| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At1G04080.1 |
score: 160 |
e-value: 2e-39 |
Identity: 78.26% |
Span: 276bp (20.7%) |
Frame: 3 |
| hydroxyproline-rich glycoprotein family protein | chr1:1051802-1056549 FORWARD |
| Match: At1G04080.1 |
score: 112 |
e-value: 7e-25 |
Identity: 53.98% |
Span: 330bp (24.7%) |
Frame: 1 |
| hydroxyproline-rich glycoprotein family protein | chr1:1051802-1056549 FORWARD |
| Match: At5G46400.1 |
score: 105 |
e-value: 5e-23 |
Identity: 52.27% |
Span: 264bp (19.8%) |
Frame: 3 |
| binding | chr5:18837259-18841749 FORWARD |
|
| 2 lower scoring hits censored -- only 3 best hits are stored. |
| genbank/nr [blastx] | Showing best 53 hits recorded |
| Match: gi|92894024|gb|ABE92037.1| |
score: 174 |
e-value: 1e-41 |
Identity: 84.04% |
Span: 282bp (21.1%) |
Frame: 3 |
| Protein |
| Match: gi|3142300|gb|AAC16751.1| |
score: 160 |
e-value: 1e-37 |
Identity: 78.26% |
Span: 276bp (20.7%) |
Frame: 3 |
| Contains similarity to pre-mRNA processing protein PRP39 gbL29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, ... |
| Match: gi|18379230|ref|NP_563700.1| |
score: 160 |
e-value: 1e-37 |
Identity: 78.26% |
Span: 276bp (20.7%) |
Frame: 3 |
| PRP39; binding [Arabidopsis thaliana] >gi15810565|gb|AAL07170.1| unknown protein [Arabidopsis thaliana] >gi|20259567|... |
| Match: gi|108706795|gb|ABF94590.1| |
score: 152 |
e-value: 3e-35 |
Identity: 68.75% |
Span: 288bp (21.6%) |
Frame: 3 |
| Pre-mRNA |
| Match: gi|92894024|gb|ABE92037.1| |
score: 122 |
e-value: 4e-26 |
Identity: 61.82% |
Span: 324bp (24.3%) |
Frame: 1 |
| Protein |
| Match: gi|102139749|gb|ABF69956.1| |
score: 118 |
e-value: 7e-25 |
Identity: 58.33% |
Span: 252bp (18.9%) |
Frame: 3 |
| pre-mRNA processing protein-related [Musa acuminata] |
| Match: gi|18379230|ref|NP_563700.1| |
score: 112 |
e-value: 5e-23 |
Identity: 53.98% |
Span: 330bp (24.7%) |
Frame: 1 |
| PRP39; binding [Arabidopsis thaliana] >gi15810565|gb|AAL07170.1| unknown protein [Arabidopsis thaliana] >gi|20259567|... |
| Match: gi|3142300|gb|AAC16751.1| |
score: 112 |
e-value: 5e-23 |
Identity: 53.98% |
Span: 330bp (24.7%) |
Frame: 1 |
| Contains similarity to pre-mRNA processing protein PRP39 gbL29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, ... |
| Match: gi|50945149|ref|XP_482102.1| |
score: 111 |
e-value: 7e-23 |
Identity: 54.02% |
Span: 261bp (19.5%) |
Frame: 3 |
| unknown |
| Match: gi|92895635|gb|ABE92782.1| |
score: 108 |
e-value: 6e-22 |
Identity: 56.04% |
Span: 273bp (20.4%) |
Frame: 3 |
| Involucrin |
| Match: gi|10177721|dbj|BAB11095.1| |
score: 105 |
e-value: 4e-21 |
Identity: 52.27% |
Span: 264bp (19.8%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|30694946|ref|NP_199452.2| |
score: 105 |
e-value: 4e-21 |
Identity: 52.27% |
Span: 264bp (19.8%) |
Frame: 3 |
| PRP39-2 [Arabidopsis thaliana] |
| Match: gi|108706795|gb|ABF94590.1| |
score: 87 |
e-value: 2e-15 |
Identity: 48.48% |
Span: 291bp (21.8%) |
Frame: 1 |
| Pre-mRNA |
| Match: gi|72086018|ref|XP_793456.1| |
score: 86.7 |
e-value: 2e-15 |
Identity: 46.99% |
Span: 249bp (18.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|91086167|ref|XP_970329.1| |
score: 85.5 |
e-value: 5e-15 |
Identity: 48.24% |
Span: 252bp (18.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|3169096|emb|CAA19289.1| |
score: 85.1 |
e-value: 7e-15 |
Identity: 44.32% |
Span: 264bp (19.8%) |
Frame: 3 |
| SPBC4B4.09 |
| Match: gi|72086018|ref|XP_793456.1| |
score: 85.1 |
e-value: 7e-15 |
Identity: 46.43% |
Span: 252bp (18.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|66509338|ref|XP_392380.2| |
score: 84.7 |
e-value: 9e-15 |
Identity: 46.43% |
Span: 252bp (18.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|68533753|gb|AAH98999.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 46.99% |
Span: 246bp (18.4%) |
Frame: 3 |
| Unknown |
| Match: gi|52218898|ref|NP_001004520.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 50.6% |
Span: 246bp (18.4%) |
Frame: 3 |
| PRP39 |
| Match: gi|94573493|gb|AAI16541.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 50.6% |
Span: 246bp (18.4%) |
Frame: 3 |
| PRP39 |
| Match: gi|109479291|ref|XP_001076405.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|33946299|ref|NP_060392.2| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| gi|33946299|ref|NP_060392.2| PRP39 pre-mRNA processing factor 39 homolog [Homo sapiens] |
| Match: gi|47219175|emb|CAG01838.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 51.22% |
Span: 243bp (18.2%) |
Frame: 3 |
| gi|47219175|emb|CAG01838.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|76647651|ref|XP_884388.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|73962829|ref|XP_863129.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|73962833|ref|XP_537427.2| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|76647637|ref|XP_884205.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|30704561|gb|AAH51886.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| gi|30704561|gb|AAH51886.1| PRPF39 protein [Homo sapiens] |
| Match: gi|73962831|ref|XP_863155.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|76647649|ref|XP_872002.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 46.34% |
Span: 246bp (18.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|45551993|ref|NP_733256.2| |
score: 80.5 |
e-value: 2e-13 |
Identity: 43.75% |
Span: 285bp (21.3%) |
Frame: 3 |
| gi|45551993|ref|NP_733256.2| CG1646-PB [Drosophila melanogaster] >gi|45446691|gb|AAN14302.2| CG1646-PB [Drosophila me... |
| Match: gi|28571914|ref|NP_788753.1| |
score: 80.5 |
e-value: 2e-13 |
Identity: 43.75% |
Span: 285bp (21.3%) |
Frame: 3 |
| CG1646-PC, |
| Match: gi|45552111|ref|NP_788754.2| |
score: 80.5 |
e-value: 2e-13 |
Identity: 43.75% |
Span: 285bp (21.3%) |
Frame: 3 |
| gi|45552111|ref|NP_788754.2| CG1646-PD [Drosophila melanogaster] >gi|45446692|gb|AAO41608.2| CG1646-PD [Drosophila me... |
| Match: gi|70994154|ref|XP_751924.1| |
score: 79.7 |
e-value: 3e-13 |
Identity: 38.54% |
Span: 273bp (20.4%) |
Frame: 3 |
| hypothetical |
| Match: gi|76647643|ref|XP_581849.2| |
score: 79.7 |
e-value: 3e-13 |
Identity: 45.68% |
Span: 243bp (18.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|67522356|ref|XP_659239.1| |
score: 79.3 |
e-value: 4e-13 |
Identity: 38.54% |
Span: 273bp (20.4%) |
Frame: 3 |
| hypothetical |
| Match: gi|108869608|gb|EAT33833.1| |
score: 79.3 |
e-value: 4e-13 |
Identity: 42.39% |
Span: 270bp (20.2%) |
Frame: 3 |
| conserved |
| Match: gi|88185865|gb|EAQ93333.1| |
score: 79 |
e-value: 5e-13 |
Identity: 44% |
Span: 225bp (16.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|83769015|dbj|BAE59152.1| |
score: 79 |
e-value: 5e-13 |
Identity: 39.58% |
Span: 273bp (20.4%) |
Frame: 3 |
| unnamed |
| Match: gi|47225250|emb|CAG09750.1| |
score: 78.2 |
e-value: 8e-13 |
Identity: 40.37% |
Span: 264bp (19.8%) |
Frame: 3 |
| gi|47225250|emb|CAG09750.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|111067578|gb|EAT88698.1| |
score: 78.2 |
e-value: 8e-13 |
Identity: 56.67% |
Span: 180bp (13.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|56788871|gb|AAH88586.1| |
score: 77.4 |
e-value: 1e-12 |
Identity: 43.21% |
Span: 243bp (18.2%) |
Frame: 3 |
| Prpf39-prov |
| Match: gi|68426063|ref|XP_690081.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 35% |
Span: 285bp (21.3%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|46108724|ref|XP_381420.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 50.77% |
Span: 195bp (14.6%) |
Frame: 3 |
| gi|46108724|ref|XP_381420.1| hypothetical protein FG01244.1 [Gibberella zeae PH-1] >gi|42545262|gb|EAA68105.1| hypoth... |
| Match: gi|39945152|ref|XP_362113.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 46.67% |
Span: 225bp (16.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|39593121|emb|CAE64590.1| |
score: 75.5 |
e-value: 5e-12 |
Identity: 43.75% |
Span: 240bp (18.0%) |
Frame: 3 |
| gi|39593121|emb|CAE64590.1| Hypothetical protein CBG09345 [Caenorhabditis briggsae] |
| Match: gi|14574132|gb|AAB37083.2| |
score: 73.9 |
e-value: 2e-11 |
Identity: 46.15% |
Span: 231bp (17.3%) |
Frame: 3 |
| Hypothetical |
| Match: gi|66810898|ref|XP_639156.1| |
score: 67.8 |
e-value: 1e-09 |
Identity: 33.7% |
Span: 267bp (20.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|49656877|emb|CAG89596.1| |
score: 67.4 |
e-value: 1e-09 |
Identity: 43.94% |
Span: 198bp (14.8%) |
Frame: 3 |
| unnamed |
| Match: gi|49528148|emb|CAG61805.1| |
score: 55.8 |
e-value: 4e-06 |
Identity: 31% |
Span: 297bp (22.2%) |
Frame: 3 |
| unnamed |
| Match: gi|50557016|ref|XP_505916.1| |
score: 55.1 |
e-value: 7e-06 |
Identity: 39.34% |
Span: 183bp (13.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|50302841|ref|XP_451357.1| |
score: 54.3 |
e-value: 1e-05 |
Identity: 33.82% |
Span: 198bp (14.8%) |
Frame: 3 |
| unnamed |
|
| 4 lower scoring hits censored -- only 53 best hits are stored. |
