| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At5G09850.1 |
score: 259 |
e-value: 2e-69 |
Identity: 46.98% |
Span: 1044bp (72.9%) |
Frame: 2 |
| transcription elongation factor-related | chr5:3063489-3065222 REVERSE |
| Match: At5G05140.1 |
score: 77.8 |
e-value: 1e-14 |
Identity: 29.74% |
Span: 531bp (37.1%) |
Frame: 2 |
| transcription elongation factor-related | chr5:1520354-1522298 FORWARD |
| Match: At3G10820.1 |
score: 67 |
e-value: 3e-11 |
Identity: 26.58% |
Span: 633bp (44.2%) |
Frame: 2 |
| transcription elongation factor-related | chr3:3387363-3389510 FORWARD |
| Match: At3G48050.2 |
score: 45.4 |
e-value: 8e-05 |
Identity: 34.92% |
Span: 189bp (13.2%) |
Frame: 2 |
| bromo-adjacent homology (BAH) domain-containing protein | chr3:17745255-17750397 REVERSE |
| Match: At3G48050.1 |
score: 45.4 |
e-value: 8e-05 |
Identity: 34.92% |
Span: 189bp (13.2%) |
Frame: 2 |
| bromo-adjacent homology (BAH) domain-containing protein | chr3:17745255-17750397 REVERSE |
| Match: At3G48060.1 |
score: 45.4 |
e-value: 8e-05 |
Identity: 34.92% |
Span: 189bp (13.2%) |
Frame: 2 |
| bromo-adjacent homology (BAH) domain-containing protein | chr3:17754219-17759357 REVERSE |
|
| 3 lower scoring hits censored -- only 6 best hits are stored. |
| genbank/nr [blastx] | Showing best 28 hits recorded |
| Match: gi|92873111|gb|ABE81609.1| |
score: 276 |
e-value: 2e-72 |
Identity: 53.57% |
Span: 1041bp (72.7%) |
Frame: 2 |
| Transcription |
| Match: gi|72384441|gb|AAZ67557.1| |
score: 261 |
e-value: 6e-68 |
Identity: 50.14% |
Span: 1023bp (71.4%) |
Frame: 2 |
| gi|72384441|gb|AAZ67557.1| 52O08_11 [Brassica rapa subsp. pekinensis] |
| Match: gi|18416107|ref|NP_568218.1| |
score: 259 |
e-value: 2e-67 |
Identity: 46.98% |
Span: 1044bp (72.9%) |
Frame: 2 |
| transcription elongation factor-related [Arabidopsis thaliana] |
| Match: gi|9758963|dbj|BAB09406.1| |
score: 257 |
e-value: 8e-67 |
Identity: 46.09% |
Span: 1044bp (72.9%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|108862239|gb|ABA95889.2| |
score: 220 |
e-value: 1e-55 |
Identity: 43.27% |
Span: 993bp (69.3%) |
Frame: 2 |
| transcription |
| Match: gi|77548900|gb|ABA91697.1| |
score: 217 |
e-value: 1e-54 |
Identity: 42.12% |
Span: 990bp (69.1%) |
Frame: 2 |
| gi|77548900|gb|ABA91697.1| hypothetical protein LOC_Os11g06650 [Oryza sativa (japonica cultivar-group)] >gi|62734379|... |
| Match: gi|20147241|gb|AAM10334.1| |
score: 208 |
e-value: 4e-52 |
Identity: 51.79% |
Span: 735bp (51.3%) |
Frame: 2 |
| gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana] >gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arab... |
| Match: gi|108862241|gb|ABA95891.2| |
score: 182 |
e-value: 3e-44 |
Identity: 49.56% |
Span: 645bp (45.0%) |
Frame: 2 |
| transcription elongation factor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108862240|gb|ABA95890.2| |
score: 174 |
e-value: 1e-41 |
Identity: 40.26% |
Span: 891bp (62.2%) |
Frame: 2 |
| transcription elongation factor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|77553096|gb|ABA95892.1| |
score: 116 |
e-value: 3e-24 |
Identity: 58.82% |
Span: 306bp (21.4%) |
Frame: 2 |
| transcription elongation factor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|42567655|ref|NP_196133.3| |
score: 77.8 |
e-value: 1e-12 |
Identity: 29.74% |
Span: 531bp (37.1%) |
Frame: 2 |
| transcription elongation factor-related [Arabidopsis thaliana] >gi9759255|dbj|BAB09690.1| unnamed protein product [Ar... |
| Match: gi|50939565|ref|XP_479310.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 29.73% |
Span: 621bp (43.4%) |
Frame: 2 |
| gi|50939565|ref|XP_479310.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|50509934|dbj|BAD30255.1| un... |
| Match: gi|50900484|ref|XP_462675.1| |
score: 70.1 |
e-value: 2e-10 |
Identity: 61.4% |
Span: 171bp (11.9%) |
Frame: 2 |
| gi|50900484|ref|XP_462675.1| OSJNBa0093F12.5 [Oryza sativa (japonica cultivar-group)] >gi|50928405|ref|XP_473730.1| O... |
| Match: gi|15228385|ref|NP_187693.1| |
score: 67 |
e-value: 2e-09 |
Identity: 26.58% |
Span: 633bp (44.2%) |
Frame: 2 |
| gi|15228385|ref|NP_187693.1| hypothetical protein [Arabidopsis thaliana] gi|6630548|gb|AAF19567.1| hypothetical prote... |
| Match: gi|37531732|ref|NP_920168.1| |
score: 66.6 |
e-value: 3e-09 |
Identity: 27.98% |
Span: 576bp (40.2%) |
Frame: 2 |
| gi|37531732|ref|NP_920168.1| putative transcription elongation factor [Oryza sativa (japonica cultivar-group)] gi|145... |
| Match: gi|51038233|gb|AAT94036.1| |
score: 66.2 |
e-value: 4e-09 |
Identity: 25.9% |
Span: 642bp (44.8%) |
Frame: 2 |
| hypothetical protein [Oryza sativa Japonica Group] |
| Match: gi|77556896|gb|ABA99692.1| |
score: 66.2 |
e-value: 4e-09 |
Identity: 68.18% |
Span: 132bp (9.2%) |
Frame: 2 |
| gi|77556896|gb|ABA99692.1| hypothetical protein LOC_Os12g39290 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37531730|ref|NP_920167.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 27.04% |
Span: 576bp (40.2%) |
Frame: 2 |
| gi|37531730|ref|NP_920167.1| putative transcription elongation factor [Oryza sativa (japonica cultivar-group)] gi|145... |
| Match: gi|53793292|dbj|BAD54514.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 26.15% |
Span: 573bp (40.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|37532806|ref|NP_920705.1| |
score: 55.8 |
e-value: 5e-06 |
Identity: 40.91% |
Span: 198bp (13.8%) |
Frame: 2 |
| gi|37532806|ref|NP_920705.1| putative transcription elongation factor [Oryza sativa (japonica cultivar-group)] gi|200... |
| Match: gi|110288880|gb|ABG66008.1| |
score: 55.8 |
e-value: 5e-06 |
Identity: 40.91% |
Span: 198bp (13.8%) |
Frame: 2 |
| transposon |
| Match: gi|34902488|ref|NP_912590.1| |
score: 55.1 |
e-value: 8e-06 |
Identity: 25.22% |
Span: 588bp (41.1%) |
Frame: 2 |
| gi|34902488|ref|NP_912590.1| P0581F09.1 [Oryza sativa (japonica cultivar-group)] gi|15408813|dbj|BAB64205.1| P0581F09... |
| Match: gi|56785021|dbj|BAD82603.1| |
score: 55.1 |
e-value: 8e-06 |
Identity: 25.22% |
Span: 588bp (41.1%) |
Frame: 2 |
| hypothetical protein [Oryza sativa Japonica Group] |
| Match: gi|53792838|dbj|BAD53871.1| |
score: 54.3 |
e-value: 1e-05 |
Identity: 24.57% |
Span: 636bp (44.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|20148541|gb|AAM10161.1| |
score: 52 |
e-value: 7e-05 |
Identity: 46.81% |
Span: 141bp (9.8%) |
Frame: 2 |
| unknown |
| Match: gi|109004934|ref|XP_001113562.1| |
score: 52 |
e-value: 7e-05 |
Identity: 31% |
Span: 300bp (20.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|56205416|emb|CAI22668.1| |
score: 51.6 |
e-value: 9e-05 |
Identity: 32% |
Span: 300bp (20.9%) |
Frame: 2 |
| novel |
| Match: gi|23271582|gb|AAH35374.1| |
score: 51.6 |
e-value: 9e-05 |
Identity: 32% |
Span: 300bp (20.9%) |
Frame: 2 |
| Chromosome |
|
| 87 lower scoring hits censored -- only 28 best hits are stored. |
