| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15231368|ref|NP_190207.1| |
score: 387.1 |
e-value: 4e-106 |
Identity: 78.45% |
Span: 696bp (47.4%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi79314404|ref|NP_001030817.1| 3' exori... |
| Match: gi|29126348|gb|AAO66540.1| |
score: 280 |
e-value: 7.6e-74 |
Identity: 68.29% |
Span: 615bp (41.9%) |
Frame: 1 |
| gi|29126348|gb|AAO66540.1| putative exosome component [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14043511|gb|AAH07742.1| |
score: 149.8 |
e-value: 1.2e-34 |
Identity: 36.53% |
Span: 657bp (44.7%) |
Frame: 1 |
| Exosome component 5 [Homo sapiens] >gi78394993|gb|AAI07697.1| Exosome component 5 [Homo sapiens] >gi|119577442|gb|EAW... |
| Match: gi|47174864|ref|NP_064543.3| |
score: 149.8 |
e-value: 1.2e-34 |
Identity: 36.53% |
Span: 657bp (44.7%) |
Frame: 1 |
| exosome complex exonuclease RRP46 [Homo sapiens] >gi14285757|sp|Q9NQT4.1|EXOS5_HUMAN RecName: Full=Exosome complex ex... |
| Match: gi|21693160|gb|AAM75154.1| |
score: 149.8 |
e-value: 1.2e-34 |
Identity: 36.53% |
Span: 657bp (44.7%) |
Frame: 1 |
| chronic myelogenous leukemia tumor antigen 28 [Homo sapiens] |
| Match: gi|20070392|ref|NP_613052.1| |
score: 147.9 |
e-value: 4.5e-34 |
Identity: 36.07% |
Span: 657bp (44.7%) |
Frame: 1 |
| gi|20070392|ref|NP_613052.1| DNA segment, Chr 7, Wayne State University 180, expressed [Mus musculus] gi|21759413|sp|... |
| Match: gi|21706518|gb|AAH34358.1| |
score: 147.9 |
e-value: 4.5e-34 |
Identity: 36.07% |
Span: 657bp (44.7%) |
Frame: 1 |
| gi|21706518|gb|AAH34358.1| DNA segment, Chr 7, Wayne State University 180, expressed [Mus musculus] |
| Match: gi|27676672|ref|XP_218343.1| |
score: 135.2 |
e-value: 3e-30 |
Identity: 34.7% |
Span: 657bp (44.7%) |
Frame: 1 |
| gi|27676672|ref|XP_218343.1| similar to DNA segment, Chr 7, Wayne State University 180, expressed [Rattus norvegicus] |
| Match: gi|31198127|ref|XP_308011.1| |
score: 102.1 |
e-value: 2.8e-20 |
Identity: 28.84% |
Span: 645bp (43.9%) |
Frame: 1 |
| gi|31198127|ref|XP_308011.1| ENSANGP00000019439 [Anopheles gambiae] gi|21291621|gb|EAA03766.1| ENSANGP00000019439 [An... |
| Match: gi|15225666|ref|NP_178726.1| |
score: 94.36 |
e-value: 5.9e-18 |
Identity: 50.91% |
Span: 276bp (18.8%) |
Frame: 1 |
| gi|15225666|ref|NP_178726.1| hypothetical protein [Arabidopsis thaliana] gi|25411271|pir||D84482 hypothetical protein... |
| Match: gi|16183595|gb|AAL13710.1| |
score: 93.97 |
e-value: 7.8e-18 |
Identity: 26.18% |
Span: 693bp (47.2%) |
Frame: 1 |
| gi|16183595|gb|AAL13710.1| GM01970p [Drosophila melanogaster] |
| Match: gi|31240059|ref|XP_320443.1| |
score: 92.43 |
e-value: 2.3e-17 |
Identity: 34.55% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|31240059|ref|XP_320443.1| ENSANGP00000017010 [Anopheles gambiae] gi|31240071|ref|XP_320449.1| ENSANGP00000009222 [... |
| Match: gi|24645688|ref|NP_650001.2| |
score: 91.28 |
e-value: 5e-17 |
Identity: 25.75% |
Span: 693bp (47.2%) |
Frame: 1 |
| gi|24645688|ref|NP_650001.2| CG4043-PA [Drosophila melanogaster] gi|23170911|gb|AAF54530.3| CG4043-PA [Drosophila mel... |
| Match: gi|24584046|ref|NP_609618.2| |
score: 88.58 |
e-value: 3.3e-16 |
Identity: 34.57% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster] gi|7298022|gb|AAF53263.1| CG15481-PA [Drosophila me... |
| Match: gi|17946442|gb|AAL49254.1| |
score: 88.58 |
e-value: 3.3e-16 |
Identity: 34.57% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|17946442|gb|AAL49254.1| RE67757p [Drosophila melanogaster] |
| Match: gi|46226980|gb|EAK87946.1| |
score: 86.27 |
e-value: 1.6e-15 |
Identity: 26.7% |
Span: 597bp (40.6%) |
Frame: 1 |
| gi|46226980|gb|EAK87946.1| RPR46-like RNAse PH domain [Cryptosporidium parvum] |
| Match: gi|15233167|ref|NP_191721.1| |
score: 84.73 |
e-value: 4.7e-15 |
Identity: 29.95% |
Span: 531bp (36.1%) |
Frame: 1 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|14591333|ref|NP_143411.1| |
score: 82.8 |
e-value: 1.8e-14 |
Identity: 31.98% |
Span: 489bp (33.3%) |
Frame: 1 |
| gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyrococcus horikoshii] gi|29336584|sp|O59223|ECX1_PYRHO Pro... |
| Match: gi|14520826|ref|NP_126301.1| |
score: 81.65 |
e-value: 4e-14 |
Identity: 31.98% |
Span: 489bp (33.3%) |
Frame: 1 |
| gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi] gi|29337010|sp|Q9V119|ECX1_PYRAB Probable exosome co... |
| Match: gi|33411774|emb|CAD58792.1| |
score: 80.88 |
e-value: 6.8e-14 |
Identity: 31.74% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease RRP41 [Bos taurus] |
| Match: gi|34866849|ref|XP_216949.2| |
score: 80.88 |
e-value: 6.8e-14 |
Identity: 31.74% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|34866849|ref|XP_216949.2| similar to putative exosome complex exonuclease RRP41 [Rattus norvegicus] |
| Match: gi|9506689|ref|NP_061910.1| |
score: 80.88 |
e-value: 6.8e-14 |
Identity: 31.74% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|9506689|ref|NP_061910.1| exosome complex exonuclease RRP41; exosome component Rrp41; ribosomal RNA-processing prot... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 80.88 |
e-value: 6.8e-14 |
Identity: 31.74% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|18977940|ref|NP_579297.1| |
score: 80.49 |
e-value: 8.9e-14 |
Identity: 31.4% |
Span: 489bp (33.3%) |
Frame: 1 |
| gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosus DSM 3638] gi|29336822|sp|Q8U0L9|ECX1_PYRFU Probable... |
| Match: gi|13541138|ref|NP_110826.1| |
score: 80.49 |
e-value: 8.9e-14 |
Identity: 27% |
Span: 681bp (46.4%) |
Frame: 1 |
| gi|13541138|ref|NP_110826.1| RNase PH [Thermoplasma volcanium] gi|29336899|sp|Q97BZ5|ECX1_THEVO Probable exosome comp... |
| Match: gi|11498104|ref|NP_069329.1| |
score: 78.95 |
e-value: 2.6e-13 |
Identity: 29.05% |
Span: 498bp (33.9%) |
Frame: 1 |
| gi|11498104|ref|NP_069329.1| ribonuclease PH (rph) [Archaeoglobus fulgidus DSM 4304] gi|29336576|sp|O29757|ECX1_ARCFU... |
| Match: gi|16082286|ref|NP_394747.1| |
score: 78.95 |
e-value: 2.6e-13 |
Identity: 24.89% |
Span: 681bp (46.4%) |
Frame: 1 |
| gi|16082286|ref|NP_394747.1| RNase PH (yeast SIK6) related protein [Thermoplasma acidophilum] gi|29336949|sp|Q9HIP2|E... |
| Match: gi|33944337|ref|XP_340316.1| |
score: 78.57 |
e-value: 3.4e-13 |
Identity: 32.04% |
Span: 474bp (32.3%) |
Frame: 1 |
| gi|33944337|ref|XP_340316.1| ribosomal RNA processing protein RRP41B [Trypanosoma brucei] gi|14250914|emb|CAC39262.1|... |
| Match: gi|46444644|gb|EAL03917.1| |
score: 77.41 |
e-value: 7.5e-13 |
Identity: 31.49% |
Span: 510bp (34.7%) |
Frame: 1 |
| gi|46444644|gb|EAL03917.1| hypothetical protein CaO19.4582 [Candida albicans SC5314] >gi|46444799|gb|EAL04071.1| hypo... |
| Match: gi|46142152|ref|ZP_00204178.1| |
score: 77.03 |
e-value: 9.8e-13 |
Identity: 31.33% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|46142152|ref|ZP_00204178.1| COG0689: RNase PH [Methanococcoides burtonii DSM 6242] |
| Match: gi|18313178|ref|NP_559845.1| |
score: 77.03 |
e-value: 9.8e-13 |
Identity: 29.94% |
Span: 471bp (32.1%) |
Frame: 1 |
| gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum] gi|29336868|sp|Q8ZVM9|ECX1_PY... |
| Match: gi|15678710|ref|NP_275826.1| |
score: 76.64 |
e-value: 1.3e-12 |
Identity: 30.64% |
Span: 489bp (33.3%) |
Frame: 1 |
| gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacter thermautotrophicus] gi|29336573|sp|O26779|ECX1_METT... |
| Match: gi|17538326|ref|NP_502520.1| |
score: 76.64 |
e-value: 1.3e-12 |
Identity: 29.7% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|17538326|ref|NP_502520.1| ribonuclease PH-like (26.1 kD) (4N865) [Caenorhabditis elegans] gi|6226696|sp|Q17533|RR4... |
| Match: gi|19112052|ref|NP_595260.1| |
score: 75.87 |
e-value: 2.2e-12 |
Identity: 34.43% |
Span: 363bp (24.7%) |
Frame: 1 |
| gi|19112052|ref|NP_595260.1| hypothetical protein [Schizosaccharomyces pombe] gi|29336579|sp|O42894|RR46_SCHPO Putati... |
| Match: gi|20093819|ref|NP_613666.1| |
score: 74.71 |
e-value: 4.9e-12 |
Identity: 29.79% |
Span: 534bp (36.4%) |
Frame: 1 |
| gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH [Methanopyrus kandleri AV19] gi|29336819|sp|Q8TYC1|E... |
| Match: gi|39587718|emb|CAE58656.1| |
score: 74.33 |
e-value: 6.4e-12 |
Identity: 30.57% |
Span: 444bp (30.2%) |
Frame: 1 |
| gi|39587718|emb|CAE58656.1| Hypothetical protein CBG01825 [Caenorhabditis briggsae] |
| Match: gi|21228725|ref|NP_634647.1| |
score: 73.94 |
e-value: 8.3e-12 |
Identity: 30.12% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|21228725|ref|NP_634647.1| Ribonuclease [Methanosarcina mazei Goe1] gi|29336795|sp|Q8PTT8|ECX1_METMA Probable exoso... |
| Match: gi|15920655|ref|NP_376324.1| |
score: 73.94 |
e-value: 8.3e-12 |
Identity: 28.48% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|15920655|ref|NP_376324.1| 247aa long hypothetical ribonuclease PH [Sulfolobus tokodaii] gi|29336896|sp|Q975G8|ECX1... |
| Match: gi|45185722|ref|NP_983438.1| |
score: 73.56 |
e-value: 1.1e-11 |
Identity: 30.77% |
Span: 618bp (42.1%) |
Frame: 1 |
| gi|45185722|ref|NP_983438.1| ACR035Wp [Eremothecium gossypii] >gi|44981477|gb|AAS51262.1| ACR035Wp [Eremothecium goss... |
| Match: gi|46135695|ref|XP_389539.1| |
score: 73.56 |
e-value: 1.1e-11 |
Identity: 31.84% |
Span: 477bp (32.5%) |
Frame: 1 |
| gi|46135695|ref|XP_389539.1| hypothetical protein FG09363.1 [Gibberella zeae PH-1] >gi|42553839|gb|EAA76682.1| hypoth... |
| Match: gi|48837580|ref|ZP_00294553.1| |
score: 73.17 |
e-value: 1.4e-11 |
Identity: 29.7% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|48837580|ref|ZP_00294553.1| COG0689: RNase PH [Methanosarcina barkeri str. fusaro] |
| Match: gi|19114994|ref|NP_594082.1| |
score: 72.79 |
e-value: 1.9e-11 |
Identity: 30.17% |
Span: 507bp (34.5%) |
Frame: 1 |
| gi|19114994|ref|NP_594082.1| putative ribonuclease PH-like [Schizosaccharomyces pombe] gi|21759394|sp|O42872|RR41_SCH... |
| Match: gi|7435290|pir||T11740 |
score: 72.79 |
e-value: 1.9e-11 |
Identity: 30.17% |
Span: 507bp (34.5%) |
Frame: 1 |
| gi|7435290|pir||T11740 hypothetical protein - fission yeast (Schizosaccharomyces pombe) gi|1749490|dbj|BAA13803.1| si... |
| Match: gi|41152247|ref|NP_957033.1| |
score: 72.4 |
e-value: 2.4e-11 |
Identity: 30.46% |
Span: 420bp (28.6%) |
Frame: 1 |
| putative exosome complex exonuclease RRP41 [Danio rerio] >gi37747963|gb|AAH59525.1| Exosc4 protein [Danio rerio] >gi|... |
| Match: gi|14601412|ref|NP_147949.1| |
score: 72.4 |
e-value: 2.4e-11 |
Identity: 28.48% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|14601412|ref|NP_147949.1| ribonuclease PH [Aeropyrum pernix] gi|29337017|sp|Q9YC03|ECX1_AERPE Probable exosome com... |
| Match: gi|15897636|ref|NP_342241.1| |
score: 71.63 |
e-value: 4.1e-11 |
Identity: 27.88% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus solfataricus] gi|29337007|sp|Q9UXC2|ECX1_SULSO Probabl... |
| Match: gi|48853120|ref|ZP_00307301.1| |
score: 70.86 |
e-value: 7e-11 |
Identity: 28.05% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|48853120|ref|ZP_00307301.1| COG0689: RNase PH [Ferroplasma acidarmanus] |
| Match: gi|42408306|dbj|BAD09460.1| |
score: 68.94 |
e-value: 2.7e-10 |
Identity: 27.12% |
Span: 684bp (46.6%) |
Frame: 1 |
| gi|42408306|dbj|BAD09460.1| putative ribonuclease PH [Oryza sativa (japonica cultivar-group)] |
| Match: gi|42567185|ref|NP_194479.2| |
score: 68.55 |
e-value: 3.5e-10 |
Identity: 26.5% |
Span: 666bp (45.3%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi124300968|gb|ABN04736.1| At4g27490 [A... |
| Match: gi|49073220|ref|XP_400842.1| |
score: 68.55 |
e-value: 3.5e-10 |
Identity: 27.07% |
Span: 648bp (44.1%) |
Frame: 1 |
| gi|49073220|ref|XP_400842.1| hypothetical protein UM03227.1 [Ustilago maydis 521] >gi|46099099|gb|EAK84332.1| hypothe... |
| Match: gi|41469640|gb|AAS07363.1| |
score: 68.17 |
e-value: 4.6e-10 |
Identity: 30.49% |
Span: 468bp (31.9%) |
Frame: 1 |
| putative exoribonuclease [Oryza sativa Japonica Group] >gi108712055|gb|ABF99850.1| 3' exoribonuclease family, domain ... |
| Match: gi|48477466|ref|YP_023172.1| |
score: 67.78 |
e-value: 6e-10 |
Identity: 27.36% |
Span: 573bp (39.0%) |
Frame: 1 |
| gi|48477466|ref|YP_023172.1| ribonuclease PH [Picrophilus torridus DSM 9790] >gi|48430114|gb|AAT42979.1| ribonuclease... |
| Match: gi|46108418|ref|XP_381267.1| |
score: 67.4 |
e-value: 7.8e-10 |
Identity: 23.47% |
Span: 588bp (40.0%) |
Frame: 1 |
| gi|46108418|ref|XP_381267.1| hypothetical protein FG01091.1 [Gibberella zeae PH-1] >gi|42545075|gb|EAA67918.1| hypoth... |
| Match: gi|17531759|ref|NP_496284.1| |
score: 65.85 |
e-value: 2.3e-09 |
Identity: 26.67% |
Span: 450bp (30.6%) |
Frame: 1 |
| gi|17531759|ref|NP_496284.1| ribonuclease (23.0 kD) (2K883) [Caenorhabditis elegans] gi|7495958|pir||T19247 hypotheti... |
| Match: gi|41351115|gb|AAH65602.1| |
score: 65.47 |
e-value: 3e-09 |
Identity: 28.14% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|41351115|gb|AAH65602.1| Unknown (protein for IMAGE:6966522) [Danio rerio] |
| Match: gi|39579728|emb|CAE56478.1| |
score: 65.08 |
e-value: 3.9e-09 |
Identity: 27.59% |
Span: 519bp (35.3%) |
Frame: 1 |
| gi|39579728|emb|CAE56478.1| Hypothetical protein CBG24192 [Caenorhabditis briggsae] |
| Match: gi|45184858|ref|NP_982576.1| |
score: 63.93 |
e-value: 8.6e-09 |
Identity: 26.8% |
Span: 447bp (30.4%) |
Frame: 1 |
| gi|45184858|ref|NP_982576.1| AAR035Cp [Eremothecium gossypii] >gi|44980467|gb|AAS50400.1| AAR035Cp [Eremothecium goss... |
| Match: gi|32409023|ref|XP_324992.1| |
score: 63.93 |
e-value: 8.6e-09 |
Identity: 27.46% |
Span: 501bp (34.1%) |
Frame: 1 |
| gi|32409023|ref|XP_324992.1| hypothetical protein [Neurospora crassa] gi|28926134|gb|EAA35119.1| hypothetical protein... |
| Match: gi|19074636|ref|NP_586142.1| |
score: 63.93 |
e-value: 8.6e-09 |
Identity: 26.87% |
Span: 399bp (27.2%) |
Frame: 1 |
| gi|19074636|ref|NP_586142.1| BELONGS TO THE RNASE PH (EXOSOME) FAMILY [Encephalitozoon cuniculi] gi|19069278|emb|CAD2... |
| Match: gi|49092976|ref|XP_407949.1| |
score: 63.93 |
e-value: 8.6e-09 |
Identity: 29.52% |
Span: 453bp (30.8%) |
Frame: 1 |
| gi|49092976|ref|XP_407949.1| hypothetical protein AN3812.2 [Aspergillus nidulans FGSC A4] >gi|40740830|gb|EAA60020.1|... |
| Match: gi|38099358|gb|EAA46715.1| |
score: 63.16 |
e-value: 1.5e-08 |
Identity: 26.26% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|38099358|gb|EAA46715.1| hypothetical protein MG09936.4 [Magnaporthe grisea 70-15] |
| Match: gi|23484066|gb|EAA19527.1| |
score: 62.77 |
e-value: 1.9e-08 |
Identity: 26.9% |
Span: 417bp (28.4%) |
Frame: 1 |
| gi|23484066|gb|EAA19527.1| exonuclease RRP41, putative [Plasmodium yoelii yoelii] |
| Match: gi|25152573|ref|NP_497279.2| |
score: 62.39 |
e-value: 2.5e-08 |
Identity: 27.78% |
Span: 483bp (32.9%) |
Frame: 1 |
| gi|25152573|ref|NP_497279.2| actin Related protein 2/3 compleX component ARX-4, exosome complex exonuclease, ribosoma... |
| Match: gi|1723689|sp|P53256|RR46_YEAST |
score: 62.39 |
e-value: 2.5e-08 |
Identity: 24.47% |
Span: 687bp (46.8%) |
Frame: 1 |
| gi|1723689|sp|P53256|RR46_YEAST Exosome complex exonuclease RRP46 (Ribosomal RNA processing protein 46) gi|2132604|pi... |
| Match: gi|37362654|ref|NP_011609.2| |
score: 62 |
e-value: 3.3e-08 |
Identity: 25.69% |
Span: 630bp (42.9%) |
Frame: 1 |
| gi|37362654|ref|NP_011609.2| Ribosomal RNA Processing; Rrp46p [Saccharomyces cerevisiae] |
| Match: gi|39597415|emb|CAE59645.1| |
score: 61.62 |
e-value: 4.3e-08 |
Identity: 25.33% |
Span: 450bp (30.6%) |
Frame: 1 |
| gi|39597415|emb|CAE59645.1| Hypothetical protein CBG03059 [Caenorhabditis briggsae] |
| Match: gi|47210411|emb|CAF91679.1| |
score: 61.62 |
e-value: 4.3e-08 |
Identity: 26.95% |
Span: 468bp (31.9%) |
Frame: 1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|6321634|ref|NP_011711.1| |
score: 61.62 |
e-value: 4.3e-08 |
Identity: 30.99% |
Span: 477bp (32.5%) |
Frame: 1 |
| gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; Ribosomal RNA Processing; Ski6p [Saccharomyces cerevis... |
| Match: gi|34851927|ref|XP_226471.2| |
score: 61.23 |
e-value: 5.6e-08 |
Identity: 28.72% |
Span: 498bp (33.9%) |
Frame: 1 |
| gi|34851927|ref|XP_226471.2| similar to homolog of yeast mRNA transport regulator 3 [Rattus norvegicus] |
| Match: gi|41615042|ref|NP_963540.1| |
score: 61.23 |
e-value: 5.6e-08 |
Identity: 30.38% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|41615042|ref|NP_963540.1| NEQ248 [Nanoarchaeum equitans Kin4-M] gi|40068766|gb|AAR39101.1| NEQ248 [Nanoarchaeum eq... |
| Match: gi|49073021|ref|XP_400760.1| |
score: 60.08 |
e-value: 1.2e-07 |
Identity: 26.67% |
Span: 516bp (35.1%) |
Frame: 1 |
| gi|49073021|ref|XP_400760.1| hypothetical protein UM03145.1 [Ustilago maydis 521] >gi|46099142|gb|EAK84375.1| hypothe... |
| Match: gi|17402904|ref|NP_478126.1| |
score: 59.69 |
e-value: 1.6e-07 |
Identity: 29.05% |
Span: 471bp (32.1%) |
Frame: 1 |
| gi|17402904|ref|NP_478126.1| homolog of yeast mRNA transport regulator 3 [Homo sapiens] |
| Match: gi|30794378|ref|NP_082550.1| |
score: 59.69 |
e-value: 1.6e-07 |
Identity: 28.89% |
Span: 471bp (32.1%) |
Frame: 1 |
| gi|30794378|ref|NP_082550.1| Mtr3 (mRNA transport regulator 3)-homolog; Mtr3 (mRNA transport regulator 3)-homolog (ye... |
| Match: gi|32398930|emb|CAD98395.1| |
score: 58.92 |
e-value: 2.8e-07 |
Identity: 28.28% |
Span: 390bp (26.5%) |
Frame: 1 |
| gi|32398930|emb|CAD98395.1| ribonuclease PH-like protein, possible [Cryptosporidium parvum] |
| Match: gi|24667071|ref|NP_649157.1| |
score: 58.54 |
e-value: 3.6e-07 |
Identity: 30.91% |
Span: 465bp (31.7%) |
Frame: 1 |
| gi|24667071|ref|NP_649157.1| CG8025-PA [Drosophila melanogaster] gi|7293727|gb|AAF49096.1| CG8025-PA [Drosophila mela... |
| Match: gi|14250906|emb|CAC39258.1| |
score: 57.77 |
e-value: 6.2e-07 |
Identity: 26.95% |
Span: 393bp (26.8%) |
Frame: 1 |
| gi|14250906|emb|CAC39258.1| Rrp41p homologue [Trypanosoma brucei] |
| Match: gi|38109224|gb|EAA55128.1| |
score: 57 |
e-value: 1.1e-06 |
Identity: 24.61% |
Span: 663bp (45.1%) |
Frame: 1 |
| gi|38109224|gb|EAA55128.1| hypothetical protein MG06785.4 [Magnaporthe grisea 70-15] |
| Match: gi|23509478|ref|NP_702145.1| |
score: 56.61 |
e-value: 1.4e-06 |
Identity: 23.81% |
Span: 465bp (31.7%) |
Frame: 1 |
| gi|23509478|ref|NP_702145.1| exosome complex exonuclease rrp41, putative [Plasmodium falciparum 3D7] gi|23497324|gb|A... |
| Match: gi|25136928|emb|CAD56698.1| |
score: 55.07 |
e-value: 4e-06 |
Identity: 23.84% |
Span: 489bp (33.3%) |
Frame: 1 |
| gi|25136928|emb|CAD56698.1| exosome-associated protein 4 [Trypanosoma brucei] |
| Match: gi|46199080|ref|YP_004747.1| |
score: 55.07 |
e-value: 4e-06 |
Identity: 28.57% |
Span: 393bp (26.8%) |
Frame: 1 |
| gi|46199080|ref|YP_004747.1| polynucleotide phosphorylase [Thermus thermophilus HB27] >gi|4138650|emb|CAB06341.1| pol... |
| Match: gi|7488820|pir||T06540 |
score: 53.91 |
e-value: 8.9e-06 |
Identity: 26.35% |
Span: 393bp (26.8%) |
Frame: 1 |
| gi|7488820|pir||T06540 polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - garden pea gi|2286200|gb|AAC50039.1| ... |
| Match: gi|6006870|gb|AAF00646.1| |
score: 53.91 |
e-value: 8.9e-06 |
Identity: 26.9% |
Span: 393bp (26.8%) |
Frame: 1 |
| gi|6006870|gb|AAF00646.1| putative polynucleotide phosphorylase [Arabidopsis thaliana] gi|6091752|gb|AAF03462.1| puta... |
| Match: gi|46226443|gb|EAK87443.1| |
score: 53.91 |
e-value: 8.9e-06 |
Identity: 26.29% |
Span: 480bp (32.7%) |
Frame: 1 |
| gi|46226443|gb|EAK87443.1| archeo-eukaryotic exosomal RNAse, transcripts identified by EST [Cryptosporidium parvum] |
| Match: gi|7413616|emb|CAB85703.1| |
score: 53.91 |
e-value: 8.9e-06 |
Identity: 26.9% |
Span: 393bp (26.8%) |
Frame: 1 |
| putative polynucleotide phosphorylase [Arabidopsis thaliana] |
| Match: gi|30678905|ref|NP_187021.2| |
score: 53.91 |
e-value: 8.9e-06 |
Identity: 26.9% |
Span: 393bp (26.8%) |
Frame: 1 |
| RIF10 (resistant to inhibition with FSM 10); 3'-5'-exoribonuclease/ RNA binding / nucleic acid binding / polyribonucl... |
| Match: gi|15676656|ref|NP_273800.1| |
score: 53.53 |
e-value: 1.2e-05 |
Identity: 25.93% |
Span: 438bp (29.8%) |
Frame: 1 |
| gi|15676656|ref|NP_273800.1| polyribonucleotide nucleotidyltransferase [Neisseria meningitidis MC58] gi|11279142|pir|... |
| Match: gi|15793926|ref|NP_283748.1| |
score: 53.14 |
e-value: 1.5e-05 |
Identity: 25.93% |
Span: 438bp (29.8%) |
Frame: 1 |
| gi|15793926|ref|NP_283748.1| putative polyribonucleotide nucleotidyltransferase [Neisseria meningitidis Z2491] gi|112... |
| Match: gi|32034381|ref|ZP_00134571.1| |
score: 52.76 |
e-value: 2e-05 |
Identity: 25.64% |
Span: 429bp (29.2%) |
Frame: 1 |
| gi|32034381|ref|ZP_00134571.1| COG1185: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Act... |
| Match: gi|19705029|ref|NP_602524.1| |
score: 52.76 |
e-value: 2e-05 |
Identity: 24.42% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|19705029|ref|NP_602524.1| Polyribonucleotide nucleotidyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC... |
| Match: gi|33152626|ref|NP_873979.1| |
score: 52.37 |
e-value: 2.6e-05 |
Identity: 25.64% |
Span: 429bp (29.2%) |
Frame: 1 |
| gi|33152626|ref|NP_873979.1| polyribonucleotide nucleotidyltransferase; polynucleotide phosphorylase [Haemophilus duc... |
| Match: gi|34763065|ref|ZP_00144038.1| |
score: 52.37 |
e-value: 2.6e-05 |
Identity: 24.42% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|34763065|ref|ZP_00144038.1| Polyribonucleotide nucleotidyltransferase [Fusobacterium nucleatum subsp. vincentii AT... |
| Match: gi|7716531|gb|AAF68421.1| |
score: 51.99 |
e-value: 3.4e-05 |
Identity: 25.64% |
Span: 429bp (29.2%) |
Frame: 1 |
| gi|7716531|gb|AAF68421.1| polynucleotide phosphorylase [Pasteurella multocida] |
| Match: gi|15602979|ref|NP_246051.1| |
score: 51.99 |
e-value: 3.4e-05 |
Identity: 25.64% |
Span: 429bp (29.2%) |
Frame: 1 |
| gi|15602979|ref|NP_246051.1| Pnp [Pasteurella multocida] gi|12721458|gb|AAK03198.1| Pnp [Pasteurella multocida] |
| Match: gi|30248196|ref|NP_840266.1| |
score: 51.99 |
e-value: 3.4e-05 |
Identity: 25.31% |
Span: 438bp (29.8%) |
Frame: 1 |
| gi|30248196|ref|NP_840266.1| pnp; polyribonucleotide nucleotidyltransferase protein [Nitrosomonas europaea ATCC 19718... |
| Match: gi|21243412|ref|NP_642994.1| |
score: 51.99 |
e-value: 3.4e-05 |
Identity: 26.42% |
Span: 438bp (29.8%) |
Frame: 1 |
| gi|21243412|ref|NP_642994.1| polynucleotide phosphorylase [Xanthomonas axonopodis pv. citri str. 306] gi|21108963|gb|... |
| Match: gi|17546786|ref|NP_520188.1| |
score: 51.99 |
e-value: 3.4e-05 |
Identity: 26.35% |
Span: 402bp (27.4%) |
Frame: 1 |
| gi|17546786|ref|NP_520188.1| PROBABLE POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE PROTEIN [Ralstonia solanacearum] gi|1... |
| Match: gi|48824146|ref|ZP_00285564.1| |
score: 51.6 |
e-value: 4.4e-05 |
Identity: 25% |
Span: 468bp (31.9%) |
Frame: 1 |
| gi|48824146|ref|ZP_00285564.1| COG1185: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Ent... |
| Match: gi|48770882|ref|ZP_00275225.1| |
score: 51.6 |
e-value: 4.4e-05 |
Identity: 26.35% |
Span: 402bp (27.4%) |
Frame: 1 |
| gi|48770882|ref|ZP_00275225.1| COG1185: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Ral... |
| Match: gi|15241441|ref|NP_196962.1| |
score: 51.6 |
e-value: 4.4e-05 |
Identity: 27.81% |
Span: 465bp (31.7%) |
Frame: 1 |
| polyribonucleotide nucleotidyltransferase, putative [Arabidopsis thaliana] >gi4971998|emb|CAB43864.1| polynucleotide ... |
| Match: gi|46132516|ref|ZP_00171021.2| |
score: 51.6 |
e-value: 4.4e-05 |
Identity: 26.35% |
Span: 402bp (27.4%) |
Frame: 1 |
| gi|46132516|ref|ZP_00171021.2| COG1185: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Ral... |
|
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At3g46210.1 |
score: 387.1 |
e-value: 1e-107 |
Identity: 78.45% |
Span: 696bp (47.4%) |
Frame: 1 |
| At3g46210.1 68410.m04633 expressed protein tRNA nucleotidyltransferase, Methanobacterium thermoautotrophicum, PIR:A69... |
| Match: At2g07110.1 |
score: 94.36 |
e-value: 1.5e-19 |
Identity: 50.91% |
Span: 276bp (18.8%) |
Frame: 1 |
| At2g07110.1 68409.m00726 hypothetical protein |
| Match: At3g61620.1 |
score: 84.73 |
e-value: 1.2e-16 |
Identity: 29.95% |
Span: 531bp (36.1%) |
Frame: 1 |
| At3g61620.1 68410.m06380 exonuclease RRP41 |
| Match: At4g27490.1 |
score: 68.55 |
e-value: 9e-12 |
Identity: 26.5% |
Span: 666bp (45.3%) |
Frame: 1 |
| At4g27490.1 68411.m03596 expressed protein tRNA nucleotidyltransferase -Methanobacterium thermoautotrophicum,PID:g262... |
| Match: At3g03710.1 |
score: 53.91 |
e-value: 2.3e-07 |
Identity: 26.9% |
Span: 393bp (26.8%) |
Frame: 1 |
| At3g03710.1 68410.m00348 polyribonucleotide nucleotidyltransferase, putative similar to polynucleotide phosphorylase ... |
| Match: At5g14580.1 |
score: 51.6 |
e-value: 1.1e-06 |
Identity: 27.81% |
Span: 465bp (31.7%) |
Frame: 1 |
| At5g14580.1 68412.m01577 polynucleotide phosphorylase |
| Match: At3g44130.1 |
score: 45.05 |
e-value: 0.00011 |
Identity: 52.38% |
Span: 126bp (8.6%) |
Frame: 1 |
| At3g44130.1 68410.m04383 F-box protein family contains F-box domain Pfam:PF00646 |
|
