| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|68300812|gb|AAY89347.1| |
score: 848 |
e-value: 0 |
Identity: 93.89% |
Span: 1326bp (83.0%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Petunia x hybrida] |
| Match: gi|70794966|gb|AAZ08457.1| |
score: 847 |
e-value: 0 |
Identity: 93.42% |
Span: 1323bp (82.8%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Rhododendron macrophyllum] |
| Match: gi|11134656|sp|Q42877.1|RPB2_SOLLC |
score: 847 |
e-value: 0 |
Identity: 93.67% |
Span: 1326bp (83.0%) |
Frame: 3 |
| RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA polymerase II subunit B2; Short=RNA polymerase I... |
| Match: gi|68300814|gb|AAY89348.1| |
score: 845 |
e-value: 0 |
Identity: 93.88% |
Span: 1323bp (82.8%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Antirrhinum majus] |
| Match: gi|255556051|ref|XP_002519060.1| |
score: 844 |
e-value: 0 |
Identity: 93.44% |
Span: 1326bp (83.0%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] >gi223541723|gb|EEF43271.1| DNA-directed RNA poly... |
| Match: gi|225446351|ref|XP_002274051.1| |
score: 843 |
e-value: 0 |
Identity: 92.99% |
Span: 1326bp (83.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147841183|emb|CAN72948.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|68300810|gb|AAY89346.1| |
score: 839 |
e-value: 0 |
Identity: 94.04% |
Span: 1308bp (81.9%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Nicotiana sylvestris] |
| Match: gi|16486|emb|CAA79528.1| |
score: 837 |
e-value: 0 |
Identity: 94.27% |
Span: 1308bp (81.9%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Arabidopsis thaliana] |
| Match: gi|15234572|ref|NP_193902.1| |
score: 837 |
e-value: 0 |
Identity: 94.27% |
Span: 1308bp (81.9%) |
Frame: 3 |
| NRPB2; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21542437|sp|P38420.2|RPB2_ARATH RecName: F... |
| Match: gi|70794986|gb|AAZ08467.1| |
score: 837 |
e-value: 0 |
Identity: 93.2% |
Span: 1323bp (82.8%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Linanthus californicus] |
| Match: gi|222625458|gb|EEE59590.1| |
score: 837 |
e-value: 0 |
Identity: 93.42% |
Span: 1323bp (82.8%) |
Frame: 3 |
| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group] |
| Match: gi|108710089|gb|ABF97884.1| |
score: 837 |
e-value: 0 |
Identity: 93.42% |
Span: 1323bp (82.8%) |
Frame: 3 |
| DNA-directed RNA polymerase II 135 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1... |
| Match: gi|16488|emb|CAA79527.1| |
score: 835 |
e-value: 0 |
Identity: 94.04% |
Span: 1308bp (81.9%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Arabidopsis thaliana] |
| Match: gi|68300804|gb|AAY89344.1| |
score: 827 |
e-value: 0 |
Identity: 92.61% |
Span: 1299bp (81.3%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Petunia x hybrida] |
| Match: gi|242038711|ref|XP_002466750.1| |
score: 827 |
e-value: 0 |
Identity: 92.06% |
Span: 1323bp (82.8%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor] >gi241920604|gb|EER93748.1| hypothetical protein SORBIDRA... |
| Match: gi|68300799|gb|AAY89342.1| |
score: 819 |
e-value: 0 |
Identity: 92.58% |
Span: 1293bp (80.9%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Nicotiana sylvestris] |
| Match: gi|70794968|gb|AAZ08458.1| |
score: 812 |
e-value: 0 |
Identity: 91.2% |
Span: 1296bp (81.1%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Rhododendron macrophyllum] |
| Match: gi|68300802|gb|AAY89343.1| |
score: 811 |
e-value: 0 |
Identity: 88.69% |
Span: 1326bp (83.0%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Antirrhinum majus] |
| Match: gi|224077112|ref|XP_002305137.1| |
score: 809 |
e-value: 0 |
Identity: 93.85% |
Span: 1269bp (79.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222848101|gb|EEE85648.1| predicted protein [Populus trichocarpa] |
| Match: gi|168027816|ref|XP_001766425.1| |
score: 808 |
e-value: 0 |
Identity: 88.89% |
Span: 1323bp (82.8%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162682334|gb|EDQ68753.1| predicted protein [Physcomitrella... |
| Match: gi|68300807|gb|AAY89345.1| |
score: 801 |
e-value: 0 |
Identity: 89.38% |
Span: 1299bp (81.3%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Solanum lycopersicum] |
| Match: gi|40644720|emb|CAD92662.1| |
score: 768 |
e-value: 0 |
Identity: 95.43% |
Span: 1182bp (74.0%) |
Frame: 3 |
| RNA polymerase II [Solanum lycopersicum] |
| Match: gi|67810558|gb|AAY81998.1| |
score: 765 |
e-value: 0 |
Identity: 84.02% |
Span: 1314bp (82.2%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Spirogyra sp. UWCC FW670] |
| Match: gi|40644726|emb|CAD92665.1| |
score: 756 |
e-value: 0 |
Identity: 93.42% |
Span: 1185bp (74.2%) |
Frame: 3 |
| RNA polymerase II [Mimulus guttatus] |
| Match: gi|120407526|gb|AAY82000.2| |
score: 741 |
e-value: 0 |
Identity: 85.07% |
Span: 1266bp (79.2%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Coleochaete scutata] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At4G21710.1 |
score: 837 |
e-value: 0 |
Identity: 94.27% |
Span: 1308bp (81.9%) |
Frame: 3 |
| Symbols: EMB1989, RPB2, NRPB2 | NRPB2 (EMBRYO DEFECTIVE 1989); DNA binding | chr4:11535696-11542212 REVERSE |
| Match: At5G45140.1 |
score: 353 |
e-value: 1e-97 |
Identity: 43.06% |
Span: 1281bp (80.2%) |
Frame: 3 |
| Symbols: NRPC2 | NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase | chr5:18264643-18274... |
| Match: At3G23780.1 |
score: 353 |
e-value: 1e-97 |
Identity: 44.32% |
Span: 1269bp (79.4%) |
Frame: 3 |
| Symbols: DRD2, NRPD2, NRPD2a | NRPD2a (NUCLEAR RNA POLYMERASE D 2A); DNA binding / DNA-directed RNA polymerase | chr... |
| Match: At3G18090.1 |
score: 349 |
e-value: 3e-96 |
Identity: 44.22% |
Span: 1269bp (79.4%) |
Frame: 3 |
| Symbols: NRPD2b | NRPD2b (nuclear RNA polymerase D 2b); DNA binding / DNA-directed RNA polymerase | chr3:6195329-620... |
| Match: At1G29940.1 |
score: 247 |
e-value: 2e-65 |
Identity: 34.28% |
Span: 1269bp (79.4%) |
Frame: 3 |
| Symbols: NRPA2 | NRPA2 (nuclear RNA polymerase A 2); DNA-directed RNA polymerase | chr1:10479306-10486654 REVERSE |
| Match: AtCG00190.1 |
score: 154 |
e-value: 2e-37 |
Identity: 28.49% |
Span: 1035bp (64.8%) |
Frame: 3 |
| Symbols: RPOB | Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a... |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q42877 |
score: 847 |
e-value: 0 |
Identity: 93.67% |
Span: 1326bp (83.0%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum GN=RPB2 PE=2 SV=1 |
| Match: P38420 |
score: 837 |
e-value: 0 |
Identity: 94.27% |
Span: 1308bp (81.9%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2 |
| Match: Q54J75 |
score: 676 |
e-value: 0 |
Identity: 74.65% |
Span: 1290bp (80.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1 |
| Match: P08518 |
score: 637 |
e-value: 0 |
Identity: 71.4% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae GN=RPB2 PE=1 SV=2 |
| Match: Q753Q4 |
score: 636 |
e-value: 0 |
Identity: 70.7% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Ashbya gossypii GN=RPB2 PE=3 SV=1 |
| Match: Q6FLD5 |
score: 635 |
e-value: 0 |
Identity: 70.7% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Candida glabrata GN=RPB2 PE=3 SV=1 |
| Match: A5DHT2 |
score: 633 |
e-value: 0 |
Identity: 71% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Pichia guilliermondii GN=RPB2 PE=3 SV=3 |
| Match: Q02061 |
score: 625 |
e-value: 2e-178 |
Identity: 69.61% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe GN=rpb2 PE=1 SV=2 |
| Match: P30876 |
score: 615 |
e-value: 4e-175 |
Identity: 69.53% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens GN=POLR2B PE=1 SV=1 |
| Match: Q8CFI7 |
score: 613 |
e-value: 1e-174 |
Identity: 69.3% |
Span: 1287bp (80.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus GN=Polr2b PE=2 SV=2 |
| Match: P08266 |
score: 607 |
e-value: 6e-173 |
Identity: 68.53% |
Span: 1284bp (80.4%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila melanogaster GN=RpII140 PE=2 SV=2 |
| Match: Q10578 |
score: 600 |
e-value: 7e-171 |
Identity: 67.05% |
Span: 1290bp (80.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans GN=rpb-2 PE=2 SV=2 |
| Match: Q8SR75 |
score: 558 |
e-value: 5e-158 |
Identity: 63.93% |
Span: 1281bp (80.2%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1 |
| Match: O27124 |
score: 409 |
e-value: 4e-113 |
Identity: 47.69% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum GN=rpoB1 PE=3 SV=1 |
| Match: P31814 |
score: 407 |
e-value: 1e-112 |
Identity: 48.24% |
Span: 1281bp (80.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B OS=Thermococcus celer GN=rpoB PE=3 SV=1 |
| Match: P11513 |
score: 404 |
e-value: 1e-111 |
Identity: 49.42% |
Span: 1284bp (80.4%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B OS=Sulfolobus acidocaldarius GN=rpoB PE=3 SV=2 |
| Match: P09845 |
score: 402 |
e-value: 4e-111 |
Identity: 47.81% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB1 PE=3 SV=2 |
| Match: Q60181 |
score: 399 |
e-value: 2e-110 |
Identity: 47.07% |
Span: 1311bp (82.0%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Methanocaldococcus jannaschii GN=rpoB1 PE=3 SV=1 |
| Match: P41557 |
score: 391 |
e-value: 8e-108 |
Identity: 47.6% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB1 PE=3 SV=2 |
| Match: Q03587 |
score: 389 |
e-value: 2e-107 |
Identity: 45.89% |
Span: 1299bp (81.3%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B OS=Thermoplasma acidophilum GN=rpoB PE=3 SV=1 |
| Match: P15351 |
score: 387 |
e-value: 9e-107 |
Identity: 44.73% |
Span: 1281bp (80.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Halobacterium salinarium GN=rpoB1 PE=1 SV=3 |
| Match: O28392 |
score: 387 |
e-value: 2e-106 |
Identity: 46.53% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B' OS=Archaeoglobus fulgidus GN=rpoB1 PE=4 SV=1 |
| Match: Q7T6X7 |
score: 385 |
e-value: 6e-106 |
Identity: 47.67% |
Span: 1281bp (80.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit 2 OS=Acanthamoeba polyphaga mimivirus GN=RPO2 PE=1 SV=2 |
| Match: Q10233 |
score: 371 |
e-value: 9e-102 |
Identity: 45.5% |
Span: 1293bp (80.9%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1 |
| Match: P22276 |
score: 369 |
e-value: 3e-101 |
Identity: 45.41% |
Span: 1302bp (81.5%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2 |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
