| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|6682871|dbj|BAA88922.1| |
score: 386 |
e-value: 3e-158 |
Identity: 93.56% |
Span: 606bp (34.2%) |
Frame: 2 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|157341504|emb|CAO62059.1| |
score: 358 |
e-value: 6e-136 |
Identity: 86.63% |
Span: 606bp (34.2%) |
Frame: 2 |
| unnamed |
| Match: gi|6682869|dbj|BAA88921.1| |
score: 358 |
e-value: 8e-147 |
Identity: 86.57% |
Span: 603bp (34.0%) |
Frame: 2 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|2706544|emb|CAA75859.1| |
score: 341 |
e-value: 8e-130 |
Identity: 82.18% |
Span: 606bp (34.2%) |
Frame: 2 |
| Sig1 [Sinapis alba] |
| Match: gi|2385344|emb|CAA74896.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| sigma factorB [Arabidopsis thaliana] |
| Match: gi|2398851|dbj|BAA22214.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] |
| Match: gi|2565297|gb|AAB81958.1| |
score: 338 |
e-value: 9e-129 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| RNA polymerase sigma subunit 1 [Arabidopsis thaliana] |
| Match: gi|11762220|gb|AAG40388.1|AF325036_1 |
score: 338 |
e-value: 5e-128 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| At1g64860 [Arabidopsis thaliana] |
| Match: gi|15217767|ref|NP_176666.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha... |
| Match: gi|37806471|dbj|BAC99906.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| gi|37806471|dbj|BAC99906.1| putative plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37806470|dbj|BAC99905.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| gi|37806470|dbj|BAC99905.1| putative plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|2780746|dbj|BAA24364.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| gi|2780746|dbj|BAA24364.1| plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|115474937|ref|NP_001061065.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| Os08g0163400 |
| Match: gi|125560253|gb|EAZ05701.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|125602291|gb|EAZ41616.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (33.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|194699556|gb|ACF83862.1| |
score: 293 |
e-value: 2e-109 |
Identity: 70.3% |
Span: 606bp (34.2%) |
Frame: 2 |
| unknown |
| Match: gi|3893860|gb|AAC78467.1| |
score: 293 |
e-value: 2e-109 |
Identity: 70.3% |
Span: 606bp (34.2%) |
Frame: 2 |
| gi|3893860|gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays] |
| Match: gi|2624403|emb|CAA74653.1| |
score: 293 |
e-value: 6e-110 |
Identity: 70.3% |
Span: 606bp (34.2%) |
Frame: 2 |
| plastid |
| Match: gi|3769432|gb|AAC78468.1| |
score: 289 |
e-value: 4e-108 |
Identity: 71.36% |
Span: 597bp (33.7%) |
Frame: 2 |
| gi|3769432|gb|AAC78468.1| RNA polymerase sigma factor 2 [Zea mays] |
| Match: gi|4218586|emb|CAA10725.1| |
score: 285 |
e-value: 1e-106 |
Identity: 67.34% |
Span: 597bp (33.7%) |
Frame: 2 |
| gi|4218586|emb|CAA10725.1| chloroplast sigma factor [Triticum aestivum] |
| Match: gi|6682871|dbj|BAA88922.1| |
score: 199 |
e-value: 3e-158 |
Identity: 87.18% |
Span: 351bp (19.8%) |
Frame: 1 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|168036108|ref|XP_001770550.1| |
score: 194 |
e-value: 4e-67 |
Identity: 47.78% |
Span: 597bp (33.7%) |
Frame: 2 |
| plastid |
| Match: gi|6682869|dbj|BAA88921.1| |
score: 189 |
e-value: 8e-147 |
Identity: 80.34% |
Span: 351bp (19.8%) |
Frame: 1 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|157341504|emb|CAO62059.1| |
score: 153 |
e-value: 6e-136 |
Identity: 67.52% |
Span: 351bp (19.8%) |
Frame: 1 |
| unnamed |
| Match: gi|2706544|emb|CAA75859.1| |
score: 149 |
e-value: 8e-130 |
Identity: 63.25% |
Span: 351bp (19.8%) |
Frame: 1 |
| Sig1 [Sinapis alba] |
| Match: gi|15217767|ref|NP_176666.1| |
score: 149 |
e-value: 1e-128 |
Identity: 68.57% |
Span: 315bp (17.8%) |
Frame: 1 |
| SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha... |
| Match: gi|2565297|gb|AAB81958.1| |
score: 149 |
e-value: 9e-129 |
Identity: 68.57% |
Span: 315bp (17.8%) |
Frame: 1 |
| RNA polymerase sigma subunit 1 [Arabidopsis thaliana] |
| Match: gi|2398851|dbj|BAA22214.1| |
score: 149 |
e-value: 1e-128 |
Identity: 68.57% |
Span: 315bp (17.8%) |
Frame: 1 |
| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] |
| Match: gi|2385344|emb|CAA74896.1| |
score: 149 |
e-value: 1e-128 |
Identity: 68.57% |
Span: 315bp (17.8%) |
Frame: 1 |
| sigma factorB [Arabidopsis thaliana] |
| Match: gi|11762220|gb|AAG40388.1|AF325036_1 |
score: 147 |
e-value: 5e-128 |
Identity: 67.62% |
Span: 315bp (17.8%) |
Frame: 1 |
| At1g64860 [Arabidopsis thaliana] |
| Match: gi|162605994|ref|XP_001713512.1| |
score: 134 |
e-value: 9e-42 |
Identity: 39.09% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA-polymerase |
| Match: gi|19910022|dbj|BAB87262.1| |
score: 134 |
e-value: 1e-42 |
Identity: 39.09% |
Span: 585bp (33.0%) |
Frame: 2 |
| gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta] |
| Match: gi|160331013|ref|XP_001712214.1| |
score: 134 |
e-value: 1e-42 |
Identity: 38.21% |
Span: 630bp (35.6%) |
Frame: 2 |
| rpoD |
| Match: gi|2780746|dbj|BAA24364.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|2780746|dbj|BAA24364.1| plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|125560253|gb|EAZ05701.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|37806470|dbj|BAC99905.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|37806470|dbj|BAC99905.1| putative plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37806471|dbj|BAC99906.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|37806471|dbj|BAC99906.1| putative plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|125602291|gb|EAZ41616.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|115474937|ref|NP_001061065.1| |
score: 131 |
e-value: 5e-110 |
Identity: 61.06% |
Span: 339bp (19.1%) |
Frame: 1 |
| Os08g0163400 |
| Match: gi|2624403|emb|CAA74653.1| |
score: 131 |
e-value: 6e-110 |
Identity: 58.41% |
Span: 339bp (19.1%) |
Frame: 1 |
| plastid |
| Match: gi|3893860|gb|AAC78467.1| |
score: 130 |
e-value: 2e-109 |
Identity: 58.41% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|3893860|gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays] |
| Match: gi|194699556|gb|ACF83862.1| |
score: 130 |
e-value: 2e-109 |
Identity: 58.41% |
Span: 339bp (19.1%) |
Frame: 1 |
| unknown |
| Match: gi|126695861|ref|YP_001090747.1| |
score: 129 |
e-value: 5e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|33861053|ref|NP_892614.1| |
score: 129 |
e-value: 7e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|33861053|ref|NP_892614.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus subsp. pastoris ... |
| Match: gi|4218586|emb|CAA10725.1| |
score: 129 |
e-value: 1e-106 |
Identity: 57.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|4218586|emb|CAA10725.1| chloroplast sigma factor [Triticum aestivum] |
| Match: gi|123968088|ref|YP_001008946.1| |
score: 129 |
e-value: 1e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|3769432|gb|AAC78468.1| |
score: 129 |
e-value: 4e-108 |
Identity: 55.75% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|3769432|gb|AAC78468.1| RNA polymerase sigma factor 2 [Zea mays] |
| Match: gi|157412913|ref|YP_001483779.1| |
score: 129 |
e-value: 3e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|123965795|ref|YP_001010876.1| |
score: 129 |
e-value: 2e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|78778882|ref|YP_396994.1| |
score: 129 |
e-value: 3e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|33239946|ref|NP_874888.1| |
score: 128 |
e-value: 5e-40 |
Identity: 38.86% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|33239946|ref|NP_874888.1| DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) [Prochlorococcus marinus sub... |
| Match: gi|124025264|ref|YP_001014380.1| |
score: 128 |
e-value: 1e-40 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|72383665|ref|YP_293020.1| |
score: 128 |
e-value: 4e-41 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-... |
| Match: gi|159903037|ref|YP_001550381.1| |
score: 128 |
e-value: 4e-39 |
Identity: 38.86% |
Span: 573bp (32.3%) |
Frame: 2 |
| Putative |
| Match: gi|148238947|ref|YP_001224334.1| |
score: 127 |
e-value: 2e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|116075287|ref|ZP_01472547.1| |
score: 127 |
e-value: 2e-40 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|88807657|ref|ZP_01123169.1| |
score: 127 |
e-value: 2e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|113954073|ref|YP_731235.1| |
score: 127 |
e-value: 2e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|78212231|ref|YP_381010.1| |
score: 127 |
e-value: 2e-41 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|78212231|ref|YP_381010.1| Sigma-70 factor [Synechococcus sp. CC9605] >gi|78196690|gb|ABB34455.1| Sigma-70 factor [... |
| Match: gi|78185245|ref|YP_377680.1| |
score: 127 |
e-value: 3e-41 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|78185245|ref|YP_377680.1| Sigma-70 factor [Synechococcus sp. CC9902] >gi|78169539|gb|ABB26636.1| Sigma-70 factor [... |
| Match: gi|87302644|ref|ZP_01085461.1| |
score: 127 |
e-value: 3e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|116072877|ref|ZP_01470142.1| |
score: 127 |
e-value: 3e-41 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|33866315|ref|NP_897874.1| |
score: 127 |
e-value: 1e-40 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| gi|33866315|ref|NP_897874.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] gi|33639290|e... |
| Match: gi|87123878|ref|ZP_01079728.1| |
score: 127 |
e-value: 4e-40 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|194477302|ref|YP_002049481.1| |
score: 127 |
e-value: 4e-41 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|1588486|prf||2208419B |
score: 126 |
e-value: 2e-39 |
Identity: 38.07% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor |
| Match: gi|197625355|gb|EDY37914.1| |
score: 126 |
e-value: 4e-39 |
Identity: 37.82% |
Span: 573bp (32.3%) |
Frame: 2 |
| DNA-directed |
| Match: gi|148241988|ref|YP_001227145.1| |
score: 126 |
e-value: 9e-39 |
Identity: 38.34% |
Span: 573bp (32.3%) |
Frame: 2 |
| RNA |
| Match: gi|170078618|ref|YP_001735256.1| |
score: 126 |
e-value: 2e-39 |
Identity: 38.07% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor [Synechococcus sp. PCC 7002] >gi558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] >... |
| Match: gi|37523331|ref|NP_926708.1| |
score: 121 |
e-value: 4e-39 |
Identity: 37.56% |
Span: 585bp (33.0%) |
Frame: 2 |
| gi|37523331|ref|NP_926708.1| group2 RNA polymerase sigma factor [Gloeobacter violaceus] gi|35214335|dbj|BAC91703.1| g... |
| Match: gi|168036108|ref|XP_001770550.1| |
score: 87.4 |
e-value: 4e-67 |
Identity: 43.93% |
Span: 321bp (18.1%) |
Frame: 1 |
| plastid |
| Match: gi|78212231|ref|YP_381010.1| |
score: 68.6 |
e-value: 2e-41 |
Identity: 36.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|78212231|ref|YP_381010.1| Sigma-70 factor [Synechococcus sp. CC9605] >gi|78196690|gb|ABB34455.1| Sigma-70 factor [... |
| Match: gi|78185245|ref|YP_377680.1| |
score: 67.8 |
e-value: 3e-41 |
Identity: 36.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|78185245|ref|YP_377680.1| Sigma-70 factor [Synechococcus sp. CC9902] >gi|78169539|gb|ABB26636.1| Sigma-70 factor [... |
| Match: gi|116072877|ref|ZP_01470142.1| |
score: 67.8 |
e-value: 3e-41 |
Identity: 36.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|37523331|ref|NP_926708.1| |
score: 67.4 |
e-value: 4e-39 |
Identity: 33.33% |
Span: 333bp (18.8%) |
Frame: 1 |
| gi|37523331|ref|NP_926708.1| group2 RNA polymerase sigma factor [Gloeobacter violaceus] gi|35214335|dbj|BAC91703.1| g... |
| Match: gi|194477302|ref|YP_002049481.1| |
score: 67.4 |
e-value: 4e-41 |
Identity: 35.65% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|72383665|ref|YP_293020.1| |
score: 66.6 |
e-value: 4e-41 |
Identity: 37.39% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-... |
| Match: gi|19910022|dbj|BAB87262.1| |
score: 66.2 |
e-value: 1e-42 |
Identity: 34.19% |
Span: 348bp (19.6%) |
Frame: 1 |
| gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta] |
| Match: gi|33866315|ref|NP_897874.1| |
score: 65.9 |
e-value: 1e-40 |
Identity: 35.65% |
Span: 339bp (19.1%) |
Frame: 1 |
| gi|33866315|ref|NP_897874.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] gi|33639290|e... |
| Match: gi|116075287|ref|ZP_01472547.1| |
score: 65.5 |
e-value: 2e-40 |
Identity: 36.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|160331013|ref|XP_001712214.1| |
score: 65.5 |
e-value: 1e-42 |
Identity: 33.33% |
Span: 348bp (19.6%) |
Frame: 1 |
| rpoD |
| Match: gi|124025264|ref|YP_001014380.1| |
score: 65.1 |
e-value: 1e-40 |
Identity: 36.52% |
Span: 339bp (19.1%) |
Frame: 1 |
| Putative |
| Match: gi|87123878|ref|ZP_01079728.1| |
score: 64.3 |
e-value: 4e-40 |
Identity: 35.65% |
Span: 339bp (19.1%) |
Frame: 1 |
| Sigma-70 |
| Match: gi|33239946|ref|NP_874888.1| |
score: 63.5 |
e-value: 5e-40 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| gi|33239946|ref|NP_874888.1| DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) [Prochlorococcus marinus sub... |
| Match: gi|170078618|ref|YP_001735256.1| |
score: 63.2 |
e-value: 2e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| RNA polymerase sigma factor [Synechococcus sp. PCC 7002] >gi558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] >... |
| Match: gi|162605994|ref|XP_001713512.1| |
score: 63.2 |
e-value: 9e-42 |
Identity: 35.24% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA-polymerase |
| Match: gi|1588486|prf||2208419B |
score: 63.2 |
e-value: 2e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| RNA polymerase sigma factor |
| Match: gi|197625355|gb|EDY37914.1| |
score: 62.4 |
e-value: 4e-39 |
Identity: 35.65% |
Span: 339bp (19.1%) |
Frame: 1 |
| DNA-directed |
| Match: gi|88807657|ref|ZP_01123169.1| |
score: 62 |
e-value: 2e-39 |
Identity: 34.78% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|113954073|ref|YP_731235.1| |
score: 62 |
e-value: 2e-39 |
Identity: 34.78% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|148238947|ref|YP_001224334.1| |
score: 62 |
e-value: 2e-39 |
Identity: 34.78% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|87302644|ref|ZP_01085461.1| |
score: 61.2 |
e-value: 3e-39 |
Identity: 34.78% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|148241988|ref|YP_001227145.1| |
score: 61.2 |
e-value: 9e-39 |
Identity: 34.78% |
Span: 339bp (19.1%) |
Frame: 1 |
| RNA |
| Match: gi|123968088|ref|YP_001008946.1| |
score: 60.5 |
e-value: 1e-39 |
Identity: 35.51% |
Span: 321bp (18.1%) |
Frame: 1 |
| Putative |
| Match: gi|159903037|ref|YP_001550381.1| |
score: 60.5 |
e-value: 4e-39 |
Identity: 33.91% |
Span: 339bp (19.1%) |
Frame: 1 |
| Putative |
| Match: gi|123965795|ref|YP_001010876.1| |
score: 59.7 |
e-value: 2e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| Putative |
| Match: gi|78778882|ref|YP_396994.1| |
score: 59.3 |
e-value: 3e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| Sigma-70 |
| Match: gi|157412913|ref|YP_001483779.1| |
score: 59.3 |
e-value: 3e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| Putative |
| Match: gi|126695861|ref|YP_001090747.1| |
score: 58.5 |
e-value: 5e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| Putative |
| Match: gi|33861053|ref|NP_892614.1| |
score: 58.2 |
e-value: 7e-39 |
Identity: 34.58% |
Span: 321bp (18.1%) |
Frame: 1 |
| gi|33861053|ref|NP_892614.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus subsp. pastoris ... |
|
| 400 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At1G64860.1 |
score: 338 |
e-value: 8e-131 |
Identity: 81.19% |
Span: 606bp (34.2%) |
Frame: 2 |
| Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip... |
| Match: At1G64860.1 |
score: 149 |
e-value: 8e-131 |
Identity: 68.57% |
Span: 315bp (17.8%) |
Frame: 1 |
| Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip... |
| Match: At5G13730.1 |
score: 113 |
e-value: 8e-30 |
Identity: 40.53% |
Span: 564bp (31.8%) |
Frame: 2 |
| Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:... |
| Match: At1G08540.1 |
score: 104 |
e-value: 1e-33 |
Identity: 33.66% |
Span: 600bp (33.9%) |
Frame: 2 |
| Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |... |
| Match: At2G30570.1 |
score: 93.2 |
e-value: 5e-19 |
Identity: 84% |
Span: 150bp (8.5%) |
Frame: 2 |
| Symbols: PSBW | photosystem II reaction center W (PsbW) protein-related | chr2:13026403-13027130 REVERSE |
| Match: At2G30570.2 |
score: 93.2 |
e-value: 5e-19 |
Identity: 84% |
Span: 150bp (8.5%) |
Frame: 2 |
| Symbols: PSBW | photosystem II reaction center W (PsbW) protein-related | chr2:13026403-13027130 REVERSE |
| Match: At2G36990.1 |
score: 86.3 |
e-value: 1e-29 |
Identity: 30.15% |
Span: 591bp (33.4%) |
Frame: 2 |
| Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At3G53920.1 |
score: 78.2 |
e-value: 2e-14 |
Identity: 28.79% |
Span: 585bp (33.0%) |
Frame: 2 |
| Symbols: SIG3, SIGC | SIGC (RNA polymerase sigma subunit C); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At5G24120.1 |
score: 67 |
e-value: 4e-11 |
Identity: 29.06% |
Span: 600bp (33.9%) |
Frame: 2 |
| Symbols: SIG5, SIGE | SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor... |
| Match: At2G36990.1 |
score: 63.5 |
e-value: 1e-29 |
Identity: 35.58% |
Span: 312bp (17.6%) |
Frame: 1 |
| Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At1G08540.1 |
score: 58.5 |
e-value: 1e-33 |
Identity: 32.48% |
Span: 348bp (19.6%) |
Frame: 1 |
| Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |... |
| Match: At5G13730.1 |
score: 36.6 |
e-value: 8e-30 |
Identity: 30.36% |
Span: 336bp (19.0%) |
Frame: 1 |
| Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:... |
|
| swissprot [blastx] | Showing best 100 hits recorded |
| Match: O33662 |
score: 129 |
e-value: 7e-34 |
Identity: 36.55% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Streptococcus mutans GN=rpoD PE=3 SV=1 |
| Match: Q92BQ6 |
score: 126 |
e-value: 6e-33 |
Identity: 36.82% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Listeria innocua GN=rpoD PE=3 SV=1 |
| Match: O66381 |
score: 126 |
e-value: 5e-32 |
Identity: 35.78% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Bacillus halodurans GN=sigA PE=3 SV=2 |
| Match: P52328 |
score: 126 |
e-value: 4e-32 |
Identity: 36.27% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Bacillus sp. GN=sigA PE=3 SV=1 |
| Match: P52331 |
score: 126 |
e-value: 6e-33 |
Identity: 36.82% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Listeria monocytogenes GN=rpoD PE=3 SV=1 |
| Match: Q5HNY7 |
score: 125 |
e-value: 5e-32 |
Identity: 36.04% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpoD PE=3 SV=1 |
| Match: P0A4J0 |
score: 125 |
e-value: 2e-32 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpoD PE=3 SV=1 |
| Match: P0A4I9 |
score: 125 |
e-value: 2e-32 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae GN=rpoD PE=3 SV=1 |
| Match: P06224 |
score: 125 |
e-value: 7e-31 |
Identity: 35.32% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Bacillus subtilis GN=sigA PE=1 SV=2 |
| Match: Q8CP24 |
score: 125 |
e-value: 5e-32 |
Identity: 36.04% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpoD PE=3 SV=1 |
| Match: Q6GGD8 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MRSA252) GN=rpoD PE=3 SV=1 |
| Match: P0A0I9 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MW2) GN=rpoD PE=3 SV=1 |
| Match: Q6G905 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MSSA476) GN=rpoD PE=3 SV=1 |
| Match: Q99TT5 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain N315) GN=rpoD PE=1 SV=1 |
| Match: Q5HFJ9 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain COL) GN=rpoD PE=3 SV=1 |
| Match: P0A0I8 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpoD PE=1 SV=1 |
| Match: Q04506 |
score: 124 |
e-value: 4e-32 |
Identity: 35.03% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Lactococcus lactis subsp. lactis GN=rpoD |
| Match: P0A0J0 |
score: 124 |
e-value: 1e-31 |
Identity: 35.53% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain NCTC 8325) GN=rpoD PE=3 SV=1 |
| Match: P52329 |
score: 123 |
e-value: 6e-32 |
Identity: 34.83% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Enterococcus faecalis GN=rpoD PE=3 SV=2 |
| Match: P74565 |
score: 122 |
e-value: 1e-31 |
Identity: 37.56% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Synechocystis sp. (strain PCC 6803) GN=rpoD PE=3 SV=1 |
| Match: P38023 |
score: 122 |
e-value: 3e-38 |
Identity: 38.54% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpoD1 |
| Match: P52322 |
score: 120 |
e-value: 1e-31 |
Identity: 37.06% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD1 OS=Microcystis aeruginosa GN=rpoD1 PE=3 SV=1 |
| Match: P26683 |
score: 120 |
e-value: 3e-38 |
Identity: 36.55% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Anabaena sp. (strain PCC 7120) GN=rpoD PE=3 SV=1 |
| Match: P58290 |
score: 120 |
e-value: 3e-31 |
Identity: 34.52% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD (Fragment) OS=Lactococcus lactis subsp. cremoris GN=rpoD |
| Match: Q9Z7F0 |
score: 119 |
e-value: 5e-30 |
Identity: 34.33% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Chlamydia pneumoniae GN=rpoD PE=3 SV=1 |
| Match: P77994 |
score: 118 |
e-value: 9e-31 |
Identity: 32.34% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Thermotoga maritima GN=rpoD PE=1 SV=3 |
| Match: P33656 |
score: 118 |
e-value: 2e-30 |
Identity: 35.03% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Clostridium acetobutylicum GN=rpoD PE=3 SV=1 |
| Match: P56835 |
score: 117 |
e-value: 2e-29 |
Identity: 34.33% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Chlamydia muridarum GN=rpoD PE=3 SV=1 |
| Match: P18333 |
score: 116 |
e-value: 3e-29 |
Identity: 33.83% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Chlamydia trachomatis GN=rpoD PE=3 SV=2 |
| Match: Q1RKH7 |
score: 115 |
e-value: 9e-30 |
Identity: 32.84% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rickettsia bellii (strain RML369-C) GN=rpoD |
| Match: P33118 |
score: 115 |
e-value: 2e-34 |
Identity: 36.68% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor sigB OS=Corynebacterium diphtheriae GN=sigB PE=3 SV=2 |
| Match: Q92FZ8 |
score: 114 |
e-value: 2e-30 |
Identity: 32.84% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rickettsia conorii GN=rpoD |
| Match: P33451 |
score: 114 |
e-value: 5e-30 |
Identity: 32.84% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rickettsia prowazekii GN=rpoD |
| Match: Q03066 |
score: 114 |
e-value: 3e-30 |
Identity: 35.57% |
Span: 576bp (32.5%) |
Frame: 2 |
| RNA polymerase sigma-C factor OS=Anabaena sp. (strain PCC 7120) GN=sigC PE=3 SV=2 |
| Match: Q68VQ5 |
score: 114 |
e-value: 5e-30 |
Identity: 32.84% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rickettsia typhi GN=rpoD |
| Match: Q4UJT1 |
score: 114 |
e-value: 2e-30 |
Identity: 32.84% |
Span: 591bp (33.4%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rickettsia felis GN=rpoD |
| Match: P33452 |
score: 113 |
e-value: 1e-28 |
Identity: 31.53% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpoD PE=3 SV=2 |
| Match: O83506 |
score: 113 |
e-value: 2e-28 |
Identity: 31.84% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Treponema pallidum GN=rpoD PE=3 SV=1 |
| Match: Q59753 |
score: 113 |
e-value: 6e-29 |
Identity: 31.53% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Rhizobium meliloti GN=rpoD PE=3 SV=1 |
| Match: P55993 |
score: 112 |
e-value: 3e-30 |
Identity: 33.16% |
Span: 561bp (31.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Helicobacter pylori GN=rpoD PE=3 SV=1 |
| Match: P59117 |
score: 112 |
e-value: 8e-29 |
Identity: 31.98% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Leptospira interrogans GN=rpoD PE=3 SV=1 |
| Match: Q9ZMY3 |
score: 112 |
e-value: 3e-30 |
Identity: 33.16% |
Span: 561bp (31.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Helicobacter pylori J99 GN=rpoD PE=3 SV=1 |
| Match: P61540 |
score: 112 |
e-value: 8e-29 |
Identity: 31.98% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpoD ... |
| Match: P27785 |
score: 111 |
e-value: 2e-33 |
Identity: 34.83% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Streptomyces aureofaciens GN=rpoD PE=3 SV=1 |
| Match: P0A602 |
score: 110 |
e-value: 1e-31 |
Identity: 32.99% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Mycobacterium tuberculosis GN=rpoD PE=3 SV=1 |
| Match: P0A603 |
score: 110 |
e-value: 1e-31 |
Identity: 32.99% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase sigma factor rpoD OS=Mycobacterium bovis GN=rpoD PE=3 SV=1 |
| Match: P18182 |
score: 109 |
e-value: 1e-32 |
Identity: 33.83% |
Span: 597bp (33.7%) |
Frame: 2 |
| RNA polymerase principal sigma factor hrdA OS=Streptomyces coelicolor GN=hrdA PE=3 SV=2 |
| Match: Q03065 |
score: 109 |
e-value: 2e-32 |
Identity: 34.92% |
Span: 561bp (31.7%) |
Frame: 2 |
| RNA polymerase sigma-B factor OS=Anabaena sp. (strain PCC 7120) GN=sigB PE=3 SV=1 |
| Match: P18183 |
score: 108 |
e-value: 3e-30 |
Identity: 31.98% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase principal sigma factor hrdB OS=Streptomyces coelicolor GN=hrdB PE=3 SV=2 |
| Match: P77951 |
score: 108 |
e-value: 4e-30 |
Identity: 31.98% |
Span: 585bp (33.0%) |
Frame: 2 |
| RNA polymerase principal sigma factor hrdB OS=Streptomyces griseus GN=hrdB PE=1 SV=1 |
| Match: P26683 |
score: 60.8 |
e-value: 3e-38 |
Identity: 33.64% |
Span: 321bp (18.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Anabaena sp. (strain PCC 7120) GN=rpoD PE=3 SV=1 |
| Match: P38023 |
score: 59.7 |
e-value: 3e-38 |
Identity: 33.64% |
Span: 321bp (18.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpoD1 |
| Match: P27785 |
score: 54.3 |
e-value: 2e-33 |
Identity: 34.95% |
Span: 309bp (17.4%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Streptomyces aureofaciens GN=rpoD PE=3 SV=1 |
| Match: P18182 |
score: 53.9 |
e-value: 1e-32 |
Identity: 34.62% |
Span: 309bp (17.4%) |
Frame: 1 |
| RNA polymerase principal sigma factor hrdA OS=Streptomyces coelicolor GN=hrdA PE=3 SV=2 |
| Match: P33118 |
score: 53.1 |
e-value: 2e-34 |
Identity: 34.62% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA polymerase sigma factor sigB OS=Corynebacterium diphtheriae GN=sigB PE=3 SV=2 |
| Match: Q03065 |
score: 53.1 |
e-value: 2e-32 |
Identity: 27.72% |
Span: 303bp (17.1%) |
Frame: 1 |
| RNA polymerase sigma-B factor OS=Anabaena sp. (strain PCC 7120) GN=sigB PE=3 SV=1 |
| Match: P0A602 |
score: 49.3 |
e-value: 1e-31 |
Identity: 31.78% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Mycobacterium tuberculosis GN=rpoD PE=3 SV=1 |
| Match: P0A603 |
score: 49.3 |
e-value: 1e-31 |
Identity: 31.78% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Mycobacterium bovis GN=rpoD PE=3 SV=1 |
| Match: P18183 |
score: 46.6 |
e-value: 3e-30 |
Identity: 30.77% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA polymerase principal sigma factor hrdB OS=Streptomyces coelicolor GN=hrdB PE=3 SV=2 |
| Match: P77951 |
score: 46.2 |
e-value: 4e-30 |
Identity: 30.77% |
Span: 312bp (17.6%) |
Frame: 1 |
| RNA polymerase principal sigma factor hrdB OS=Streptomyces griseus GN=hrdB PE=1 SV=1 |
| Match: P55993 |
score: 42 |
e-value: 3e-30 |
Identity: 31.4% |
Span: 258bp (14.6%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Helicobacter pylori GN=rpoD PE=3 SV=1 |
| Match: Q9ZMY3 |
score: 42 |
e-value: 3e-30 |
Identity: 31.4% |
Span: 258bp (14.6%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Helicobacter pylori J99 GN=rpoD PE=3 SV=1 |
| Match: Q92FZ8 |
score: 41.2 |
e-value: 2e-30 |
Identity: 26.79% |
Span: 324bp (18.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rickettsia conorii GN=rpoD |
| Match: Q4UJT1 |
score: 40.8 |
e-value: 2e-30 |
Identity: 26.79% |
Span: 324bp (18.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rickettsia felis GN=rpoD |
| Match: Q03066 |
score: 40.8 |
e-value: 3e-30 |
Identity: 27.84% |
Span: 225bp (12.7%) |
Frame: 1 |
| RNA polymerase sigma-C factor OS=Anabaena sp. (strain PCC 7120) GN=sigC PE=3 SV=2 |
| Match: Q68VQ5 |
score: 39.7 |
e-value: 5e-30 |
Identity: 25.89% |
Span: 324bp (18.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rickettsia typhi GN=rpoD |
| Match: P33451 |
score: 39.7 |
e-value: 5e-30 |
Identity: 25.89% |
Span: 324bp (18.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rickettsia prowazekii GN=rpoD |
| Match: P52322 |
score: 38.9 |
e-value: 1e-31 |
Identity: 34.25% |
Span: 219bp (12.4%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD1 OS=Microcystis aeruginosa GN=rpoD1 PE=3 SV=1 |
| Match: P77994 |
score: 38.1 |
e-value: 9e-31 |
Identity: 59.38% |
Span: 96bp (5.4%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Thermotoga maritima GN=rpoD PE=1 SV=3 |
| Match: P61540 |
score: 38.1 |
e-value: 8e-29 |
Identity: 31.03% |
Span: 240bp (13.5%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpoD ... |
| Match: P59117 |
score: 38.1 |
e-value: 8e-29 |
Identity: 31.03% |
Span: 240bp (13.5%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Leptospira interrogans GN=rpoD PE=3 SV=1 |
| Match: Q1RKH7 |
score: 38.1 |
e-value: 9e-30 |
Identity: 25.89% |
Span: 324bp (18.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rickettsia bellii (strain RML369-C) GN=rpoD |
| Match: P0A4J0 |
score: 37.4 |
e-value: 2e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpoD PE=3 SV=1 |
| Match: Q92BQ6 |
score: 37.4 |
e-value: 6e-33 |
Identity: 34.72% |
Span: 210bp (11.9%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Listeria innocua GN=rpoD PE=3 SV=1 |
| Match: P0A4I9 |
score: 37.4 |
e-value: 2e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae GN=rpoD PE=3 SV=1 |
| Match: O33662 |
score: 37.4 |
e-value: 7e-34 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Streptococcus mutans GN=rpoD PE=3 SV=1 |
| Match: Q04506 |
score: 37.4 |
e-value: 4e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Lactococcus lactis subsp. lactis GN=rpoD |
| Match: P52331 |
score: 37.4 |
e-value: 6e-33 |
Identity: 34.72% |
Span: 210bp (11.9%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Listeria monocytogenes GN=rpoD PE=3 SV=1 |
| Match: Q59753 |
score: 37.4 |
e-value: 6e-29 |
Identity: 33.33% |
Span: 159bp (9.0%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Rhizobium meliloti GN=rpoD PE=3 SV=1 |
| Match: P52329 |
score: 37.4 |
e-value: 6e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Enterococcus faecalis GN=rpoD PE=3 SV=2 |
| Match: P58290 |
score: 37.4 |
e-value: 3e-31 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD (Fragment) OS=Lactococcus lactis subsp. cremoris GN=rpoD |
| Match: P33656 |
score: 37 |
e-value: 2e-30 |
Identity: 59.38% |
Span: 96bp (5.4%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Clostridium acetobutylicum GN=rpoD PE=3 SV=1 |
| Match: P74565 |
score: 37 |
e-value: 1e-31 |
Identity: 30.85% |
Span: 282bp (15.9%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Synechocystis sp. (strain PCC 6803) GN=rpoD PE=3 SV=1 |
| Match: P33452 |
score: 36.2 |
e-value: 1e-28 |
Identity: 41.67% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpoD PE=3 SV=2 |
| Match: O83506 |
score: 35.4 |
e-value: 2e-28 |
Identity: 28.85% |
Span: 243bp (13.7%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Treponema pallidum GN=rpoD PE=3 SV=1 |
| Match: Q5HNY7 |
score: 35.4 |
e-value: 5e-32 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpoD PE=3 SV=1 |
| Match: Q8CP24 |
score: 35.4 |
e-value: 5e-32 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpoD PE=3 SV=1 |
| Match: P0A0I9 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MW2) GN=rpoD PE=3 SV=1 |
| Match: Q99TT5 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain N315) GN=rpoD PE=1 SV=1 |
| Match: P0A0I8 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpoD PE=1 SV=1 |
| Match: Q5HFJ9 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain COL) GN=rpoD PE=3 SV=1 |
| Match: Q6G905 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MSSA476) GN=rpoD PE=3 SV=1 |
| Match: P0A0J0 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain NCTC 8325) GN=rpoD PE=3 SV=1 |
| Match: Q6GGD8 |
score: 35 |
e-value: 1e-31 |
Identity: 48.65% |
Span: 111bp (6.3%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MRSA252) GN=rpoD PE=3 SV=1 |
| Match: Q9Z7F0 |
score: 34.7 |
e-value: 5e-30 |
Identity: 44.44% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Chlamydia pneumoniae GN=rpoD PE=3 SV=1 |
| Match: O66381 |
score: 34.7 |
e-value: 5e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Bacillus halodurans GN=sigA PE=3 SV=2 |
| Match: P52328 |
score: 34.7 |
e-value: 4e-32 |
Identity: 50% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Bacillus sp. GN=sigA PE=3 SV=1 |
| Match: P18333 |
score: 34.7 |
e-value: 3e-29 |
Identity: 44.44% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Chlamydia trachomatis GN=rpoD PE=3 SV=2 |
| Match: P56835 |
score: 34.7 |
e-value: 2e-29 |
Identity: 44.44% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Chlamydia muridarum GN=rpoD PE=3 SV=1 |
| Match: P06224 |
score: 31.6 |
e-value: 7e-31 |
Identity: 44.44% |
Span: 108bp (6.1%) |
Frame: 1 |
| RNA polymerase sigma factor rpoD OS=Bacillus subtilis GN=sigA PE=1 SV=2 |
|
| 77 lower scoring hits censored -- only 100 best hits are stored. |