| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At1G64860.1 |
score: 338 |
e-value: 2e-130 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip... |
| Match: At1G64860.1 |
score: 147 |
e-value: 2e-130 |
Identity: 68.27% |
Span: 312bp (23.5%) |
Frame: 3 |
| Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip... |
| Match: At5G13730.1 |
score: 113 |
e-value: 2e-29 |
Identity: 40.53% |
Span: 564bp (42.5%) |
Frame: 2 |
| Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:... |
| Match: At1G08540.1 |
score: 104 |
e-value: 4e-34 |
Identity: 33.66% |
Span: 600bp (45.2%) |
Frame: 2 |
| Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |... |
| Match: At2G36990.1 |
score: 86.3 |
e-value: 2e-29 |
Identity: 30.15% |
Span: 591bp (44.5%) |
Frame: 2 |
| Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At3G53920.1 |
score: 78.2 |
e-value: 1e-14 |
Identity: 28.79% |
Span: 585bp (44.1%) |
Frame: 2 |
| Symbols: SIG3, SIGC | SIGC (RNA polymerase sigma subunit C); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At5G24120.1 |
score: 67 |
e-value: 2e-11 |
Identity: 29.06% |
Span: 600bp (45.2%) |
Frame: 2 |
| Symbols: SIG5, SIGE | SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor... |
| Match: At2G36990.1 |
score: 62 |
e-value: 2e-29 |
Identity: 33.94% |
Span: 327bp (24.6%) |
Frame: 3 |
| Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio... |
| Match: At1G08540.1 |
score: 59.3 |
e-value: 4e-34 |
Identity: 31.97% |
Span: 363bp (27.4%) |
Frame: 3 |
| Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |... |
| Match: At5G13730.1 |
score: 34.7 |
e-value: 2e-29 |
Identity: 29.73% |
Span: 333bp (25.1%) |
Frame: 3 |
| Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:... |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|6682871|dbj|BAA88922.1| |
score: 386 |
e-value: 1e-157 |
Identity: 93.56% |
Span: 606bp (45.7%) |
Frame: 2 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|6682869|dbj|BAA88921.1| |
score: 358 |
e-value: 3e-146 |
Identity: 86.57% |
Span: 603bp (45.4%) |
Frame: 2 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|2706544|emb|CAA75859.1| |
score: 341 |
e-value: 1e-129 |
Identity: 82.18% |
Span: 606bp (45.7%) |
Frame: 2 |
| Sig1 [Sinapis alba] |
| Match: gi|2398851|dbj|BAA22214.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] |
| Match: gi|15217767|ref|NP_176666.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha... |
| Match: gi|2385344|emb|CAA74896.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| sigma factorB [Arabidopsis thaliana] |
| Match: gi|2565297|gb|AAB81958.1| |
score: 338 |
e-value: 1e-128 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| RNA polymerase sigma subunit 1 [Arabidopsis thaliana] |
| Match: gi|11762220|gb|AAG40388.1| |
score: 338 |
e-value: 5e-128 |
Identity: 81.19% |
Span: 606bp (45.7%) |
Frame: 2 |
| gi|11762220|gb|AAG40388.1| At1g64860 [Arabidopsis thaliana] |
| Match: gi|2780746|dbj|BAA24364.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (45.0%) |
Frame: 2 |
| gi|2780746|dbj|BAA24364.1| plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50941383|ref|XP_480219.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (45.0%) |
Frame: 2 |
| putative |
| Match: gi|50941385|ref|XP_480220.1| |
score: 294 |
e-value: 5e-110 |
Identity: 70.35% |
Span: 597bp (45.0%) |
Frame: 2 |
| putative |
| Match: gi|3893860|gb|AAC78467.1| |
score: 293 |
e-value: 3e-109 |
Identity: 70.3% |
Span: 606bp (45.7%) |
Frame: 2 |
| gi|3893860|gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays] |
| Match: gi|2624403|emb|CAA74653.1| |
score: 293 |
e-value: 7e-110 |
Identity: 70.3% |
Span: 606bp (45.7%) |
Frame: 2 |
| plastid |
| Match: gi|3769432|gb|AAC78468.1| |
score: 289 |
e-value: 5e-108 |
Identity: 71.36% |
Span: 597bp (45.0%) |
Frame: 2 |
| gi|3769432|gb|AAC78468.1| RNA polymerase sigma factor 2 [Zea mays] |
| Match: gi|4218586|emb|CAA10725.1| |
score: 285 |
e-value: 2e-106 |
Identity: 67.34% |
Span: 597bp (45.0%) |
Frame: 2 |
| gi|4218586|emb|CAA10725.1| chloroplast sigma factor [Triticum aestivum] |
| Match: gi|6682871|dbj|BAA88922.1| |
score: 196 |
e-value: 1e-157 |
Identity: 86.96% |
Span: 345bp (26.0%) |
Frame: 3 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|14669830|dbj|BAB62007.1| |
score: 194 |
e-value: 5e-67 |
Identity: 47.78% |
Span: 597bp (45.0%) |
Frame: 2 |
| PpSIG1 |
| Match: gi|6682869|dbj|BAA88921.1| |
score: 186 |
e-value: 3e-146 |
Identity: 80% |
Span: 345bp (26.0%) |
Frame: 3 |
| sigma factor [Nicotiana tabacum] |
| Match: gi|2706544|emb|CAA75859.1| |
score: 147 |
e-value: 1e-129 |
Identity: 63.48% |
Span: 345bp (26.0%) |
Frame: 3 |
| Sig1 [Sinapis alba] |
| Match: gi|2398851|dbj|BAA22214.1| |
score: 147 |
e-value: 1e-128 |
Identity: 68.27% |
Span: 312bp (23.5%) |
Frame: 3 |
| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] |
| Match: gi|2385344|emb|CAA74896.1| |
score: 147 |
e-value: 1e-128 |
Identity: 68.27% |
Span: 312bp (23.5%) |
Frame: 3 |
| sigma factorB [Arabidopsis thaliana] |
| Match: gi|15217767|ref|NP_176666.1| |
score: 147 |
e-value: 1e-128 |
Identity: 68.27% |
Span: 312bp (23.5%) |
Frame: 3 |
| SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha... |
| Match: gi|2565297|gb|AAB81958.1| |
score: 147 |
e-value: 1e-128 |
Identity: 68.27% |
Span: 312bp (23.5%) |
Frame: 3 |
| RNA polymerase sigma subunit 1 [Arabidopsis thaliana] |
| Match: gi|11762220|gb|AAG40388.1| |
score: 145 |
e-value: 5e-128 |
Identity: 67.31% |
Span: 312bp (23.5%) |
Frame: 3 |
| gi|11762220|gb|AAG40388.1| At1g64860 [Arabidopsis thaliana] |
| Match: gi|19910022|dbj|BAB87262.1| |
score: 134 |
e-value: 1e-42 |
Identity: 39.09% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta] |
| Match: gi|13812120|ref|NP_113247.1| |
score: 134 |
e-value: 1e-41 |
Identity: 39.09% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|13812120|ref|NP_113247.1| RNA-polymerase sigma factor [Guillardia theta] gi|25288491|pir||D90084 RNA-polymerase si... |
| Match: gi|50941385|ref|XP_480220.1| |
score: 129 |
e-value: 5e-110 |
Identity: 60.71% |
Span: 336bp (25.3%) |
Frame: 3 |
| putative |
| Match: gi|2624403|emb|CAA74653.1| |
score: 129 |
e-value: 7e-110 |
Identity: 58.04% |
Span: 336bp (25.3%) |
Frame: 3 |
| plastid |
| Match: gi|2780746|dbj|BAA24364.1| |
score: 129 |
e-value: 5e-110 |
Identity: 60.71% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|2780746|dbj|BAA24364.1| plastid RNA polymerase sigma factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33861053|ref|NP_892614.1| |
score: 129 |
e-value: 8e-39 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| gi|33861053|ref|NP_892614.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus subsp. pastoris ... |
| Match: gi|50941383|ref|XP_480219.1| |
score: 129 |
e-value: 5e-110 |
Identity: 60.71% |
Span: 336bp (25.3%) |
Frame: 3 |
| putative |
| Match: gi|78712381|gb|ABB49558.1| |
score: 129 |
e-value: 3e-39 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|3893860|gb|AAC78467.1| |
score: 128 |
e-value: 3e-109 |
Identity: 58.04% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|3893860|gb|AAC78467.1| RNA polymerase sigma factor 1 [Zea mays] |
| Match: gi|33239946|ref|NP_874888.1| |
score: 128 |
e-value: 5e-40 |
Identity: 38.86% |
Span: 573bp (43.2%) |
Frame: 2 |
| gi|33239946|ref|NP_874888.1| DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) [Prochlorococcus marinus sub... |
| Match: gi|84518456|ref|ZP_01005805.1| |
score: 128 |
e-value: 5e-39 |
Identity: 38.86% |
Span: 573bp (43.2%) |
Frame: 2 |
| RNA |
| Match: gi|72383665|ref|YP_293020.1| |
score: 128 |
e-value: 5e-41 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-... |
| Match: gi|4218586|emb|CAA10725.1| |
score: 127 |
e-value: 2e-106 |
Identity: 57.14% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|4218586|emb|CAA10725.1| chloroplast sigma factor [Triticum aestivum] |
| Match: gi|87123878|ref|ZP_01079728.1| |
score: 127 |
e-value: 4e-40 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|78196690|gb|ABB34455.1| |
score: 127 |
e-value: 2e-41 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|78169539|gb|ABB26636.1| |
score: 127 |
e-value: 4e-41 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|88807657|ref|ZP_01123169.1| |
score: 127 |
e-value: 2e-39 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| RNA |
| Match: gi|33866315|ref|NP_897874.1| |
score: 127 |
e-value: 1e-40 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| gi|33866315|ref|NP_897874.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] gi|33639290|e... |
| Match: gi|87302644|ref|ZP_01085461.1| |
score: 127 |
e-value: 3e-39 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| RNA |
| Match: gi|3769432|gb|AAC78468.1| |
score: 127 |
e-value: 5e-108 |
Identity: 55.36% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|3769432|gb|AAC78468.1| RNA polymerase sigma factor 2 [Zea mays] |
| Match: gi|558881|gb|AAB41506.1| |
score: 126 |
e-value: 3e-39 |
Identity: 38.07% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] |
| Match: gi|33863540|ref|NP_895100.1| |
score: 126 |
e-value: 4e-38 |
Identity: 38.34% |
Span: 573bp (43.2%) |
Frame: 2 |
| gi|33863540|ref|NP_895100.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus str. MIT 9313] g... |
| Match: gi|1588486|prf||2208419B |
score: 126 |
e-value: 3e-39 |
Identity: 38.07% |
Span: 585bp (44.1%) |
Frame: 2 |
| RNA polymerase sigma factor |
| Match: gi|22298160|ref|NP_681407.1| |
score: 122 |
e-value: 4e-36 |
Identity: 36.04% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|22298160|ref|NP_681407.1| principal RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] gi|22294339|d... |
| Match: gi|56750888|ref|YP_171589.1| |
score: 122 |
e-value: 5e-37 |
Identity: 38.54% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|56750888|ref|YP_171589.1| principal RNA polymerase sigma factor RpoD1 [Synechococcus elongatus PCC 6301] >gi|56685... |
| Match: gi|110169432|gb|ABG53972.1| |
score: 122 |
e-value: 3e-36 |
Identity: 36.55% |
Span: 585bp (44.1%) |
Frame: 2 |
| RNA |
| Match: gi|217140|dbj|BAA01749.1| |
score: 122 |
e-value: 5e-37 |
Identity: 38.54% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.] |
| Match: gi|81299460|ref|YP_399668.1| |
score: 122 |
e-value: 5e-37 |
Identity: 38.54% |
Span: 585bp (44.1%) |
Frame: 2 |
| Sigma-70 |
| Match: gi|35214335|dbj|BAC91703.1| |
score: 121 |
e-value: 5e-39 |
Identity: 37.56% |
Span: 585bp (44.1%) |
Frame: 2 |
| group2 |
| Match: gi|8118663|gb|AAF73062.1| |
score: 120 |
e-value: 4e-37 |
Identity: 36.55% |
Span: 585bp (44.1%) |
Frame: 2 |
| primary |
| Match: gi|75907632|ref|YP_321928.1| |
score: 120 |
e-value: 5e-37 |
Identity: 36.55% |
Span: 585bp (44.1%) |
Frame: 2 |
| gi|75907632|ref|YP_321928.1| Sigma 28 (Flagella/Sporulation) [Anabaena variabilis ATCC 29413] >gi|75701357|gb|ABA2103... |
| Match: gi|86607034|ref|YP_475797.1| |
score: 119 |
e-value: 6e-36 |
Identity: 35.53% |
Span: 585bp (44.1%) |
Frame: 2 |
| RNA |
| Match: gi|86609652|ref|YP_478414.1| |
score: 118 |
e-value: 4e-36 |
Identity: 35.53% |
Span: 585bp (44.1%) |
Frame: 2 |
| RNA |
| Match: gi|14669832|dbj|BAB62008.1| |
score: 118 |
e-value: 1e-35 |
Identity: 34.85% |
Span: 585bp (44.1%) |
Frame: 2 |
| PpSIG2 |
| Match: gi|23126139|ref|ZP_00108045.1| |
score: 118 |
e-value: 3e-37 |
Identity: 35.15% |
Span: 576bp (43.4%) |
Frame: 2 |
| gi|23126139|ref|ZP_00108045.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Nostoc punctifo... |
| Match: gi|1405331|dbj|BAA11832.1| |
score: 117 |
e-value: 2e-35 |
Identity: 37.93% |
Span: 597bp (45.0%) |
Frame: 2 |
| gi|1405331|dbj|BAA11832.1| chloroplast RNA polymerase sigma subunit [Cyanidium caldarium] |
| Match: gi|110168874|gb|ABG53414.1| |
score: 117 |
e-value: 3e-35 |
Identity: 34.33% |
Span: 597bp (45.0%) |
Frame: 2 |
| RNA |
| Match: gi|75907421|ref|YP_321717.1| |
score: 115 |
e-value: 2e-35 |
Identity: 33.66% |
Span: 600bp (45.2%) |
Frame: 2 |
| Sigma |
| Match: gi|23130601|ref|ZP_00112414.1| |
score: 114 |
e-value: 3e-36 |
Identity: 33.17% |
Span: 600bp (45.2%) |
Frame: 2 |
| gi|23130601|ref|ZP_00112414.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Nostoc punctifo... |
| Match: gi|86608149|ref|YP_476911.1| |
score: 111 |
e-value: 5e-38 |
Identity: 32.8% |
Span: 561bp (42.3%) |
Frame: 2 |
| RNA |
| Match: gi|86607249|ref|YP_476012.1| |
score: 108 |
e-value: 5e-37 |
Identity: 32.28% |
Span: 561bp (42.3%) |
Frame: 2 |
| RNA |
| Match: gi|14669830|dbj|BAB62007.1| |
score: 85.5 |
e-value: 5e-67 |
Identity: 43.4% |
Span: 318bp (24.0%) |
Frame: 3 |
| PpSIG1 |
| Match: gi|86608149|ref|YP_476911.1| |
score: 71.6 |
e-value: 5e-38 |
Identity: 32.43% |
Span: 333bp (25.1%) |
Frame: 3 |
| RNA |
| Match: gi|86607249|ref|YP_476012.1| |
score: 71.6 |
e-value: 5e-37 |
Identity: 31.53% |
Span: 333bp (25.1%) |
Frame: 3 |
| RNA |
| Match: gi|78196690|gb|ABB34455.1| |
score: 66.6 |
e-value: 2e-41 |
Identity: 35.96% |
Span: 336bp (25.3%) |
Frame: 3 |
| Sigma-70 |
| Match: gi|78169539|gb|ABB26636.1| |
score: 65.9 |
e-value: 4e-41 |
Identity: 35.96% |
Span: 336bp (25.3%) |
Frame: 3 |
| Sigma-70 |
| Match: gi|35214335|dbj|BAC91703.1| |
score: 65.5 |
e-value: 5e-39 |
Identity: 32.73% |
Span: 330bp (24.9%) |
Frame: 3 |
| group2 |
| Match: gi|72383665|ref|YP_293020.1| |
score: 64.7 |
e-value: 5e-41 |
Identity: 36.84% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-... |
| Match: gi|19910022|dbj|BAB87262.1| |
score: 64.3 |
e-value: 1e-42 |
Identity: 33.62% |
Span: 345bp (26.0%) |
Frame: 3 |
| gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta] |
| Match: gi|33866315|ref|NP_897874.1| |
score: 63.9 |
e-value: 1e-40 |
Identity: 35.09% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|33866315|ref|NP_897874.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] gi|33639290|e... |
| Match: gi|23130601|ref|ZP_00112414.1| |
score: 62.8 |
e-value: 3e-36 |
Identity: 37.11% |
Span: 291bp (21.9%) |
Frame: 3 |
| gi|23130601|ref|ZP_00112414.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Nostoc punctifo... |
| Match: gi|87123878|ref|ZP_01079728.1| |
score: 62.4 |
e-value: 4e-40 |
Identity: 35.09% |
Span: 336bp (25.3%) |
Frame: 3 |
| Sigma-70 |
| Match: gi|23126139|ref|ZP_00108045.1| |
score: 62.4 |
e-value: 3e-37 |
Identity: 29.13% |
Span: 309bp (23.3%) |
Frame: 3 |
| gi|23126139|ref|ZP_00108045.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Nostoc punctifo... |
| Match: gi|33239946|ref|NP_874888.1| |
score: 61.6 |
e-value: 5e-40 |
Identity: 33.96% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|33239946|ref|NP_874888.1| DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) [Prochlorococcus marinus sub... |
| Match: gi|13812120|ref|NP_113247.1| |
score: 61.2 |
e-value: 1e-41 |
Identity: 34.62% |
Span: 309bp (23.3%) |
Frame: 3 |
| gi|13812120|ref|NP_113247.1| RNA-polymerase sigma factor [Guillardia theta] gi|25288491|pir||D90084 RNA-polymerase si... |
| Match: gi|558881|gb|AAB41506.1| |
score: 61.2 |
e-value: 3e-39 |
Identity: 33.96% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] |
| Match: gi|1588486|prf||2208419B |
score: 61.2 |
e-value: 3e-39 |
Identity: 33.96% |
Span: 318bp (24.0%) |
Frame: 3 |
| RNA polymerase sigma factor |
| Match: gi|88807657|ref|ZP_01123169.1| |
score: 60.1 |
e-value: 2e-39 |
Identity: 34.21% |
Span: 336bp (25.3%) |
Frame: 3 |
| RNA |
| Match: gi|75907421|ref|YP_321717.1| |
score: 59.3 |
e-value: 2e-35 |
Identity: 34.02% |
Span: 291bp (21.9%) |
Frame: 3 |
| Sigma |
| Match: gi|8118663|gb|AAF73062.1| |
score: 59.3 |
e-value: 4e-37 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| primary |
| Match: gi|87302644|ref|ZP_01085461.1| |
score: 59.3 |
e-value: 3e-39 |
Identity: 34.21% |
Span: 336bp (25.3%) |
Frame: 3 |
| RNA |
| Match: gi|75907632|ref|YP_321928.1| |
score: 58.9 |
e-value: 5e-37 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|75907632|ref|YP_321928.1| Sigma 28 (Flagella/Sporulation) [Anabaena variabilis ATCC 29413] >gi|75701357|gb|ABA2103... |
| Match: gi|86609652|ref|YP_478414.1| |
score: 58.5 |
e-value: 4e-36 |
Identity: 35.19% |
Span: 309bp (23.3%) |
Frame: 3 |
| RNA |
| Match: gi|84518456|ref|ZP_01005805.1| |
score: 58.5 |
e-value: 5e-39 |
Identity: 33.33% |
Span: 336bp (25.3%) |
Frame: 3 |
| RNA |
| Match: gi|217140|dbj|BAA01749.1| |
score: 57.8 |
e-value: 5e-37 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.] |
| Match: gi|81299460|ref|YP_399668.1| |
score: 57.8 |
e-value: 5e-37 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| Sigma-70 |
| Match: gi|56750888|ref|YP_171589.1| |
score: 57.8 |
e-value: 5e-37 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|56750888|ref|YP_171589.1| principal RNA polymerase sigma factor RpoD1 [Synechococcus elongatus PCC 6301] >gi|56685... |
| Match: gi|86607034|ref|YP_475797.1| |
score: 57.4 |
e-value: 6e-36 |
Identity: 33.33% |
Span: 309bp (23.3%) |
Frame: 3 |
| RNA |
| Match: gi|1405331|dbj|BAA11832.1| |
score: 57.4 |
e-value: 2e-35 |
Identity: 29.73% |
Span: 327bp (24.6%) |
Frame: 3 |
| gi|1405331|dbj|BAA11832.1| chloroplast RNA polymerase sigma subunit [Cyanidium caldarium] |
| Match: gi|78712381|gb|ABB49558.1| |
score: 57.4 |
e-value: 3e-39 |
Identity: 33.96% |
Span: 318bp (24.0%) |
Frame: 3 |
| Sigma-70 |
| Match: gi|33863540|ref|NP_895100.1| |
score: 57 |
e-value: 4e-38 |
Identity: 32.46% |
Span: 336bp (25.3%) |
Frame: 3 |
| gi|33863540|ref|NP_895100.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus str. MIT 9313] g... |
| Match: gi|14669832|dbj|BAB62008.1| |
score: 56.6 |
e-value: 1e-35 |
Identity: 31.19% |
Span: 327bp (24.6%) |
Frame: 3 |
| PpSIG2 |
| Match: gi|33861053|ref|NP_892614.1| |
score: 56.2 |
e-value: 8e-39 |
Identity: 33.96% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|33861053|ref|NP_892614.1| Putative principal RNA polymerase sigma factor [Prochlorococcus marinus subsp. pastoris ... |
| Match: gi|110168874|gb|ABG53414.1| |
score: 56.2 |
e-value: 3e-35 |
Identity: 35.16% |
Span: 273bp (20.6%) |
Frame: 3 |
| RNA |
| Match: gi|110169432|gb|ABG53972.1| |
score: 55.1 |
e-value: 3e-36 |
Identity: 33.02% |
Span: 318bp (24.0%) |
Frame: 3 |
| RNA |
| Match: gi|22298160|ref|NP_681407.1| |
score: 54.7 |
e-value: 4e-36 |
Identity: 32.43% |
Span: 318bp (24.0%) |
Frame: 3 |
| gi|22298160|ref|NP_681407.1| principal RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] gi|22294339|d... |
|
| 400 lower scoring hits censored -- only 100 best hits are stored. |
