity: 32.97% |
Span: 270bp (15.1%) |
Frame: 1 |
| gi|30141902|emb|CAD30282.1| 30S ribosomal protein S1 [Thermus thermophilus] |
| Match: gi|24213960|ref|NP_711441.1| |
score: 50.83 |
e-value: 7.8e-05 |
Identity: 34.57% |
Span: 237bp (13.2%) |
Frame: 1 |
| gi|24213960|ref|NP_711441.1| Ribosomal protein S1 [Leptospira interrogans serovar lai str. 56601] gi|24194819|gb|AAN4... |
| Match: gi|30019646|ref|NP_831277.1| |
score: 50.45 |
e-value: 0.0001 |
Identity: 28.07% |
Span: 339bp (18.9%) |
Frame: 1 |
| gi|30019646|ref|NP_831277.1| SSU ribosomal protein S1P [Bacillus cereus ATCC 14579] gi|29895190|gb|AAP08478.1| SSU ri... |
| Match: gi|3122814|sp|O06000|RS1H_BACCE |
score: 50.45 |
e-value: 0.0001 |
Identity: 28.07% |
Span: 339bp (18.9%) |
Frame: 1 |
| gi|3122814|sp|O06000|RS1H_BACCE 30S RIBOSOMAL PROTEIN S1 HOMOLOG gi|2094771|emb|CAA70584.1| 30S ribosomal protein S1 ... |
| Match: gi|29349753|ref|NP_813256.1| |
score: 50.06 |
e-value: 0.00013 |
Identity: 36.47% |
Span: 249bp (13.9%) |
Frame: 1 |
| gi|29349753|ref|NP_813256.1| 30S ribosomal protein S1 [Bacteroides thetaiotaomicron VPI-5482] gi|29341663|gb|AAO79450... |
| Match: gi|33597660|ref|NP_885303.1| |
score: 49.68 |
e-value: 0.00017 |
Identity: 30.77% |
Span: 378bp (21.1%) |
Frame: 1 |
| gi|33597660|ref|NP_885303.1| 30S ribosomal protein S1 [Bordetella parapertussis] gi|33602440|ref|NP_890000.1| 30S rib... |
| Match: gi|33592107|ref|NP_879751.1| |
score: 49.68 |
e-value: 0.00017 |
Identity: 30.77% |
Span: 378bp (21.1%) |
Frame: 1 |
| gi|33592107|ref|NP_879751.1| 30S ribosomal protein S1 [Bordetella pertussis] gi|33571751|emb|CAE41252.1| 30S ribosoma... |
| Match: gi|23465561|ref|NP_696164.1| |
score: 49.68 |
e-value: 0.00017 |
Identity: 30.53% |
Span: 384bp (21.5%) |
Frame: 1 |
| gi|23465561|ref|NP_696164.1| 30S ribosomal protein S1 [Bifidobacterium longum NCC2705] gi|23326226|gb|AAN24800.1| 30S... |
| Match: gi|29349753|ref|NP_813256.1| |
score: 49.29 |
e-value: 0.00023 |
Identity: 28.93% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|29349753|ref|NP_813256.1| 30S ribosomal protein S1 [Bacteroides thetaiotaomicron VPI-5482] gi|29341663|gb|AAO79450... |
| Match: gi|21399415|ref|NP_655400.1| |
score: 49.29 |
e-value: 0.00023 |
Identity: 28.07% |
Span: 339bp (18.9%) |
Frame: 1 |
| gi|21399415|ref|NP_655400.1| S1, S1 RNA binding domain [Bacillus anthracis A2012] gi|30261593|ref|NP_843970.1| riboso... |
| Match: gi|22972622|ref|ZP_00019490.1| |
score: 49.29 |
e-value: 0.00023 |
Identity: 28.95% |
Span: 339bp (18.9%) |
Frame: 1 |
| gi|22972622|ref|ZP_00019490.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|15614199|ref|NP_242502.1| |
score: 48.91 |
e-value: 0.0003 |
Identity: 30.51% |
Span: 351bp (19.6%) |
Frame: 1 |
| gi|15614199|ref|NP_242502.1| 30S ribosomal protein S1 [Bacillus halodurans] gi|25311771|pir||D83854 hypothetical prot... |
| Match: gi|23017877|ref|ZP_00057599.1| |
score: 48.14 |
e-value: 0.00051 |
Identity: 29.37% |
Span: 399bp (22.3%) |
Frame: 1 |
| gi|23017877|ref|ZP_00057599.1| COG0539: Ribosomal protein S1 [Thermobifida fusca] |
| Match: gi|21283094|ref|NP_646182.1| |
score: 46.98 |
e-value: 0.001 |
Identity: 26.89% |
Span: 354bp (19.8%) |
Frame: 1 |
| gi|21283094|ref|NP_646182.1| 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus MW2] gi|21204534|dbj|BAB95... |
| Match: gi|15924466|ref|NP_372000.1| |
score: 46.98 |
e-value: 0.001 |
Identity: 26.89% |
Span: 354bp (19.8%) |
Frame: 1 |
| gi|15924466|ref|NP_372000.1| 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus Mu50] gi|15927057|ref|NP_3... |
| Match: gi|1098565|gb|AAA97575.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 28.69% |
Span: 363bp (20.3%) |
Frame: 1 |
| gi|1098565|gb|AAA97575.1| ribosomal S1 protein |
| Match: gi|1085376|pir||JC4026 |
score: 45.44 |
e-value: 0.003 |
Identity: 28.69% |
Span: 363bp (20.3%) |
Frame: 1 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 45.44 |
e-value: 0.003 |
Identity: 28.69% |
Span: 363bp (20.3%) |
Frame: 1 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|24213960|ref|NP_711441.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 31.07% |
Span: 306bp (17.1%) |
Frame: 1 |
| gi|24213960|ref|NP_711441.1| Ribosomal protein S1 [Leptospira interrogans serovar lai str. 56601] gi|24194819|gb|AAN4... |
| Match: gi|28378535|ref|NP_785427.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 30% |
Span: 357bp (20.0%) |
Frame: 1 |
| gi|28378535|ref|NP_785427.1| ribosomal protein S1 [Lactobacillus plantarum WCFS1] gi|28271371|emb|CAD64276.1| ribosom... |
| Match: gi|1004353|gb|AAA77669.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 28.69% |
Span: 363bp (20.3%) |
Frame: 1 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|18026317|gb|AAL55473.1| |
score: 44.67 |
e-value: 0.006 |
Identity: 31.76% |
Span: 249bp (13.9%) |
Frame: 1 |
| gi|18026317|gb|AAL55473.1| hemin-binding protein [Prevotella intermedia] |
| Match: gi|23025134|ref|ZP_00064306.1| |
score: 42.74 |
e-value: 0.021 |
Identity: 30.38% |
Span: 234bp (13.1%) |
Frame: 1 |
| gi|23025134|ref|ZP_00064306.1| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|29832775|ref|NP_827409.1| |
score: 42.36 |
e-value: 0.028 |
Identity: 30.43% |
Span: 342bp (19.1%) |
Frame: 1 |
| gi|29832775|ref|NP_827409.1| putative ribosomal protein S1 [Streptomyces avermitilis MA-4680] gi|29609895|dbj|BAC7394... |
| Match: gi|21220480|ref|NP_626259.1| |
score: 42.36 |
e-value: 0.028 |
Identity: 30.43% |
Span: 342bp (19.1%) |
Frame: 1 |
| gi|21220480|ref|NP_626259.1| 30S ribosomal protein S1 [Streptomyces coelicolor A3(2)] gi|7481749|pir||T35743 ribosoma... |
| Match: gi|38233738|ref|NP_939505.1| |
score: 41.97 |
e-value: 0.036 |
Identity: 34.21% |
Span: 225bp (12.6%) |
Frame: 1 |
| gi|38233738|ref|NP_939505.1| 30S ribosomal protein S1 [Corynebacterium diphtheriae] gi|38199999|emb|CAE49668.1| 30S r... |
| Match: gi|18311132|ref|NP_563066.1| |
score: 41.2 |
e-value: 0.062 |
Identity: 31.08% |
Span: 219bp (12.2%) |
Frame: 1 |
| gi|18311132|ref|NP_563066.1| 30S ribosomal protein S1 [Clostridium perfringens] gi|18145815|dbj|BAB81856.1| 30S ribos... |
| Match: gi|23112215|ref|ZP_00097728.1| |
score: 40.82 |
e-value: 0.081 |
Identity: 34.67% |
Span: 222bp (12.4%) |
Frame: 1 |
| gi|23112215|ref|ZP_00097728.1| COG0539: Ribosomal protein S1 [Desulfitobacterium hafniense] |
|
| 310 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At1g12800.1 |
score: 527.7 |
e-value: 7e-150 |
Identity: 61.63% |
Span: 1467bp (82.0%) |
Frame: 1 |
| At1g12800.1 68408.m01343 heat shock factor protein hsf8 -related |
| Match: At3g23700.1 |
score: 89.35 |
e-value: 6.3e-18 |
Identity: 28.51% |
Span: 690bp (38.6%) |
Frame: 1 |
| At3g23700.1 68410.m02715 expressed protein |
| Match: At3g11964.1 |
score: 49.68 |
e-value: 5.5e-06 |
Identity: 23.64% |
Span: 465bp (26.0%) |
Frame: 1 |
| At3g11964.1 68410.m01325 hypothetical protein similar to putative pre-rRNA processing protein GB:AAF23213 GI:6671953 ... |
| Match: At4g31880.1 |
score: 40.05 |
e-value: 0.004 |
Identity: 24.55% |
Span: 450bp (25.2%) |
Frame: 1 |
| At4g31880.1 68411.m04125 expressed protein microtubule-associated protein 1B (MAP1B), Homo sapiens, L06237 |
| Match: At4g37820.1 |
score: 39.66 |
e-value: 0.006 |
Identity: 22.7% |
Span: 462bp (25.8%) |
Frame: 1 |
| At4g37820.1 68411.m04869 expressed protein Kaposi's sarcoma-associated herpes-like virus ORF73gene, Kaposi's sarcoma-... |
| Match: At3g23700.1 |
score: 37.35 |
e-value: 0.028 |
Identity: 27.27% |
Span: 255bp (14.3%) |
Frame: 1 |
| At3g23700.1 68410.m02715 expressed protein |
|
