| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|18420800|ref|NP_568447.1| |
score: 336.3 |
e-value: 7.5e-91 |
Identity: 66.93% |
Span: 738bp (49.3%) |
Frame: 1 |
| 30S ribosomal protein, putative [Arabidopsis thaliana] >gi13877771|gb|AAK43963.1|AF370148_1 unknown protein [Arabidop... |
| Match: gi|134034|sp|P19954|RR30_SPIOL |
score: 318.9 |
e-value: 1.2e-85 |
Identity: 72% |
Span: 660bp (44.1%) |
Frame: 1 |
| gi|134034|sp|P19954|RR30_SPIOL Plastid-specific 30S ribosomal protein 1, chloroplast precursor (CS-S5) (CS5) (S22) (R... |
| Match: gi|170131|gb|AAA34039.1| |
score: 318.9 |
e-value: 1.2e-85 |
Identity: 72% |
Span: 660bp (44.1%) |
Frame: 1 |
| ribosomal protein 30S subunit [Spinacia oleracea] |
| Match: gi|30102988|gb|AAP21401.1| |
score: 274.6 |
e-value: 2.7e-72 |
Identity: 60.87% |
Span: 678bp (45.3%) |
Frame: 1 |
| gi|30102988|gb|AAP21401.1| putative ribosomal protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|227070|prf||1613445A |
score: 212.2 |
e-value: 4.7e-64 |
Identity: 74.64% |
Span: 414bp (27.6%) |
Frame: 1 |
| ribosomal protein CS-S5 |
| Match: gi|17230676|ref|NP_487224.1| |
score: 155.2 |
e-value: 2.4e-36 |
Identity: 41.98% |
Span: 618bp (41.3%) |
Frame: 1 |
| gi|17230676|ref|NP_487224.1| light-repressed protein [Nostoc sp. PCC 7120] gi|25535366|pir||AI2203 light-repressed pr... |
| Match: gi|22298376|ref|NP_681623.1| |
score: 152.5 |
e-value: 1.5e-35 |
Identity: 41.67% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|22298376|ref|NP_681623.1| ORF_ID:tlr0833~light repressed protein A homolog [Thermosynechococcus elongatus BP-1] gi... |
| Match: gi|23125050|ref|ZP_00107001.1| |
score: 148.7 |
e-value: 2.2e-34 |
Identity: 41.06% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|23125050|ref|ZP_00107001.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Nostoc punctiforme] |
| Match: gi|23041481|ref|ZP_00072935.1| |
score: 146 |
e-value: 1.4e-33 |
Identity: 41.23% |
Span: 621bp (41.5%) |
Frame: 1 |
| gi|23041481|ref|ZP_00072935.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Trichodesmium erythraeum IMS101] |
| Match: gi|16331216|ref|NP_441944.1| |
score: 145.2 |
e-value: 2.5e-33 |
Identity: 40.49% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|16331216|ref|NP_441944.1| light repressed protein [Synechocystis sp. PCC 6803] gi|2500503|sp|P74518|LRTA_SYNY3 Lig... |
| Match: gi|33862486|ref|NP_894046.1| |
score: 142.1 |
e-value: 2.1e-32 |
Identity: 39.41% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|33862486|ref|NP_894046.1| light repressed protein A homolog [Prochlorococcus marinus str. MIT 9313] gi|33640599|em... |
| Match: gi|1346469|sp|P47908|LRTA_SYNP2 |
score: 139 |
e-value: 1.8e-31 |
Identity: 40.1% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|1346469|sp|P47908|LRTA_SYNP2 LIGHT REPRESSED PROTEIN A gi|625841|pir||A53914 light-repressed protein lrtA - Synech... |
| Match: gi|33865201|ref|NP_896760.1| |
score: 134.4 |
e-value: 4.3e-30 |
Identity: 38.73% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|33865201|ref|NP_896760.1| light repressed protein A homolog [Synechococcus sp. WH 8102] gi|33638885|emb|CAE07182.1... |
| Match: gi|37520355|ref|NP_923732.1| |
score: 132.9 |
e-value: 1.3e-29 |
Identity: 38.65% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|37520355|ref|NP_923732.1| light-repressed protein LrtA homolog [Gloeobacter violaceus] gi|35211348|dbj|BAC88727.1|... |
| Match: gi|33239849|ref|NP_874791.1| |
score: 132.1 |
e-value: 2.1e-29 |
Identity: 37.38% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|33239849|ref|NP_874791.1| Ribosome-associated protein Y [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|... |
| Match: gi|33860957|ref|NP_892518.1| |
score: 132.1 |
e-value: 2.1e-29 |
Identity: 36.67% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|33860957|ref|NP_892518.1| light repressed protein A homolog [Prochlorococcus marinus subsp. pastoris str. CCMP1378... |
| Match: gi|30023223|ref|NP_834854.1| |
score: 115.5 |
e-value: 2.1e-24 |
Identity: 38.05% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|30023223|ref|NP_834854.1| Probable Sigma (54) modulation protein / SSU ribosomal protein S30P [Bacillus cereus ATC... |
| Match: gi|21397652|ref|NP_653637.1| |
score: 112.8 |
e-value: 1.3e-23 |
Identity: 37.07% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|21397652|ref|NP_653637.1| Ribosomal_S30, Sigma 54 modulation protein / S30EA ribosomal protein [Bacillus anthracis... |
| Match: gi|15806102|ref|NP_294806.1| |
score: 107.8 |
e-value: 4.3e-22 |
Identity: 36.04% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|15806102|ref|NP_294806.1| light-repressed protein A, putative [Deinococcus radiodurans] gi|32699733|sp|Q9RVE7|UA82... |
| Match: gi|32307586|gb|AAP79198.1| |
score: 106.7 |
e-value: 9.7e-22 |
Identity: 38.1% |
Span: 471bp (31.4%) |
Frame: 1 |
| gi|32307586|gb|AAP79198.1| ribosomal protein rpS22 [Bigelowiella natans] |
| Match: gi|15616170|ref|NP_244475.1| |
score: 105.1 |
e-value: 2.8e-21 |
Identity: 32.84% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|15616170|ref|NP_244475.1| ribosomal protein S30AE family [Bacillus halodurans] gi|25494612|pir||H84100 ribosomal p... |
| Match: gi|15923742|ref|NP_371276.1| |
score: 104.4 |
e-value: 4.8e-21 |
Identity: 31.55% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|15923742|ref|NP_371276.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926429|re... |
| Match: gi|18311154|ref|NP_563088.1| |
score: 104 |
e-value: 6.3e-21 |
Identity: 33.98% |
Span: 609bp (40.7%) |
Frame: 1 |
| gi|18311154|ref|NP_563088.1| 30S ribosomal protein S30AE family [Clostridium perfringens] gi|18145837|dbj|BAB81878.1|... |
| Match: gi|22971664|ref|ZP_00018601.1| |
score: 102.8 |
e-value: 1.4e-20 |
Identity: 27.96% |
Span: 633bp (42.3%) |
Frame: 1 |
| gi|22971664|ref|ZP_00018601.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|16080584|ref|NP_391411.1| |
score: 102.4 |
e-value: 1.8e-20 |
Identity: 31.86% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|16080584|ref|NP_391411.1| alternate gene name: yviI~similar to ribosomal protein S30AE family [Bacillus subtilis] ... |
| Match: gi|28377598|ref|NP_784490.1| |
score: 102.4 |
e-value: 1.8e-20 |
Identity: 35.35% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|28377598|ref|NP_784490.1| ribosomal protein S30EA [Lactobacillus plantarum WCFS1] gi|28270431|emb|CAD63333.1| ribo... |
| Match: gi|23099953|ref|NP_693419.1| |
score: 102.4 |
e-value: 1.8e-20 |
Identity: 31.37% |
Span: 609bp (40.7%) |
Frame: 1 |
| gi|23099953|ref|NP_693419.1| hypothetical protein [Oceanobacillus iheyensis HTE831] gi|22778184|dbj|BAC14454.1| hypot... |
| Match: gi|22536521|ref|NP_687372.1| |
score: 100.9 |
e-value: 5.3e-20 |
Identity: 31.37% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|22536521|ref|NP_687372.1| ribosomal subunit interface protein [Streptococcus agalactiae 2603V/R] gi|25010400|ref|N... |
| Match: gi|12642652|gb|AAK00333.1| |
score: 100.5 |
e-value: 6.9e-20 |
Identity: 34.3% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|12642652|gb|AAK00333.1| YvyD [Lactobacillus delbrueckii] |
| Match: gi|15675492|ref|NP_269666.1| |
score: 100.5 |
e-value: 6.9e-20 |
Identity: 32.35% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|15675492|ref|NP_269666.1| conserved protein - function unknown [Streptococcus pyogenes] gi|19746540|ref|NP_607676.... |
| Match: gi|23020802|ref|ZP_00060497.1| |
score: 98.21 |
e-value: 3.4e-19 |
Identity: 33.84% |
Span: 594bp (39.7%) |
Frame: 1 |
| gi|23020802|ref|ZP_00060497.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Clostridium thermocellum ATCC 27405] |
| Match: gi|15672625|ref|NP_266799.1| |
score: 97.83 |
e-value: 4.5e-19 |
Identity: 30.35% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|15672625|ref|NP_266799.1| hypothetical protein [Lactococcus lactis subsp. lactis] gi|25401163|pir||C86705 hypothet... |
| Match: gi|28210085|ref|NP_781029.1| |
score: 97.06 |
e-value: 7.7e-19 |
Identity: 35.75% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|28210085|ref|NP_781029.1| SSU ribosomal protein S30P [Clostridium tetani E88] gi|28202521|gb|AAO34966.1| SSU ribos... |
| Match: gi|7800896|emb|CAB91549.1| |
score: 97.06 |
e-value: 7.7e-19 |
Identity: 30.35% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|7800896|emb|CAB91549.1| hypothetical protein [Lactococcus lactis] |
| Match: gi|15896102|ref|NP_349451.1| |
score: 96.67 |
e-value: 1e-18 |
Identity: 34.63% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|15896102|ref|NP_349451.1| Ribosome-associated protein Y (PSrp-1) [Clostridium acetobutylicum] gi|25498386|pir||D97... |
| Match: gi|27467452|ref|NP_764089.1| |
score: 96.67 |
e-value: 1e-18 |
Identity: 30.69% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|27467452|ref|NP_764089.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|27314995|gb|AA... |
| Match: gi|24378984|ref|NP_720939.1| |
score: 95.9 |
e-value: 1.7e-18 |
Identity: 30.88% |
Span: 612bp (40.9%) |
Frame: 1 |
| gi|24378984|ref|NP_720939.1| putative ribosome-associated protein [Streptococcus mutans UA159] gi|24376875|gb|AAN5824... |
| Match: gi|16801716|ref|NP_471984.1| |
score: 95.52 |
e-value: 2.2e-18 |
Identity: 32.34% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|16801716|ref|NP_471984.1| similar to conserved hypothetical proteins like to B. subtilis YvyD protein [Listeria in... |
| Match: gi|29376312|ref|NP_815466.1| |
score: 95.13 |
e-value: 2.9e-18 |
Identity: 32.49% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|29376312|ref|NP_815466.1| ribosomal subunit interface protein [Enterococcus faecalis V583] gi|29343775|gb|AAO81536... |
| Match: gi|15902013|ref|NP_346617.1| |
score: 94.74 |
e-value: 3.8e-18 |
Identity: 30.24% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|15902013|ref|NP_346617.1| ribosomal subunit interface protein [Streptococcus pneumoniae TIGR4] gi|15904052|ref|NP_... |
| Match: gi|23038244|ref|ZP_00070414.1| |
score: 94.36 |
e-value: 5e-18 |
Identity: 29.21% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|23038244|ref|ZP_00070414.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Oenococcus oeni MCW] |
| Match: gi|23003225|ref|ZP_00046892.1| |
score: 94.36 |
e-value: 5e-18 |
Identity: 28.91% |
Span: 633bp (42.3%) |
Frame: 1 |
| gi|23003225|ref|ZP_00046892.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Lactobacillus gasseri] |
| Match: gi|23056417|ref|ZP_00082440.1| |
score: 86.66 |
e-value: 1e-15 |
Identity: 32.14% |
Span: 588bp (39.3%) |
Frame: 1 |
| gi|23056417|ref|ZP_00082440.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Geobacter metallireducens] |
| Match: gi|23024404|ref|ZP_00063617.1| |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 26.13% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|23024404|ref|ZP_00063617.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Leuconostoc mesenteroides subsp. mese... |
| Match: gi|38233305|ref|NP_939072.1| |
score: 85.89 |
e-value: 1.8e-15 |
Identity: 31.51% |
Span: 621bp (41.5%) |
Frame: 1 |
| gi|38233305|ref|NP_939072.1| Conserved hypothetical protein [Corynebacterium diphtheriae] gi|38199564|emb|CAE49215.1|... |
| Match: gi|19551984|ref|NP_599986.1| |
score: 80.49 |
e-value: 7.4e-14 |
Identity: 31.31% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|19551984|ref|NP_599986.1| ribosome-associated protein Y [Corynebacterium glutamicum ATCC 13032] gi|21323525|dbj|BA... |
| Match: gi|25027329|ref|NP_737383.1| |
score: 78.95 |
e-value: 2.2e-13 |
Identity: 31.28% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|25027329|ref|NP_737383.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492610|dbj|BAC175... |
| Match: gi|19703796|ref|NP_603358.1| |
score: 78.95 |
e-value: 2.2e-13 |
Identity: 28.36% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|19703796|ref|NP_603358.1| Probable sigma(54) modulation protein; SSU ribosomal protein S30P [Fusobacterium nucleat... |
| Match: gi|34763431|ref|ZP_00144379.1| |
score: 78.18 |
e-value: 3.7e-13 |
Identity: 28.36% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|34763431|ref|ZP_00144379.1| PROBABLE SIGMA(54) MODULATION PROTEIN; SSU ribosomal protein S30P [Fusobacterium nucle... |
| Match: gi|22990480|ref|ZP_00035329.1| |
score: 76.26 |
e-value: 1.4e-12 |
Identity: 33.78% |
Span: 444bp (29.6%) |
Frame: 1 |
| gi|22990480|ref|ZP_00035329.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Enterococcus faecium] |
| Match: gi|20807017|ref|NP_622188.1| |
score: 75.1 |
e-value: 3.1e-12 |
Identity: 31.25% |
Span: 618bp (41.3%) |
Frame: 1 |
| gi|20807017|ref|NP_622188.1| Ribosome-associated protein Y (PSrp-1) [Thermoanaerobacter tengcongensis] gi|20515502|gb... |
| Match: gi|15842830|ref|NP_337867.1| |
score: 74.71 |
e-value: 4.1e-12 |
Identity: 27.62% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|15842830|ref|NP_337867.1| S30AE family protein [Mycobacterium tuberculosis CDC1551] gi|13883159|gb|AAK47681.1| S30... |
| Match: gi|15610377|ref|NP_217758.1| |
score: 74.71 |
e-value: 4.1e-12 |
Identity: 27.62% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|15610377|ref|NP_217758.1| hypothetical protein Rv3241c [Mycobacterium tuberculosis H37Rv] gi|31794421|ref|NP_85691... |
| Match: gi|29831610|ref|NP_826244.1| |
score: 73.94 |
e-value: 6.9e-12 |
Identity: 29.09% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|29831610|ref|NP_826244.1| hypothetical protein [Streptomyces avermitilis MA-4680] gi|29608726|dbj|BAC72779.1| hypo... |
| Match: gi|23475285|ref|ZP_00130573.1| |
score: 73.56 |
e-value: 9.1e-12 |
Identity: 28.14% |
Span: 588bp (39.3%) |
Frame: 1 |
| gi|23475285|ref|ZP_00130573.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Desulfovibrio desulfuricans G20] |
| Match: gi|23044892|ref|ZP_00075437.1| |
score: 73.17 |
e-value: 1.2e-11 |
Identity: 39.64% |
Span: 324bp (21.6%) |
Frame: 1 |
| gi|23044892|ref|ZP_00075437.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Trichodesmium erythraeum IMS101] |
| Match: gi|21221452|ref|NP_627231.1| |
score: 72.79 |
e-value: 1.5e-11 |
Identity: 29.22% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|21221452|ref|NP_627231.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|7799204|emb|CAB90920.1... |
| Match: gi|216333|dbj|BAA01121.1| |
score: 72.02 |
e-value: 2.6e-11 |
Identity: 32.31% |
Span: 381bp (25.4%) |
Frame: 1 |
| gi|216333|dbj|BAA01121.1| ORF1 [Bacillus subtilis] |
| Match: gi|1353164|sp|P47995|YSEA_STACA |
score: 71.63 |
e-value: 3.4e-11 |
Identity: 34.09% |
Span: 396bp (26.4%) |
Frame: 1 |
| gi|1353164|sp|P47995|YSEA_STACA Hypothetical protein in SECA 5'region (ORF1) |
| Match: gi|22960416|ref|ZP_00008057.1| |
score: 70.09 |
e-value: 1e-10 |
Identity: 24.5% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|22960416|ref|ZP_00008057.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Rhodobacter sphaeroides] |
| Match: gi|15644355|ref|NP_229407.1| |
score: 69.71 |
e-value: 1.3e-10 |
Identity: 28.28% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|15644355|ref|NP_229407.1| conserved hypothetical protein [Thermotoga maritima] gi|7462161|pir||C72235 conserved hy... |
| Match: gi|23465978|ref|NP_696581.1| |
score: 68.94 |
e-value: 2.2e-10 |
Identity: 25.7% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|23465978|ref|NP_696581.1| hypothetical protein in sigma 54 modulation protein / S30ea ribosomal protein family [Bi... |
| Match: gi|15827339|ref|NP_301602.1| |
score: 68.55 |
e-value: 2.9e-10 |
Identity: 25.24% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|15827339|ref|NP_301602.1| conserved hypothetical protein [Mycobacterium leprae] gi|25398099|pir||C87006 conserved ... |
| Match: gi|23109860|ref|ZP_00096028.1| |
score: 68.17 |
e-value: 3.8e-10 |
Identity: 26.73% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|23109860|ref|ZP_00096028.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Novosphingobium aromaticivorans] |
| Match: gi|23018811|ref|ZP_00058525.1| |
score: 68.17 |
e-value: 3.8e-10 |
Identity: 28.57% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|23018811|ref|ZP_00058525.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Thermobifida fusca] |
| Match: gi|628926|pir||S47148 |
score: 63.54 |
e-value: 9.4e-09 |
Identity: 33.33% |
Span: 369bp (24.6%) |
Frame: 1 |
| gi|628926|pir||S47148 hypothetical protein 1 - Staphylococcus carnosus gi|499334|emb|CAA56161.1| orf1 [Staphylococcus... |
| Match: gi|21328699|gb|AAM48705.1| |
score: 61.62 |
e-value: 3.6e-08 |
Identity: 23.12% |
Span: 597bp (39.9%) |
Frame: 1 |
| gi|21328699|gb|AAM48705.1| ribosomal subunit interface protein, putative [uncultured proteobacterium] |
| Match: gi|15892557|ref|NP_360271.1| |
score: 60.08 |
e-value: 1e-07 |
Identity: 23.2% |
Span: 576bp (38.5%) |
Frame: 1 |
| gi|15892557|ref|NP_360271.1| probable sigma(54) modulation protein [Rickettsia conorii] gi|25365048|pir||B97779 proba... |
| Match: gi|34580453|ref|ZP_00141933.1| |
score: 59.31 |
e-value: 1.8e-07 |
Identity: 23.2% |
Span: 576bp (38.5%) |
Frame: 1 |
| gi|34580453|ref|ZP_00141933.1| probable sigma(54) modulation protein [Rickettsia sibirica] gi|28261838|gb|EAA25342.1|... |
| Match: gi|27375835|ref|NP_767364.1| |
score: 57.77 |
e-value: 5.2e-07 |
Identity: 22.64% |
Span: 618bp (41.3%) |
Frame: 1 |
| gi|27375835|ref|NP_767364.1| sigma-54 modulation protein [Bradyrhizobium japonicum] gi|267559|sp|P30334|RP5M_BRAJA Pr... |
| Match: gi|15606722|ref|NP_214102.1| |
score: 57.38 |
e-value: 6.7e-07 |
Identity: 25.85% |
Span: 606bp (40.5%) |
Frame: 1 |
| gi|15606722|ref|NP_214102.1| putative protein [Aquifex aeolicus] gi|7517466|pir||G70438 hypothetical protein aq_1603 ... |
| Match: gi|227070|prf||1613445A |
score: 57 |
e-value: 4.7e-64 |
Identity: 50.62% |
Span: 243bp (16.2%) |
Frame: 2 |
| ribosomal protein CS-S5 |
| Match: gi|17988070|ref|NP_540704.1| |
score: 57 |
e-value: 8.8e-07 |
Identity: 22.55% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|17988070|ref|NP_540704.1| putative sigma54 modulation protein / SSU ribosomal protein S30P [Brucella melitensis] g... |
| Match: gi|23501071|ref|NP_697198.1| |
score: 56.22 |
e-value: 1.5e-06 |
Identity: 22.55% |
Span: 603bp (40.3%) |
Frame: 1 |
| gi|23501071|ref|NP_697198.1| ribosomal subunit interface protein [Brucella suis 1330] gi|23346939|gb|AAN29113.1| ribo... |
| Match: gi|13472787|ref|NP_104354.1| |
score: 52.76 |
e-value: 1.7e-05 |
Identity: 22.17% |
Span: 609bp (40.7%) |
Frame: 1 |
| gi|13472787|ref|NP_104354.1| sigma-54 modulation protein [Mesorhizobium loti] gi|14023534|dbj|BAB50140.1| sigma-54 mo... |
| Match: gi|15964133|ref|NP_384486.1| |
score: 51.6 |
e-value: 3.7e-05 |
Identity: 24.87% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|15964133|ref|NP_384486.1| PROBABLE SIGMA54 MODULATION PROTEIN [Sinorhizobium meliloti] gi|7404460|sp|P17265|RP5M_R... |
| Match: gi|15887682|ref|NP_353363.1| |
score: 51.22 |
e-value: 4.8e-05 |
Identity: 24.26% |
Span: 606bp (40.5%) |
Frame: 1 |
| gi|15887682|ref|NP_353363.1| AGR_C_579p [Agrobacterium tumefaciens] gi|25365055|pir||C97399 probable sigma 54 modulat... |
| Match: gi|22962049|ref|ZP_00009655.1| |
score: 50.06 |
e-value: 0.00011 |
Identity: 22.49% |
Span: 615bp (41.1%) |
Frame: 1 |
| gi|22962049|ref|ZP_00009655.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Rhodopseudomonas palustris] |
| Match: gi|17934247|ref|NP_531037.1| |
score: 50.06 |
e-value: 0.00011 |
Identity: 24.37% |
Span: 591bp (39.5%) |
Frame: 1 |
| gi|17934247|ref|NP_531037.1| sigma-54 modulation protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gi|2536... |
| Match: gi|28899445|ref|NP_799050.1| |
score: 48.91 |
e-value: 0.00024 |
Identity: 31% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|28899445|ref|NP_799050.1| putative sigma-54 modulation protein [Vibrio parahaemolyticus RIMD 2210633] gi|28807681|... |
| Match: gi|30248092|ref|NP_840162.1| |
score: 48.14 |
e-value: 0.00041 |
Identity: 30% |
Span: 330bp (22.0%) |
Frame: 1 |
| gi|30248092|ref|NP_840162.1| Sigma 54 modulation protein / S30EA ribosomal protein [Nitrosomonas europaea ATCC 19718]... |
| Match: gi|15618497|ref|NP_224783.1| |
score: 47.37 |
e-value: 0.0007 |
Identity: 29.03% |
Span: 336bp (22.4%) |
Frame: 1 |
| gi|15618497|ref|NP_224783.1| conserved hypothetical protein [Chlamydophila pneumoniae CWL029] gi|15836119|ref|NP_3006... |
| Match: gi|23103596|ref|ZP_00090074.1| |
score: 47.37 |
e-value: 0.0007 |
Identity: 29.25% |
Span: 318bp (21.2%) |
Frame: 1 |
| gi|23103596|ref|ZP_00090074.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Azotobacter vinelandii] |
| Match: gi|133303|sp|P17160|RP5M_AZOVI |
score: 46.21 |
e-value: 0.002 |
Identity: 28.7% |
Span: 324bp (21.6%) |
Frame: 1 |
| gi|133303|sp|P17160|RP5M_AZOVI PROBABLE SIGMA(54) MODULATION PROTEIN (ORF107) gi|77859|pir||S07663 hypothetical prote... |
| Match: gi|16127827|ref|NP_422391.1| |
score: 45.82 |
e-value: 0.002 |
Identity: 21.36% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|16127827|ref|NP_422391.1| ribosomal subunit interface protein [Caulobacter crescentus CB15] gi|25365054|pir||C8769... |
| Match: gi|33598535|ref|NP_886178.1| |
score: 45.82 |
e-value: 0.002 |
Identity: 29% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|33598535|ref|NP_886178.1| probable sigma(54) modulation protein [Bordetella parapertussis] gi|33603480|ref|NP_8910... |
| Match: gi|34558446|ref|NP_908261.1| |
score: 45.82 |
e-value: 0.002 |
Identity: 20.79% |
Span: 600bp (40.1%) |
Frame: 1 |
| gi|34558446|ref|NP_908261.1| hypothetical protein WS2170 [Wolinella succinogenes] gi|34484165|emb|CAE11161.1| hypothe... |
| Match: gi|37525233|ref|NP_928577.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 28% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|37525233|ref|NP_928577.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784660|emb|CA... |
| Match: gi|3341485|emb|CAA11113.1| |
score: 45.44 |
e-value: 0.003 |
Identity: 30.3% |
Span: 297bp (19.8%) |
Frame: 1 |
| gi|3341485|emb|CAA11113.1| hypothetical protein [Pseudomonas stutzeri] |
| Match: gi|37678631|ref|NP_933240.1| |
score: 44.67 |
e-value: 0.005 |
Identity: 29% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|37678631|ref|NP_933240.1| putative sigma-54 modulation protein [Vibrio vulnificus YJ016] gi|37197371|dbj|BAC93211.... |
| Match: gi|27364150|ref|NP_759678.1| |
score: 44.28 |
e-value: 0.006 |
Identity: 29% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|27364150|ref|NP_759678.1| Ribosome-associated protein Y [Vibrio vulnificus CMCP6] gi|27360268|gb|AAO09205.1| Ribos... |
| Match: gi|2342481|dbj|BAA21884.1| |
score: 43.9 |
e-value: 0.008 |
Identity: 30% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|2342481|dbj|BAA21884.1| unnamed protein product [Vibrio alginolyticus] |
| Match: gi|28198544|ref|NP_778858.1| |
score: 43.51 |
e-value: 0.01 |
Identity: 29.9% |
Span: 291bp (19.4%) |
Frame: 1 |
| gi|28198544|ref|NP_778858.1| sigma-54 modulation protein [Xylella fastidiosa Temecula1] gi|28056628|gb|AAO28507.1| si... |
| Match: gi|22138780|emb|CAD43113.1| |
score: 43.51 |
e-value: 0.01 |
Identity: 28.28% |
Span: 297bp (19.8%) |
Frame: 1 |
| gi|22138780|emb|CAD43113.1| hypothetical protein [Pseudomonas stutzeri] |
| Match: gi|15838008|ref|NP_298696.1| |
score: 43.51 |
e-value: 0.01 |
Identity: 29.9% |
Span: 291bp (19.4%) |
Frame: 1 |
| gi|15838008|ref|NP_298696.1| sigma-54 modulation protein [Xylella fastidiosa 9a5c] gi|11362668|pir||D82683 sigma-54 m... |
| Match: gi|15642525|ref|NP_232158.1| |
score: 43.51 |
e-value: 0.01 |
Identity: 29% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|15642525|ref|NP_232158.1| sigma-54 modulation protein, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|1... |
| Match: gi|23117062|ref|ZP_00101302.1| |
score: 43.13 |
e-value: 0.013 |
Identity: 27.2% |
Span: 366bp (24.4%) |
Frame: 1 |
| gi|23117062|ref|ZP_00101302.1| COG1544: Ribosome-associated protein Y (PSrp-1) [Desulfitobacterium hafniense] |
| Match: gi|33359229|gb|AAQ17036.1| |
score: 42.74 |
e-value: 0.017 |
Identity: 26.61% |
Span: 327bp (21.8%) |
Frame: 1 |
| gi|33359229|gb|AAQ17036.1| putative sigma-54 modulation protein [Pseudomonas fluorescens] |
| Match: gi|21232234|ref|NP_638151.1| |
score: 42.36 |
e-value: 0.022 |
Identity: 31.91% |
Span: 282bp (18.8%) |
Frame: 1 |
| gi|21232234|ref|NP_638151.1| sigma-54 modulation protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|2... |
| Match: gi|8118095|gb|AAF72888.1| |
score: 42.36 |
e-value: 0.022 |
Identity: 28% |
Span: 300bp (20.0%) |
Frame: 1 |
| gi|8118095|gb|AAF72888.1| putative sigma-54 modulation protein [Vibrio harveyi] |
|
| 16 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5g24490.1 |
score: 336.3 |
e-value: 2.4e-92 |
Identity: 66.93% |
Span: 738bp (49.3%) |
Frame: 1 |
| At5g24490.1 68412.m02641 expressed protein contains similarity to ribosomal protein 30S subunit |
|
