| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At3G25430.1 |
score: 274 |
e-value: 1e-73 |
Identity: 44.41% |
Span: 978bp (60.8%) |
Frame: 1 |
| CAF1 family ribonuclease | chr3:9222441-9224937 FORWARD |
| Match: At1G55870.1 |
score: 76.6 |
e-value: 4e-14 |
Identity: 27.78% |
Span: 639bp (39.7%) |
Frame: 1 |
| Symbols: ATPARN, AHG2 | AHG2/ATPARN; ribonuclease | chr1:20899329-20901710 FORWARD |
|
| genbank/nr [blastx] | Showing best 37 hits recorded |
| Match: gi|15230837|ref|NP_189170.1| |
score: 274 |
e-value: 1e-71 |
Identity: 44.41% |
Span: 978bp (60.8%) |
Frame: 1 |
| CAF1 family ribonuclease [Arabidopsis thaliana] >gi75162449|sp|Q8W4C3.1|PARNL_ARATH RecName: Full=Poly(A)-specific ri... |
| Match: gi|9279724|dbj|BAB01314.1| |
score: 264 |
e-value: 8e-69 |
Identity: 44.73% |
Span: 924bp (57.5%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|65736526|dbj|BAD98514.1| |
score: 92.4 |
e-value: 5e-17 |
Identity: 27.43% |
Span: 879bp (54.7%) |
Frame: 1 |
| gi|65736526|dbj|BAD98514.1| poly(A)-specific ribonuclease [Arabidopsis thaliana] >gi|60390594|sp|Q9LG26|PARN_ARATH Po... |
| Match: gi|78484002|dbj|BAE47490.1| |
score: 92.4 |
e-value: 5e-17 |
Identity: 27.43% |
Span: 879bp (54.7%) |
Frame: 1 |
| gi|78484002|dbj|BAE47490.1| polyA specific ribonuclease [Arabidopsis thaliana] |
| Match: gi|78484000|dbj|BAE47489.1| |
score: 92.4 |
e-value: 5e-17 |
Identity: 27.43% |
Span: 879bp (54.7%) |
Frame: 1 |
| polyA specific ribonuclease [Arabidopsis thaliana] |
| Match: gi|57834081|emb|CAE05998.4| |
score: 76.6 |
e-value: 3e-12 |
Identity: 23.91% |
Span: 927bp (57.6%) |
Frame: 1 |
| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|42562770|ref|NP_175983.2| |
score: 76.6 |
e-value: 3e-12 |
Identity: 27.78% |
Span: 639bp (39.7%) |
Frame: 1 |
| gi|42562770|ref|NP_175983.2| CAF1 family ribonuclease [Arabidopsis thaliana] |
| Match: gi|50924920|ref|XP_472803.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 23.91% |
Span: 927bp (57.6%) |
Frame: 1 |
| gi|50924920|ref|XP_472803.1| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8778305|gb|AAF79314.1| |
score: 69.7 |
e-value: 4e-10 |
Identity: 30.99% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|8778305|gb|AAF79314.1| F14J16.11 [Arabidopsis thaliana] |
| Match: gi|47218930|emb|CAF98128.1| |
score: 61.2 |
e-value: 1e-07 |
Identity: 31.61% |
Span: 441bp (27.4%) |
Frame: 1 |
| gi|47218930|emb|CAF98128.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|29791562|gb|AAH50496.1| |
score: 60.5 |
e-value: 2e-07 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|29791562|gb|AAH50496.1| Similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Danio rerio] |
| Match: gi|60390548|sp|Q7ZU92|PARN_BRARE |
score: 60.5 |
e-value: 2e-07 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|60390548|sp|Q7ZU92|PARN_BRARE Poly(A)-specific ribonuclease PARN (Polyadenylate-specific ribonuclease) |
| Match: gi|37681897|gb|AAQ97826.1| |
score: 60.5 |
e-value: 2e-07 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|37681897|gb|AAQ97826.1| poly(A)-specific ribonuclease [Danio rerio] |
| Match: gi|68533833|gb|AAH99137.1| |
score: 55.5 |
e-value: 7e-06 |
Identity: 30.99% |
Span: 213bp (13.2%) |
Frame: 1 |
| Poly(A)-specific |
| Match: gi|73958883|ref|XP_536966.2| |
score: 55.5 |
e-value: 7e-06 |
Identity: 30.82% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|73958883|ref|XP_536966.2| PREDICTED: similar to poly(A)-specific ribonuclease (deadenylation nuclease) isoform 1 [... |
| Match: gi|89273974|emb|CAJ81781.1| |
score: 54.7 |
e-value: 1e-05 |
Identity: 30.82% |
Span: 414bp (25.7%) |
Frame: 1 |
| Novel |
| Match: gi|18256918|gb|AAH21899.1| |
score: 54.3 |
e-value: 2e-05 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|18256918|gb|AAH21899.1| Parn protein [Mus musculus] |
| Match: gi|21311877|ref|NP_083037.1| |
score: 54.3 |
e-value: 2e-05 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| poly(A)-specific |
| Match: gi|74141205|dbj|BAE35913.1| |
score: 54.3 |
e-value: 2e-05 |
Identity: 32.19% |
Span: 414bp (25.7%) |
Frame: 1 |
| unnamed |
| Match: gi|55727812|emb|CAH90659.1| |
score: 54.3 |
e-value: 2e-05 |
Identity: 31.51% |
Span: 414bp (25.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|21751916|dbj|BAC04070.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 28.95% |
Span: 342bp (21.3%) |
Frame: 1 |
| gi|21751916|dbj|BAC04070.1| unnamed protein product [Homo sapiens] |
| Match: gi|27735155|ref|NP_775787.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 28.95% |
Span: 342bp (21.3%) |
Frame: 1 |
| gi|27735155|ref|NP_775787.1| hypothetical protein FLJ40240 [Homo sapiens] gi|21757367|dbj|BAC05101.1| unnamed protein... |
| Match: gi|71894805|ref|NP_001025800.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 30.14% |
Span: 414bp (25.7%) |
Frame: 1 |
| poly(A)-specific |
| Match: gi|73946208|ref|XP_541182.2| |
score: 53.9 |
e-value: 2e-05 |
Identity: 24.39% |
Span: 447bp (27.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55731677|emb|CAH92544.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 28.95% |
Span: 342bp (21.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|94403306|ref|XP_982998.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 32.31% |
Span: 195bp (12.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|49115955|gb|AAH73682.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 27.43% |
Span: 501bp (31.2%) |
Frame: 1 |
| gi|49115955|gb|AAH73682.1| Unknown (protein for IMAGE:5572400) [Xenopus laevis] |
| Match: gi|14495249|gb|AAK64218.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 27.43% |
Span: 501bp (31.2%) |
Frame: 1 |
| gi|14495249|gb|AAK64218.1| poly(A)-specific ribonuclease [Xenopus laevis] |
| Match: gi|66820356|ref|XP_643803.1| |
score: 53.5 |
e-value: 3e-05 |
Identity: 27.37% |
Span: 285bp (17.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|46329632|gb|AAH68919.1| |
score: 53.5 |
e-value: 3e-05 |
Identity: 34.55% |
Span: 321bp (20.0%) |
Frame: 1 |
| gi|46329632|gb|AAH68919.1| Parn-A protein [Xenopus laevis] |
| Match: gi|85544063|pdb|2A1S|D |
score: 53.1 |
e-value: 4e-05 |
Identity: 31.51% |
Span: 414bp (25.7%) |
Frame: 1 |
| Chain |
| Match: gi|55643449|ref|XP_510832.1| |
score: 53.1 |
e-value: 4e-05 |
Identity: 31.51% |
Span: 414bp (25.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|4505611|ref|NP_002573.1| |
score: 53.1 |
e-value: 4e-05 |
Identity: 31.51% |
Span: 414bp (25.7%) |
Frame: 1 |
| gi|4505611|ref|NP_002573.1| poly(A)-specific ribonuclease (deadenylation nuclease); deadenylation nuclease [Homo sapi... |
| Match: gi|71031200|ref|XP_765242.1| |
score: 52.8 |
e-value: 5e-05 |
Identity: 29.35% |
Span: 267bp (16.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|76626318|ref|XP_872807.1| |
score: 52.8 |
e-value: 5e-05 |
Identity: 24.39% |
Span: 447bp (27.8%) |
Frame: 1 |
| gi|76626318|ref|XP_872807.1| PREDICTED: similar to poly(A)-specific ribonuclease (PARN)-like domain containing 1, par... |
| Match: gi|55627678|ref|XP_518838.1| |
score: 52.4 |
e-value: 6e-05 |
Identity: 32.31% |
Span: 195bp (12.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|65302200|emb|CAI74307.1| |
score: 52 |
e-value: 8e-05 |
Identity: 30.43% |
Span: 267bp (16.6%) |
Frame: 1 |
| gi|65302200|emb|CAI74307.1| hypothetical protein, conserved [Theileria annulata] |
|
| 41 lower scoring hits censored -- only 37 best hits are stored. |
