| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|142942402|gb|ABO92977.1| |
score: 864 |
e-value: 0 |
Identity: 98.35% |
Span: 1269bp (85.5%) |
Frame: 1 |
| putative RNA-dependent RNA-polymerase [Solanum tuberosum] |
| Match: gi|113205271|gb|AAT38699.2| |
score: 864 |
e-value: 0 |
Identity: 98.35% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA dependent RNA polymerase family protein [Solanum demissum] |
| Match: gi|113205254|gb|ABI34311.1| |
score: 859 |
e-value: 0 |
Identity: 97.64% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA dependent RNA polymerase family protein [Solanum demissum] |
| Match: gi|113205257|gb|AAT38687.2| |
score: 847 |
e-value: 0 |
Identity: 91.45% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA-directed RNA polymerase, putative [Solanum demissum] |
| Match: gi|4038592|emb|CAA71421.1| |
score: 834 |
e-value: 0 |
Identity: 95.27% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA-directed RNA polymerase [Solanum lycopersicum] |
| Match: gi|113205326|gb|AAT38754.2| |
score: 832 |
e-value: 0 |
Identity: 86.28% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA-directed RNA polymerase, putative [Solanum demissum] |
| Match: gi|113205194|gb|AAT39936.2| |
score: 815 |
e-value: 0 |
Identity: 93.38% |
Span: 1269bp (85.5%) |
Frame: 1 |
| RNA-directed RNA polymerase-like, putative [Solanum demissum] |
| Match: gi|142942515|gb|ABO93006.1| |
score: 773 |
e-value: 0 |
Identity: 98.66% |
Span: 1122bp (75.6%) |
Frame: 1 |
| putative RNA-dependent RNA-polymerase [Solanum tuberosum] |
| Match: gi|157152684|gb|ABV24845.1| |
score: 762 |
e-value: 0 |
Identity: 86.73% |
Span: 1266bp (85.3%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Nicotiana glutinosa] >gi209420668|gb|ACI46982.1| RNA-dependent RNA polymerase [Nicotian... |
| Match: gi|4138282|emb|CAA09697.1| |
score: 759 |
e-value: 0 |
Identity: 86.49% |
Span: 1266bp (85.3%) |
Frame: 1 |
| RNA-directed RNA polymerase [Nicotiana tabacum] |
| Match: gi|4138343|emb|CAA09896.1| |
score: 722 |
e-value: 0 |
Identity: 87.47% |
Span: 1173bp (79.0%) |
Frame: 1 |
| RNA-directed RNA polymerase [Petunia x hybrida] |
| Match: gi|113205403|gb|ABI34378.1| |
score: 642 |
e-value: 0 |
Identity: 84.29% |
Span: 1071bp (72.2%) |
Frame: 1 |
| RNA-directed RNA polymerase, putative [Solanum tuberosum] |
| Match: gi|225424397|ref|XP_002284914.1| |
score: 627 |
e-value: 1e-177 |
Identity: 71.19% |
Span: 1266bp (85.3%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147853646|emb|CAN82339.1| |
score: 608 |
e-value: 4e-172 |
Identity: 69.56% |
Span: 1266bp (85.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147860348|emb|CAN82568.1| |
score: 603 |
e-value: 1e-170 |
Identity: 68.54% |
Span: 1251bp (84.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|224099571|ref|XP_002311536.1| |
score: 602 |
e-value: 3e-170 |
Identity: 67.76% |
Span: 1266bp (85.3%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222851356|gb|EEE88903.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|225424395|ref|XP_002281315.1| |
score: 599 |
e-value: 3e-169 |
Identity: 69.78% |
Span: 1236bp (83.3%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|146762448|gb|ABQ45352.1| |
score: 595 |
e-value: 3e-168 |
Identity: 66.98% |
Span: 1266bp (85.3%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|90823307|gb|ABE01124.1| |
score: 587 |
e-value: 1e-165 |
Identity: 67.39% |
Span: 1236bp (83.3%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|224099569|ref|XP_002311535.1| |
score: 575 |
e-value: 4e-162 |
Identity: 67% |
Span: 1206bp (81.3%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222851355|gb|EEE88902.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|270239587|emb|CBI26820.1| |
score: 570 |
e-value: 2e-160 |
Identity: 72.06% |
Span: 1134bp (76.4%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224111420|ref|XP_002315849.1| |
score: 557 |
e-value: 1e-156 |
Identity: 64.18% |
Span: 1194bp (80.5%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222864889|gb|EEF02020.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|15223906|ref|NP_172932.1| |
score: 551 |
e-value: 1e-154 |
Identity: 67.84% |
Span: 1194bp (80.5%) |
Frame: 1 |
| RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding [Arabidopsis thaliana] >gi87... |
| Match: gi|113205325|gb|AAT38751.2| |
score: 549 |
e-value: 3e-154 |
Identity: 97.83% |
Span: 828bp (55.8%) |
Frame: 1 |
| RNA-directed RNA polymerase, putative [Solanum demissum] |
| Match: gi|113205403|gb|ABI34378.1| |
score: 207 |
e-value: 2e-51 |
Identity: 97.98% |
Span: 297bp (20.0%) |
Frame: 1 |
| RNA-directed RNA polymerase, putative [Solanum tuberosum] |
|
| 228 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At1G14790.1 |
score: 551 |
e-value: 5e-157 |
Identity: 67.84% |
Span: 1194bp (80.5%) |
Frame: 1 |
| Symbols: ATRDRP1, RDR1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | ... |
| Match: At4G11130.1 |
score: 339 |
e-value: 2e-93 |
Identity: 45.3% |
Span: 1218bp (82.1%) |
Frame: 1 |
| Symbols: RDR2 | RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase | chr4:6780518-6784386 FORWARD |
| Match: At3G49500.1 |
score: 313 |
e-value: 2e-85 |
Identity: 42.92% |
Span: 1191bp (80.3%) |
Frame: 1 |
| Symbols: SGS2, SDE1, RDR6 | RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding | chr3:18360178-18364190 REV... |
| Match: At2G19930.1 |
score: 87.4 |
e-value: 2e-17 |
Identity: 29.73% |
Span: 594bp (40.0%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8614615-8619523 REVERSE |
| Match: At2G19910.1 |
score: 83.6 |
e-value: 3e-16 |
Identity: 26.83% |
Span: 738bp (49.7%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8602902-8607839 REVERSE |
| Match: At2G19920.1 |
score: 73.6 |
e-value: 3e-13 |
Identity: 26.89% |
Span: 558bp (37.6%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8609304-8613969 REVERSE |
|
| swissprot [blastx] | Showing best 6 hits recorded |
| Match: Q0DXS3 |
score: 526 |
e-value: 2e-148 |
Identity: 63.75% |
Span: 1212bp (81.7%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2 |
| Match: Q7XM31 |
score: 345 |
e-value: 6e-94 |
Identity: 44.31% |
Span: 1212bp (81.7%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1 |
| Match: Q8LHH9 |
score: 315 |
e-value: 4e-85 |
Identity: 42.89% |
Span: 1191bp (80.3%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1 |
| Match: O14227 |
score: 185 |
e-value: 8e-46 |
Identity: 30.63% |
Span: 1206bp (81.3%) |
Frame: 1 |
| RNA-dependent RNA polymerase 1 OS=Schizosaccharomyces pombe GN=rdr1 PE=1 SV=1 |
| Match: Q5QMN4 |
score: 94.4 |
e-value: 2e-18 |
Identity: 31.05% |
Span: 591bp (39.8%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa subsp. japonica GN=RDR4 PE=2 SV=2 |
| Match: Q5QMN5 |
score: 82.4 |
e-value: 8e-15 |
Identity: 29.91% |
Span: 567bp (38.2%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 3 OS=Oryza sativa subsp. japonica GN=RDR3 PE=2 SV=2 |
|
