| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|133872|sp|P29344|RR1_SPIOL |
score: 589 |
e-value: 8e-167 |
Identity: 82.48% |
Span: 1227bp (83.9%) |
Frame: 3 |
| gi|133872|sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplast precursor (CS1) gi|322404|pir||A44121 ribosomal p... |
| Match: gi|30692346|ref|NP_850903.1| |
score: 572.8 |
e-value: 6e-162 |
Identity: 78.85% |
Span: 1236bp (84.5%) |
Frame: 3 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|22299589|ref|NP_682836.1| |
score: 270.8 |
e-value: 4.6e-71 |
Identity: 49.84% |
Span: 918bp (62.7%) |
Frame: 3 |
| gi|22299589|ref|NP_682836.1| 30S ribosomal protein S1 [Thermosynechococcus elongatus BP-1] gi|22295773|dbj|BAC09598.1... |
| Match: gi|48894842|ref|ZP_00327951.1| |
score: 270 |
e-value: 7.9e-71 |
Identity: 51.71% |
Span: 873bp (59.7%) |
Frame: 3 |
| gi|48894842|ref|ZP_00327951.1| COG0539: Ribosomal protein S1 [Trichodesmium erythraeum IMS101] |
| Match: gi|23128852|ref|ZP_00110690.1| |
score: 268.1 |
e-value: 3e-70 |
Identity: 48.26% |
Span: 1011bp (69.1%) |
Frame: 3 |
| gi|23128852|ref|ZP_00110690.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|33863935|ref|NP_895495.1| |
score: 267.3 |
e-value: 5.1e-70 |
Identity: 48.51% |
Span: 906bp (61.9%) |
Frame: 3 |
| 30S ribosomal protein S1 [Prochlorococcus marinus str. MIT 9313] >gi33635519|emb|CAE21843.1| 30S ribosomal protein S1... |
| Match: gi|33866517|ref|NP_898076.1| |
score: 265.8 |
e-value: 1.5e-69 |
Identity: 48.51% |
Span: 906bp (61.9%) |
Frame: 3 |
| gi|33866517|ref|NP_898076.1| 30S ribosomal protein S1, homolog A [Synechococcus sp. WH 8102] gi|33633295|emb|CAE08500... |
| Match: gi|17227632|ref|NP_484180.1| |
score: 265.4 |
e-value: 1.9e-69 |
Identity: 46.33% |
Span: 1011bp (69.1%) |
Frame: 3 |
| gi|17227632|ref|NP_484180.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] gi|25311779|pir||AH1823 30S ribosomal pro... |
| Match: gi|45511683|ref|ZP_00163250.1| |
score: 264.2 |
e-value: 4.3e-69 |
Identity: 50.17% |
Span: 876bp (59.9%) |
Frame: 3 |
| gi|45511683|ref|ZP_00163250.1| COG0539: Ribosomal protein S1 [Synechococcus elongatus PCC 7942] |
| Match: gi|1173225|sp|P46228|RS1_SYNP6 |
score: 258.8 |
e-value: 1.8e-67 |
Identity: 49.49% |
Span: 876bp (59.9%) |
Frame: 3 |
| gi|1173225|sp|P46228|RS1_SYNP6 30S ribosomal protein S1 gi|1075612|pir||S51485 ribosomal protein S1 - Synechococcus s... |
| Match: gi|33860870|ref|NP_892431.1| |
score: 257.7 |
e-value: 4e-67 |
Identity: 47.35% |
Span: 903bp (61.7%) |
Frame: 3 |
| gi|33860870|ref|NP_892431.1| 30S ribosomal protein S1, homolog A [Prochlorococcus marinus subsp. pastoris str. CCMP13... |
| Match: gi|33239803|ref|NP_874745.1| |
score: 256.9 |
e-value: 6.9e-67 |
Identity: 46.53% |
Span: 906bp (61.9%) |
Frame: 3 |
| gi|33239803|ref|NP_874745.1| Ribosomal protein S1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237329|... |
| Match: gi|16330162|ref|NP_440890.1| |
score: 255 |
e-value: 2.6e-66 |
Identity: 50% |
Span: 876bp (59.9%) |
Frame: 3 |
| gi|16330162|ref|NP_440890.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500385|sp|P73530|RS1A_SYNY3 30... |
| Match: gi|40641370|emb|CAE51165.1| |
score: 241.9 |
e-value: 2.3e-62 |
Identity: 47.77% |
Span: 915bp (62.5%) |
Frame: 3 |
| gi|40641370|emb|CAE51165.1| ribosomal protein S1 homologue [Chlamydomonas reinhardtii] |
| Match: gi|37520556|ref|NP_923933.1| |
score: 240.7 |
e-value: 5.1e-62 |
Identity: 48.63% |
Span: 873bp (59.7%) |
Frame: 3 |
| gi|37520556|ref|NP_923933.1| 30S ribosomal protein S1 [Gloeobacter violaceus] gi|35211550|dbj|BAC88928.1| 30S ribosom... |
| Match: gi|32307552|gb|AAP79181.1| |
score: 223 |
e-value: 1.1e-56 |
Identity: 47.35% |
Span: 897bp (61.3%) |
Frame: 3 |
| gi|32307552|gb|AAP79181.1| ribosomal protein rpS1 [Bigelowiella natans] |
| Match: gi|17228573|ref|NP_485121.1| |
score: 181 |
e-value: 4.8e-44 |
Identity: 38.93% |
Span: 834bp (57.0%) |
Frame: 3 |
| gi|17228573|ref|NP_485121.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] gi|25311777|pir||AC1941 30S ribosomal pro... |
| Match: gi|45506869|ref|ZP_00159218.1| |
score: 177.2 |
e-value: 6.9e-43 |
Identity: 37.41% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|45506869|ref|ZP_00159218.1| COG0539: Ribosomal protein S1 [Anabaena variabilis ATCC 29413] |
| Match: gi|48891289|ref|ZP_00324829.1| |
score: 175.6 |
e-value: 2e-42 |
Identity: 37.54% |
Span: 867bp (59.3%) |
Frame: 3 |
| gi|48891289|ref|ZP_00324829.1| COG0539: Ribosomal protein S1 [Trichodesmium erythraeum IMS101] |
| Match: gi|23126004|ref|ZP_00107914.1| |
score: 167.9 |
e-value: 4.2e-40 |
Identity: 35.86% |
Span: 861bp (58.9%) |
Frame: 3 |
| gi|23126004|ref|ZP_00107914.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|46129984|ref|ZP_00164646.2| |
score: 166.4 |
e-value: 1.2e-39 |
Identity: 36.88% |
Span: 843bp (57.6%) |
Frame: 3 |
| gi|46129984|ref|ZP_00164646.2| COG0539: Ribosomal protein S1 [Synechococcus elongatus PCC 7942] >gi|3122813|sp|O33698... |
| Match: gi|11465811|ref|NP_053955.1| |
score: 158.3 |
e-value: 3.3e-37 |
Identity: 37.79% |
Span: 771bp (52.7%) |
Frame: 3 |
| gi|11465811|ref|NP_053955.1| ribosomal protein S1 [Porphyra purpurea] gi|1710701|sp|P51345|RR1_PORPU Chloroplast 30S ... |
| Match: gi|33239981|ref|NP_874923.1| |
score: 157.1 |
e-value: 7.4e-37 |
Identity: 35.91% |
Span: 858bp (58.6%) |
Frame: 3 |
| gi|33239981|ref|NP_874923.1| Ribosomal protein S1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237507|... |
| Match: gi|33863501|ref|NP_895061.1| |
score: 153.3 |
e-value: 1.1e-35 |
Identity: 35.49% |
Span: 873bp (59.7%) |
Frame: 3 |
| gi|33863501|ref|NP_895061.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Prochlorococcus marinus str. MIT 9313... |
| Match: gi|33866272|ref|NP_897831.1| |
score: 153.3 |
e-value: 1.1e-35 |
Identity: 36.49% |
Span: 861bp (58.9%) |
Frame: 3 |
| gi|33866272|ref|NP_897831.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Synechococcus sp. WH 8102] gi|3363924... |
| Match: gi|16330820|ref|NP_441548.1| |
score: 146.7 |
e-value: 1e-33 |
Identity: 34.41% |
Span: 831bp (56.8%) |
Frame: 3 |
| gi|16330820|ref|NP_441548.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500386|sp|P74142|RS1B_SYNY3 30... |
| Match: gi|33861087|ref|NP_892648.1| |
score: 143.7 |
e-value: 8.5e-33 |
Identity: 33.7% |
Span: 825bp (56.4%) |
Frame: 3 |
| gi|33861087|ref|NP_892648.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Prochlorococcus marinus subsp. pastor... |
| Match: gi|16079345|ref|NP_390169.1| |
score: 123.6 |
e-value: 9.1e-27 |
Identity: 35.02% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|16079345|ref|NP_390169.1| alternate gene name: jofD~similar to ribosomal protein S1 homolog [Bacillus subtilis] gi... |
| Match: gi|23025134|ref|ZP_00064306.1| |
score: 122.1 |
e-value: 2.6e-26 |
Identity: 35.42% |
Span: 819bp (56.0%) |
Frame: 3 |
| gi|23025134|ref|ZP_00064306.1| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|1004353|gb|AAA77669.1| |
score: 119.8 |
e-value: 1.3e-25 |
Identity: 34.97% |
Span: 813bp (55.6%) |
Frame: 3 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|15614199|ref|NP_242502.1| |
score: 119.4 |
e-value: 1.7e-25 |
Identity: 33.73% |
Span: 735bp (50.2%) |
Frame: 3 |
| gi|15614199|ref|NP_242502.1| 30S ribosomal protein S1 [Bacillus halodurans] gi|25311771|pir||D83854 hypothetical prot... |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 119 |
e-value: 2.2e-25 |
Identity: 35.54% |
Span: 813bp (55.6%) |
Frame: 3 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|23099255|ref|NP_692721.1| |
score: 117.5 |
e-value: 6.5e-25 |
Identity: 32.54% |
Span: 726bp (49.6%) |
Frame: 3 |
| gi|23099255|ref|NP_692721.1| 30S ribosomal protein S1 [Oceanobacillus iheyensis HTE831] gi|22777484|dbj|BAC13756.1| 3... |
| Match: gi|1085376|pir||JC4026 |
score: 117.5 |
e-value: 6.5e-25 |
Identity: 35.27% |
Span: 780bp (53.3%) |
Frame: 3 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|41407423|ref|NP_960259.1| |
score: 113.2 |
e-value: 1.2e-23 |
Identity: 32.96% |
Span: 768bp (52.5%) |
Frame: 3 |
| gi|41407423|ref|NP_960259.1| RpsA [Mycobacterium avium subsp. paratuberculosis str. k10] >gi|41395775|gb|AAS03642.1| ... |
| Match: gi|7579906|gb|AAF64246.1| |
score: 112.8 |
e-value: 1.6e-23 |
Identity: 33.09% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|7579906|gb|AAF64246.1| 30S ribosomal protein S1 [Corynebacterium ammoniagenes] |
| Match: gi|31792816|ref|NP_855309.1| |
score: 112.1 |
e-value: 2.7e-23 |
Identity: 32.58% |
Span: 768bp (52.5%) |
Frame: 3 |
| gi|31792816|ref|NP_855309.1| PROBABLE RIBOSOMAL PROTEIN S1 RPSA [Mycobacterium bovis subsp. bovis AF2122/97] gi|31618... |
| Match: gi|15608768|ref|NP_216146.1| |
score: 112.1 |
e-value: 2.7e-23 |
Identity: 32.58% |
Span: 768bp (52.5%) |
Frame: 3 |
| gi|15608768|ref|NP_216146.1| rpsA [Mycobacterium tuberculosis H37Rv] gi|15841085|ref|NP_336122.1| ribosomal protein S... |
| Match: gi|23336678|ref|ZP_00121881.1| |
score: 110.9 |
e-value: 6.1e-23 |
Identity: 31.34% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|23336678|ref|ZP_00121881.1| COG0539: Ribosomal protein S1 [Bifidobacterium longum DJO10A] |
| Match: gi|21399415|ref|NP_655400.1| |
score: 110.9 |
e-value: 6.1e-23 |
Identity: 31.13% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|21399415|ref|NP_655400.1| S1, S1 RNA binding domain [Bacillus anthracis A2012] gi|30261593|ref|NP_843970.1| riboso... |
| Match: gi|23465561|ref|NP_696164.1| |
score: 110.9 |
e-value: 6.1e-23 |
Identity: 31.34% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|23465561|ref|NP_696164.1| 30S ribosomal protein S1 [Bifidobacterium longum NCC2705] gi|23326226|gb|AAN24800.1| 30S... |
| Match: gi|15827720|ref|NP_301983.1| |
score: 110.9 |
e-value: 6.1e-23 |
Identity: 32.58% |
Span: 768bp (52.5%) |
Frame: 3 |
| gi|15827720|ref|NP_301983.1| 30S ribosomal protein S1 [Mycobacterium leprae] gi|13432211|sp|P46836|RS1_MYCLE 30S ribo... |
| Match: gi|38233738|ref|NP_939505.1| |
score: 110.5 |
e-value: 8e-23 |
Identity: 31.99% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|38233738|ref|NP_939505.1| 30S ribosomal protein S1 [Corynebacterium diphtheriae] gi|38199999|emb|CAE49668.1| 30S r... |
| Match: gi|47565960|ref|ZP_00236998.1| |
score: 110.5 |
e-value: 8e-23 |
Identity: 31.25% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|47565960|ref|ZP_00236998.1| ribosomal protein S1 [Bacillus cereus G9241] >gi|47556877|gb|EAL15207.1| ribosomal pro... |
| Match: gi|30019646|ref|NP_831277.1| |
score: 110.5 |
e-value: 8e-23 |
Identity: 31.25% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|30019646|ref|NP_831277.1| SSU ribosomal protein S1P [Bacillus cereus ATCC 14579] gi|29895190|gb|AAP08478.1| SSU ri... |
| Match: gi|42780699|ref|NP_977946.1| |
score: 110.2 |
e-value: 1e-22 |
Identity: 31.52% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|42780699|ref|NP_977946.1| ribosomal protein S1 [Bacillus cereus ATCC 10987] >gi|3122814|sp|O06000|RS1H_BACC1 30S r... |
| Match: gi|22972622|ref|ZP_00019490.1| |
score: 110.2 |
e-value: 1e-22 |
Identity: 31.52% |
Span: 720bp (49.2%) |
Frame: 3 |
| gi|22972622|ref|ZP_00019490.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|19552573|ref|NP_600575.1| |
score: 109.4 |
e-value: 1.8e-22 |
Identity: 32.35% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|19552573|ref|NP_600575.1| ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|21324127|dbj|BAB98752.1|... |
| Match: gi|25028013|ref|NP_738067.1| |
score: 109 |
e-value: 2.3e-22 |
Identity: 32.35% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|25028013|ref|NP_738067.1| putative 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] gi|23493296|dbj|BAC... |
| Match: gi|48834699|ref|ZP_00291705.1| |
score: 107.5 |
e-value: 6.7e-22 |
Identity: 32.43% |
Span: 744bp (50.9%) |
Frame: 3 |
| gi|48834699|ref|ZP_00291705.1| COG0539: Ribosomal protein S1 [Thermobifida fusca] |
| Match: gi|22974624|ref|ZP_00020816.1| |
score: 106.3 |
e-value: 1.5e-21 |
Identity: 32.82% |
Span: 732bp (50.0%) |
Frame: 3 |
| gi|22974624|ref|ZP_00020816.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|49235459|ref|ZP_00329528.1| |
score: 106.3 |
e-value: 1.5e-21 |
Identity: 34.78% |
Span: 726bp (49.6%) |
Frame: 3 |
| gi|49235459|ref|ZP_00329528.1| COG0539: Ribosomal protein S1 [Moorella thermoacetica ATCC 39073] |
| Match: gi|46363045|ref|ZP_00225838.1| |
score: 105.9 |
e-value: 2e-21 |
Identity: 31.62% |
Span: 774bp (52.9%) |
Frame: 3 |
| gi|46363045|ref|ZP_00225838.1| COG0539: Ribosomal protein S1 [Kineococcus radiotolerans SRS30216] |
| Match: gi|15672820|ref|NP_266994.1| |
score: 105.9 |
e-value: 2e-21 |
Identity: 31.65% |
Span: 783bp (53.5%) |
Frame: 3 |
| gi|15672820|ref|NP_266994.1| 30S ribosomal protein S1 [Lactococcus lactis subsp. lactis] gi|25311775|pir||F86729 30S ... |
| Match: gi|28493260|ref|NP_787421.1| |
score: 105.5 |
e-value: 2.6e-21 |
Identity: 32.8% |
Span: 720bp (49.2%) |
Frame: 3 |
| gi|28493260|ref|NP_787421.1| 30S ribosomal protein S1 [Tropheryma whipplei str. Twist] gi|28476301|gb|AAO44390.1| 30S... |
| Match: gi|45547576|ref|ZP_00187622.1| |
score: 105.5 |
e-value: 2.6e-21 |
Identity: 29.92% |
Span: 732bp (50.0%) |
Frame: 3 |
| gi|45547576|ref|ZP_00187622.1| COG0539: Ribosomal protein S1 [Rubrobacter xylanophilus DSM 9941] |
| Match: gi|28572628|ref|NP_789408.1| |
score: 105.5 |
e-value: 2.6e-21 |
Identity: 32.8% |
Span: 720bp (49.2%) |
Frame: 3 |
| gi|28572628|ref|NP_789408.1| 30s ribosomal protein S1 [Tropheryma whipplei TW08/27] gi|28410760|emb|CAD67146.1| 30s r... |
| Match: gi|1098565|gb|AAA97575.1| |
score: 105.1 |
e-value: 3.3e-21 |
Identity: 37.93% |
Span: 570bp (39.0%) |
Frame: 3 |
| gi|1098565|gb|AAA97575.1| ribosomal S1 protein |
| Match: gi|28378535|ref|NP_785427.1| |
score: 104.8 |
e-value: 4.4e-21 |
Identity: 33.85% |
Span: 735bp (50.2%) |
Frame: 3 |
| gi|28378535|ref|NP_785427.1| ribosomal protein S1 [Lactobacillus plantarum WCFS1] gi|28271371|emb|CAD64276.1| ribosom... |
| Match: gi|48870746|ref|ZP_00323465.1| |
score: 104 |
e-value: 7.5e-21 |
Identity: 32.57% |
Span: 738bp (50.4%) |
Frame: 3 |
| gi|48870746|ref|ZP_00323465.1| COG0539: Ribosomal protein S1 [Pediococcus pentosaceus ATCC 25745] |
| Match: gi|23112215|ref|ZP_00097728.1| |
score: 103.6 |
e-value: 9.7e-21 |
Identity: 32% |
Span: 720bp (49.2%) |
Frame: 3 |
| gi|23112215|ref|ZP_00097728.1| COG0539: Ribosomal protein S1 [Desulfitobacterium hafniense] |
| Match: gi|21220480|ref|NP_626259.1| |
score: 103.6 |
e-value: 9.7e-21 |
Identity: 32.05% |
Span: 744bp (50.9%) |
Frame: 3 |
| gi|21220480|ref|NP_626259.1| 30S ribosomal protein S1 [Streptomyces coelicolor A3(2)] gi|7481749|pir||T35743 ribosoma... |
| Match: gi|48763666|ref|ZP_00268220.1| |
score: 103.2 |
e-value: 1.3e-20 |
Identity: 29.09% |
Span: 789bp (53.9%) |
Frame: 3 |
| gi|48763666|ref|ZP_00268220.1| COG0539: Ribosomal protein S1 [Rhodospirillum rubrum] |
| Match: gi|29832775|ref|NP_827409.1| |
score: 102.8 |
e-value: 1.7e-20 |
Identity: 32.05% |
Span: 744bp (50.9%) |
Frame: 3 |
| gi|29832775|ref|NP_827409.1| putative ribosomal protein S1 [Streptomyces avermitilis MA-4680] gi|29609895|dbj|BAC7394... |
| Match: gi|1085376|pir||JC4026 |
score: 78.57 |
e-value: 3.4e-13 |
Identity: 29.37% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|1004353|gb|AAA77669.1| |
score: 78.57 |
e-value: 3.4e-13 |
Identity: 29.37% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|1098565|gb|AAA97575.1| |
score: 77.41 |
e-value: 7.5e-13 |
Identity: 29.04% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|1098565|gb|AAA97575.1| ribosomal S1 protein |
| Match: gi|16079345|ref|NP_390169.1| |
score: 77.03 |
e-value: 9.8e-13 |
Identity: 29.96% |
Span: 735bp (50.2%) |
Frame: 3 |
| gi|16079345|ref|NP_390169.1| alternate gene name: jofD~similar to ribosomal protein S1 homolog [Bacillus subtilis] gi... |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 75.87 |
e-value: 2.2e-12 |
Identity: 29.04% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|28378535|ref|NP_785427.1| |
score: 73.94 |
e-value: 8.3e-12 |
Identity: 27.03% |
Span: 726bp (49.6%) |
Frame: 3 |
| gi|28378535|ref|NP_785427.1| ribosomal protein S1 [Lactobacillus plantarum WCFS1] gi|28271371|emb|CAD64276.1| ribosom... |
| Match: gi|45547576|ref|ZP_00187622.1| |
score: 73.17 |
e-value: 1.4e-11 |
Identity: 24.5% |
Span: 870bp (59.5%) |
Frame: 3 |
| gi|45547576|ref|ZP_00187622.1| COG0539: Ribosomal protein S1 [Rubrobacter xylanophilus DSM 9941] |
| Match: gi|15672820|ref|NP_266994.1| |
score: 71.63 |
e-value: 4.1e-11 |
Identity: 29.89% |
Span: 744bp (50.9%) |
Frame: 3 |
| gi|15672820|ref|NP_266994.1| 30S ribosomal protein S1 [Lactococcus lactis subsp. lactis] gi|25311775|pir||F86729 30S ... |
| Match: gi|23025134|ref|ZP_00064306.1| |
score: 71.25 |
e-value: 5.4e-11 |
Identity: 28.71% |
Span: 852bp (58.2%) |
Frame: 3 |
| gi|23025134|ref|ZP_00064306.1| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|41407423|ref|NP_960259.1| |
score: 70.86 |
e-value: 7e-11 |
Identity: 29.8% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|41407423|ref|NP_960259.1| RpsA [Mycobacterium avium subsp. paratuberculosis str. k10] >gi|41395775|gb|AAS03642.1| ... |
| Match: gi|23099255|ref|NP_692721.1| |
score: 69.71 |
e-value: 1.6e-10 |
Identity: 25.63% |
Span: 762bp (52.1%) |
Frame: 3 |
| gi|23099255|ref|NP_692721.1| 30S ribosomal protein S1 [Oceanobacillus iheyensis HTE831] gi|22777484|dbj|BAC13756.1| 3... |
| Match: gi|19552573|ref|NP_600575.1| |
score: 69.32 |
e-value: 2e-10 |
Identity: 29.15% |
Span: 702bp (48.0%) |
Frame: 3 |
| gi|19552573|ref|NP_600575.1| ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|21324127|dbj|BAB98752.1|... |
| Match: gi|15608768|ref|NP_216146.1| |
score: 68.94 |
e-value: 2.7e-10 |
Identity: 29.39% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|15608768|ref|NP_216146.1| rpsA [Mycobacterium tuberculosis H37Rv] gi|15841085|ref|NP_336122.1| ribosomal protein S... |
| Match: gi|7579906|gb|AAF64246.1| |
score: 68.94 |
e-value: 2.7e-10 |
Identity: 28.74% |
Span: 702bp (48.0%) |
Frame: 3 |
| gi|7579906|gb|AAF64246.1| 30S ribosomal protein S1 [Corynebacterium ammoniagenes] |
| Match: gi|31792816|ref|NP_855309.1| |
score: 68.94 |
e-value: 2.7e-10 |
Identity: 29.39% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|31792816|ref|NP_855309.1| PROBABLE RIBOSOMAL PROTEIN S1 RPSA [Mycobacterium bovis subsp. bovis AF2122/97] gi|31618... |
| Match: gi|38233738|ref|NP_939505.1| |
score: 68.55 |
e-value: 3.5e-10 |
Identity: 29.15% |
Span: 702bp (48.0%) |
Frame: 3 |
| gi|38233738|ref|NP_939505.1| 30S ribosomal protein S1 [Corynebacterium diphtheriae] gi|38199999|emb|CAE49668.1| 30S r... |
| Match: gi|15827720|ref|NP_301983.1| |
score: 68.55 |
e-value: 3.5e-10 |
Identity: 29.39% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|15827720|ref|NP_301983.1| 30S ribosomal protein S1 [Mycobacterium leprae] gi|13432211|sp|P46836|RS1_MYCLE 30S ribo... |
| Match: gi|21220480|ref|NP_626259.1| |
score: 67.78 |
e-value: 5.9e-10 |
Identity: 29.39% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|21220480|ref|NP_626259.1| 30S ribosomal protein S1 [Streptomyces coelicolor A3(2)] gi|7481749|pir||T35743 ribosoma... |
| Match: gi|25028013|ref|NP_738067.1| |
score: 67.4 |
e-value: 7.7e-10 |
Identity: 28.74% |
Span: 702bp (48.0%) |
Frame: 3 |
| gi|25028013|ref|NP_738067.1| putative 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] gi|23493296|dbj|BAC... |
| Match: gi|48834699|ref|ZP_00291705.1| |
score: 67.01 |
e-value: 1e-09 |
Identity: 29.39% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|48834699|ref|ZP_00291705.1| COG0539: Ribosomal protein S1 [Thermobifida fusca] |
| Match: gi|23465561|ref|NP_696164.1| |
score: 65.85 |
e-value: 2.3e-09 |
Identity: 26.12% |
Span: 696bp (47.6%) |
Frame: 3 |
| gi|23465561|ref|NP_696164.1| 30S ribosomal protein S1 [Bifidobacterium longum NCC2705] gi|23326226|gb|AAN24800.1| 30S... |
| Match: gi|49235459|ref|ZP_00329528.1| |
score: 64.7 |
e-value: 5e-09 |
Identity: 24.71% |
Span: 750bp (51.3%) |
Frame: 3 |
| gi|49235459|ref|ZP_00329528.1| COG0539: Ribosomal protein S1 [Moorella thermoacetica ATCC 39073] |
| Match: gi|46363045|ref|ZP_00225838.1| |
score: 64.7 |
e-value: 5e-09 |
Identity: 28.4% |
Span: 711bp (48.6%) |
Frame: 3 |
| gi|46363045|ref|ZP_00225838.1| COG0539: Ribosomal protein S1 [Kineococcus radiotolerans SRS30216] |
| Match: gi|48870746|ref|ZP_00323465.1| |
score: 64.31 |
e-value: 6.5e-09 |
Identity: 32.86% |
Span: 393bp (26.9%) |
Frame: 3 |
| gi|48870746|ref|ZP_00323465.1| COG0539: Ribosomal protein S1 [Pediococcus pentosaceus ATCC 25745] |
| Match: gi|23112215|ref|ZP_00097728.1| |
score: 63.16 |
e-value: 1.5e-08 |
Identity: 24.19% |
Span: 894bp (61.1%) |
Frame: 3 |
| gi|23112215|ref|ZP_00097728.1| COG0539: Ribosomal protein S1 [Desulfitobacterium hafniense] |
| Match: gi|22974624|ref|ZP_00020816.1| |
score: 62.77 |
e-value: 1.9e-08 |
Identity: 31.25% |
Span: 306bp (20.9%) |
Frame: 3 |
| gi|22974624|ref|ZP_00020816.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|28493260|ref|NP_787421.1| |
score: 60.85 |
e-value: 7.2e-08 |
Identity: 28.96% |
Span: 741bp (50.6%) |
Frame: 3 |
| gi|28493260|ref|NP_787421.1| 30S ribosomal protein S1 [Tropheryma whipplei str. Twist] gi|28476301|gb|AAO44390.1| 30S... |
| Match: gi|28572628|ref|NP_789408.1| |
score: 60.85 |
e-value: 7.2e-08 |
Identity: 28.96% |
Span: 741bp (50.6%) |
Frame: 3 |
| gi|28572628|ref|NP_789408.1| 30s ribosomal protein S1 [Tropheryma whipplei TW08/27] gi|28410760|emb|CAD67146.1| 30s r... |
| Match: gi|15614199|ref|NP_242502.1| |
score: 58.54 |
e-value: 3.6e-07 |
Identity: 23.81% |
Span: 783bp (53.5%) |
Frame: 3 |
| gi|15614199|ref|NP_242502.1| 30S ribosomal protein S1 [Bacillus halodurans] gi|25311771|pir||D83854 hypothetical prot... |
| Match: gi|23336678|ref|ZP_00121881.1| |
score: 58.15 |
e-value: 4.7e-07 |
Identity: 25.21% |
Span: 675bp (46.1%) |
Frame: 3 |
| gi|23336678|ref|ZP_00121881.1| COG0539: Ribosomal protein S1 [Bifidobacterium longum DJO10A] |
| Match: gi|48763666|ref|ZP_00268220.1| |
score: 57 |
e-value: 1e-06 |
Identity: 25.4% |
Span: 720bp (49.2%) |
Frame: 3 |
| gi|48763666|ref|ZP_00268220.1| COG0539: Ribosomal protein S1 [Rhodospirillum rubrum] |
| Match: gi|22972622|ref|ZP_00019490.1| |
score: 55.07 |
e-value: 4e-06 |
Identity: 28.97% |
Span: 303bp (20.7%) |
Frame: 3 |
| gi|22972622|ref|ZP_00019490.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|21399415|ref|NP_655400.1| |
score: 55.07 |
e-value: 4e-06 |
Identity: 26.97% |
Span: 687bp (47.0%) |
Frame: 3 |
| gi|21399415|ref|NP_655400.1| S1, S1 RNA binding domain [Bacillus anthracis A2012] gi|30261593|ref|NP_843970.1| riboso... |
| Match: gi|47565960|ref|ZP_00236998.1| |
score: 54.3 |
e-value: 6.8e-06 |
Identity: 26.56% |
Span: 687bp (47.0%) |
Frame: 3 |
| gi|47565960|ref|ZP_00236998.1| ribosomal protein S1 [Bacillus cereus G9241] >gi|47556877|gb|EAL15207.1| ribosomal pro... |
| Match: gi|42780699|ref|NP_977946.1| |
score: 53.91 |
e-value: 8.8e-06 |
Identity: 26.56% |
Span: 687bp (47.0%) |
Frame: 3 |
| gi|42780699|ref|NP_977946.1| ribosomal protein S1 [Bacillus cereus ATCC 10987] >gi|3122814|sp|O06000|RS1H_BACC1 30S r... |
| Match: gi|30019646|ref|NP_831277.1| |
score: 52.76 |
e-value: 2e-05 |
Identity: 31.11% |
Span: 378bp (25.8%) |
Frame: 3 |
| gi|30019646|ref|NP_831277.1| SSU ribosomal protein S1P [Bacillus cereus ATCC 14579] gi|29895190|gb|AAP08478.1| SSU ri... |
|
| 82 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At5g30510.1 |
score: 572.8 |
e-value: 1e-163 |
Identity: 78.85% |
Span: 1236bp (84.5%) |
Frame: 3 |
| At5g30510.1 68412.m03380 ribosomal protein S1 |
| Match: At1g71720.1 |
score: 80.88 |
e-value: 1.7e-15 |
Identity: 30.35% |
Span: 597bp (40.8%) |
Frame: 3 |
| At1g71720.1 68408.m07605 RIBOSOMAL PROTEIN -related similar to 30S RIBOSOMAL PROTEIN S1 GB:P46228 from [Synechococcus... |
| Match: At3g23700.1 |
score: 79.72 |
e-value: 3.9e-15 |
Identity: 35.81% |
Span: 390bp (26.7%) |
Frame: 3 |
| At3g23700.1 68410.m02715 expressed protein |
| Match: At5g14580.1 |
score: 68.17 |
e-value: 1.2e-11 |
Identity: 36.94% |
Span: 306bp (20.9%) |
Frame: 3 |
| At5g14580.1 68412.m01577 polynucleotide phosphorylase |
| Match: At3g11964.1 |
score: 63.16 |
e-value: 3.8e-10 |
Identity: 28.03% |
Span: 459bp (31.4%) |
Frame: 3 |
| At3g11964.1 68410.m01325 hypothetical protein similar to putative pre-rRNA processing protein GB:AAF23213 GI:6671953 ... |
| Match: At4g29060.1 |
score: 60.08 |
e-value: 3.2e-09 |
Identity: 36.84% |
Span: 225bp (15.4%) |
Frame: 3 |
| At4g29060.1 68411.m03787 expressed protein |
| Match: At2g40290.1 |
score: 53.91 |
e-value: 2.3e-07 |
Identity: 23.78% |
Span: 447bp (30.6%) |
Frame: 3 |
| At2g40290.1 68409.m04493 eukaryotic translation initiation factor 2 alpha subunit, eIF2 -related |
| Match: At2g40290.2 |
score: 53.91 |
e-value: 2.3e-07 |
Identity: 23.78% |
Span: 447bp (30.6%) |
Frame: 3 |
| At2g40290.2 68415.m04961 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-al... |
| Match: At5g05470.1 |
score: 48.91 |
e-value: 7.3e-06 |
Identity: 22.56% |
Span: 447bp (30.6%) |
Frame: 3 |
| At5g05470.1 68412.m00546 eukaryotic translation initiation factor 2 alpha subunit-related protein |
| Match: At3g03710.1 |
score: 42.36 |
e-value: 0.00069 |
Identity: 32.84% |
Span: 198bp (13.5%) |
Frame: 3 |
| At3g03710.1 68410.m00348 polyribonucleotide nucleotidyltransferase, putative similar to polynucleotide phosphorylase ... |
|
