All Stored BLAST annotations for SGN-U585012
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157347877|emb|CAO22464.1| score: 445 e-value: 5e-123 Identity: 71.2% Span: 945bp (71.3%) Frame: 1
unnamed
Match: gi|217074186|gb|ACJ85453.1| score: 424 e-value: 1e-116 Identity: 66.46% Span: 948bp (71.5%) Frame: 1
unknown [Medicago truncatula]
Match: gi|15218790|ref|NP_171835.1| score: 411 e-value: 8e-113 Identity: 65.62% Span: 948bp (71.5%) Frame: 1
ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease [Arabidopsis thaliana] >gi3850568...
Match: gi|115459464|ref|NP_001053332.1| score: 402 e-value: 5e-110 Identity: 65.93% Span: 948bp (71.5%) Frame: 1
Os04g0520000 [Oryza sativa (japonica cultivar-group)] >gi21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza sativa (japo...
Match: gi|194704246|gb|ACF86207.1| score: 397 e-value: 2e-108 Identity: 64.35% Span: 948bp (71.5%) Frame: 1
unknown [Zea mays]
Match: gi|125572173|gb|EAZ13688.1| score: 395 e-value: 6e-108 Identity: 65.08% Span: 942bp (71.1%) Frame: 1
hypothetical
Match: gi|168019913|ref|XP_001762488.1| score: 283 e-value: 2e-74 Identity: 44.74% Span: 957bp (72.2%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162686221|gb|EDQ72611.1| predicted protein [Physcomitrella...
Match: gi|219363297|ref|NP_001136723.1| score: 264 e-value: 2e-68 Identity: 76.84% Span: 528bp (39.8%) Frame: 1
hypothetical protein LOC100216860 [Zea mays] >gi194696768|gb|ACF82468.1| unknown [Zea mays]
Match: gi|159488815|ref|XP_001702398.1| score: 226 e-value: 5e-57 Identity: 43.54% Span: 855bp (64.5%) Frame: 1
hypothetical protein CHLREDRAFT_108094 [Chlamydomonas reinhardtii] >gi158271192|gb|EDO97018.1| predicted protein [Chl...
Match: gi|66802526|ref|XP_635135.1| score: 211 e-value: 1e-52 Identity: 39.65% Span: 849bp (64.1%) Frame: 1
hypothetical protein DDB_G0291310 [Dictyostelium discoideum AX4] >gi60463454|gb|EAL61639.1| hypothetical protein DDB_...
Match: gi|20378673|gb|AAM20932.1|AF449619_1 score: 201 e-value: 2e-49 Identity: 44.44% Span: 747bp (56.4%) Frame: 1
exonuclease
Match: gi|124359809|gb|ABN06127.1| score: 195 e-value: 9e-48 Identity: 55.93% Span: 528bp (39.8%) Frame: 1
Nucleic acid-binding, OB-fold, putative [Medicago truncatula]
Match: gi|58258185|ref|XP_566505.1| score: 194 e-value: 1e-47 Identity: 39.69% Span: 759bp (57.3%) Frame: 1
exosome
Match: gi|213404002|ref|XP_002172773.1| score: 193 e-value: 3e-47 Identity: 42.36% Span: 684bp (51.6%) Frame: 1
exosome complex exonuclease RRP4 [Schizosaccharomyces japonicus yFS275] >gi212000820|gb|EEB06480.1| exosome complex e...
Match: gi|19113896|ref|NP_592984.1| score: 193 e-value: 3e-47 Identity: 48.73% Span: 591bp (44.6%) Frame: 1
gi|19113896|ref|NP_592984.1| conserved hypothetical protein [Schizosaccharomyces pombe] gi|1175376|sp|Q09704|RRP4_SCH...
Match: gi|145347330|ref|XP_001418126.1| score: 193 e-value: 3e-47 Identity: 36.7% Span: 906bp (68.4%) Frame: 1
predicted protein [Ostreococcus lucimarinus CCE9901] >gi144578354|gb|ABO96419.1| predicted protein [Ostreococcus luci...
Match: gi|170586918|ref|XP_001898226.1| score: 192 e-value: 4e-47 Identity: 38.49% Span: 861bp (65.0%) Frame: 1
exosome
Match: gi|169865500|ref|XP_001839349.1| score: 192 e-value: 7e-47 Identity: 45.78% Span: 675bp (50.9%) Frame: 1
hypothetical
Match: gi|170104928|ref|XP_001883677.1| score: 191 e-value: 2e-46 Identity: 44.35% Span: 681bp (51.4%) Frame: 1
predicted protein [Laccaria bicolor S238N-H82] >gi164641312|gb|EDR05573.1| predicted protein [Laccaria bicolor S238N-...
Match: gi|71021183|ref|XP_760822.1| score: 186 e-value: 3e-45 Identity: 38.02% Span: 729bp (55.0%) Frame: 1
hypothetical protein UM04675.1 [Ustilago maydis 521] >gi46100196|gb|EAK85429.1| hypothetical protein UM04675.1 [Ustil...
Match: gi|219416729|ref|XP_002206171.1| score: 184 e-value: 2e-44 Identity: 46.23% Span: 633bp (47.8%) Frame: 1
hypothetical
Match: gi|66542493|ref|XP_396929.2| score: 184 e-value: 2e-44 Identity: 40.68% Span: 786bp (59.3%) Frame: 1
gi|66542493|ref|XP_396929.2| PREDICTED: similar to GA17783-PA [Apis mellifera]
Match: gi|164663335|ref|XP_001732789.1| score: 183 e-value: 3e-44 Identity: 49.15% Span: 516bp (38.9%) Frame: 1
hypothetical
Match: gi|157822341|ref|NP_001102422.1| score: 179 e-value: 5e-43 Identity: 37.99% Span: 906bp (68.4%) Frame: 1
exosome
Match: gi|125809363|ref|XP_001361091.1| score: 179 e-value: 5e-43 Identity: 39.57% Span: 834bp (62.9%) Frame: 1
GA17783-PA
Match: gi|194755110|ref|XP_001959835.1| score: 179 e-value: 6e-43 Identity: 38.85% Span: 834bp (62.9%) Frame: 1
GF11836
Match: gi|148234237|ref|NP_001085606.1| score: 179 e-value: 6e-43 Identity: 52.49% Span: 543bp (41.0%) Frame: 1
MGC82596
Match: gi|115727635|ref|XP_789513.2| score: 177 e-value: 1e-42 Identity: 50.29% Span: 525bp (39.6%) Frame: 1
PREDICTED:
Match: gi|153792053|ref|NP_001012816.2| score: 177 e-value: 2e-42 Identity: 42.02% Span: 771bp (58.2%) Frame: 1
exosome
Match: gi|146218712|emb|CAM96513.1| score: 177 e-value: 1e-42 Identity: 37.63% Span: 822bp (62.0%) Frame: 1
RRP4
Match: gi|21450259|ref|NP_659135.1| score: 177 e-value: 1e-42 Identity: 46.7% Span: 636bp (48.0%) Frame: 1
gi|21450259|ref|NP_659135.1| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exoribonuclease [Mus musculus]...
Match: gi|195026059|ref|XP_001986172.1| score: 176 e-value: 5e-42 Identity: 39.56% Span: 819bp (61.8%) Frame: 1
GH20673
Match: gi|53136852|emb|CAG32755.1| score: 176 e-value: 5e-42 Identity: 42.8% Span: 729bp (55.0%) Frame: 1
gi|53136852|emb|CAG32755.1| hypothetical protein [Gallus gallus] >gi|61098302|ref|NP_001012816.1| exosome component 2...
Match: gi|149738212|ref|XP_001499276.1| score: 175 e-value: 9e-42 Identity: 47.06% Span: 612bp (46.2%) Frame: 1
PREDICTED:
Match: gi|114053077|ref|NP_001040026.1| score: 175 e-value: 7e-42 Identity: 47.55% Span: 612bp (46.2%) Frame: 1
exosome
Match: gi|195489207|ref|XP_002092639.1| score: 175 e-value: 9e-42 Identity: 36.33% Span: 894bp (67.5%) Frame: 1
GE11554
Match: gi|195121992|ref|XP_002005496.1| score: 175 e-value: 9e-42 Identity: 39.42% Span: 819bp (61.8%) Frame: 1
GI19036
Match: gi|156553719|ref|XP_001600703.1| score: 175 e-value: 7e-42 Identity: 39.54% Span: 786bp (59.3%) Frame: 1
PREDICTED:
Match: gi|213511156|ref|NP_001134204.1| score: 175 e-value: 9e-42 Identity: 49.21% Span: 567bp (42.8%) Frame: 1
Exosome
Match: gi|71895889|ref|NP_001025658.1| score: 175 e-value: 9e-42 Identity: 53.29% Span: 501bp (37.8%) Frame: 1
exosome
Match: gi|195455765|ref|XP_002074857.1| score: 175 e-value: 7e-42 Identity: 39.56% Span: 819bp (61.8%) Frame: 1
GK22923
Match: gi|194885394|ref|XP_001976429.1| score: 175 e-value: 9e-42 Identity: 36.67% Span: 894bp (67.5%) Frame: 1
GG20018
Match: gi|73967942|ref|XP_850770.1| score: 174 e-value: 2e-41 Identity: 47.06% Span: 612bp (46.2%) Frame: 1
gi|73967942|ref|XP_850770.1| PREDICTED: similar to Exosome complex exonuclease RRP4 (Ribosomal RNA processing protein...
Match: gi|195384177|ref|XP_002050794.1| score: 174 e-value: 1e-41 Identity: 37.42% Span: 879bp (66.3%) Frame: 1
GJ20003
Match: gi|157133832|ref|XP_001656299.1| score: 174 e-value: 2e-41 Identity: 36.99% Span: 876bp (66.1%) Frame: 1
rrp4
Match: gi|149410316|ref|XP_001507703.1| score: 173 e-value: 3e-41 Identity: 50.83% Span: 543bp (41.0%) Frame: 1
PREDICTED:
Match: gi|24762324|ref|NP_611807.1| score: 173 e-value: 4e-41 Identity: 37.77% Span: 834bp (62.9%) Frame: 1
gi|24762324|ref|NP_611807.1| CG3931-PA [Drosophila melanogaster] gi|7291605|gb|AAF47028.1| CG3931-PA [Drosophila mela...
Match: gi|21428348|gb|AAM49834.1| score: 173 e-value: 4e-41 Identity: 37.77% Span: 834bp (62.9%) Frame: 1
gi|21428348|gb|AAM49834.1| GM02257p [Drosophila melanogaster]
Match: gi|50549949|ref|XP_502446.1| score: 172 e-value: 6e-41 Identity: 37.4% Span: 786bp (59.3%) Frame: 1
gi|50549949|ref|XP_502446.1| hypothetical protein [Yarrowia lipolytica] >gi|49648314|emb|CAG80634.1| unnamed protein ...
Match: gi|195347132|ref|XP_002040108.1| score: 172 e-value: 6e-41 Identity: 37.77% Span: 834bp (62.9%) Frame: 1
GM15529
Match: gi|109110020|ref|XP_001106567.1| score: 172 e-value: 5e-41 Identity: 46.57% Span: 612bp (46.2%) Frame: 1
PREDICTED:
Match: gi|195586086|ref|XP_002082809.1| score: 172 e-value: 5e-41 Identity: 37.77% Span: 834bp (62.9%) Frame: 1
GD25033
Match: gi|19923403|ref|NP_055100.2| score: 172 e-value: 5e-41 Identity: 47.06% Span: 612bp (46.2%) Frame: 1
gi|19923403|ref|NP_055100.2| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exorib [Homo sapiens] gi|13878...
Match: gi|122920914|pdb|2NN6|H score: 172 e-value: 5e-41 Identity: 47.06% Span: 612bp (46.2%) Frame: 1
Chain
Match: gi|6321860|ref|NP_011936.1| score: 171 e-value: 1e-40 Identity: 38.4% Span: 729bp (55.0%) Frame: 1
gi|6321860|ref|NP_011936.1| Ribosomal RNA Processing; Rrp4p [Saccharomyces cerevisiae] gi|731671|sp|P38792|RRP4_YEAST...
Match: gi|190405851|gb|EDV09118.1| score: 171 e-value: 1e-40 Identity: 38.4% Span: 729bp (55.0%) Frame: 1
3'-5'
Match: gi|198417930|ref|XP_002126379.1| score: 171 e-value: 1e-40 Identity: 40.29% Span: 810bp (61.1%) Frame: 1
PREDICTED:
Match: gi|219114437|ref|XP_002176389.1| score: 171 e-value: 1e-40 Identity: 37.55% Span: 810bp (61.1%) Frame: 1
predicted
Match: gi|209877206|ref|XP_002140045.1| score: 170 e-value: 3e-40 Identity: 40.41% Span: 732bp (55.2%) Frame: 1
hypothetical
Match: gi|91078208|ref|XP_968880.1| score: 170 e-value: 3e-40 Identity: 42.93% Span: 615bp (46.4%) Frame: 1
PREDICTED:
Match: gi|62955121|ref|NP_001017572.1| score: 169 e-value: 7e-40 Identity: 51.5% Span: 501bp (37.8%) Frame: 1
exosome
Match: gi|47223594|emb|CAF99203.1| score: 167 e-value: 1e-39 Identity: 44.79% Span: 576bp (43.5%) Frame: 1
gi|47223594|emb|CAF99203.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|50309037|ref|XP_454524.1| score: 167 e-value: 3e-39 Identity: 35.4% Span: 825bp (62.3%) Frame: 1
gi|50309037|ref|XP_454524.1| unnamed protein product [Kluyveromyces lactis] >gi|49643659|emb|CAG99611.1| unnamed prot...
Match: gi|145245527|ref|XP_001395031.1| score: 167 e-value: 3e-39 Identity: 36.9% Span: 804bp (60.7%) Frame: 1
hypothetical
Match: gi|17544090|ref|NP_500978.1| score: 166 e-value: 6e-39 Identity: 34.35% Span: 786bp (59.3%) Frame: 1
gi|17544090|ref|NP_500978.1| homolog of Yeast rrp4 like (34.1 kD) (4H181) [Caenorhabditis elegans] gi|14574491|gb|AAK...
Match: gi|193695380|ref|XP_001950290.1| score: 166 e-value: 3e-39 Identity: 46.7% Span: 588bp (44.4%) Frame: 1
PREDICTED:
Match: gi|45184790|ref|NP_982508.1| score: 166 e-value: 3e-39 Identity: 41.52% Span: 672bp (50.7%) Frame: 1
gi|45184790|ref|NP_982508.1| AAL034Cp [Eremothecium gossypii] >gi|44980136|gb|AAS50332.1| AAL034Cp [Eremothecium goss...
Match: gi|170065837|ref|XP_001868042.1| score: 166 e-value: 4e-39 Identity: 36.36% Span: 825bp (62.3%) Frame: 1
exosome
Match: gi|167521940|ref|XP_001745308.1| score: 166 e-value: 6e-39 Identity: 44.92% Span: 558bp (42.1%) Frame: 1
predicted
Match: gi|157756631|ref|XP_001670659.1| score: 166 e-value: 6e-39 Identity: 34.73% Span: 786bp (59.3%) Frame: 1
Hypothetical
Match: gi|195999020|ref|XP_002109378.1| score: 165 e-value: 1e-38 Identity: 38% Span: 750bp (56.6%) Frame: 1
hypothetical
Match: gi|50289359|ref|XP_447110.1| score: 165 e-value: 1e-38 Identity: 43% Span: 600bp (45.3%) Frame: 1
gi|50289359|ref|XP_447110.1| unnamed protein product [Candida glabrata] >gi|49526419|emb|CAG60043.1| unnamed protein ...
Match: gi|170065835|ref|XP_001868041.1| score: 165 e-value: 1e-38 Identity: 43.52% Span: 579bp (43.7%) Frame: 1
exosome
Match: gi|156043601|ref|XP_001588357.1| score: 165 e-value: 7e-39 Identity: 36.49% Span: 819bp (61.8%) Frame: 1
hypothetical
Match: gi|211963824|gb|EEA99019.1| score: 165 e-value: 7e-39 Identity: 32.55% Span: 894bp (67.5%) Frame: 1
exosome
Match: gi|170045026|ref|XP_001850125.1| score: 165 e-value: 1e-38 Identity: 43.52% Span: 579bp (43.7%) Frame: 1
exosome
Match: gi|156837522|ref|XP_001642785.1| score: 164 e-value: 2e-38 Identity: 45.3% Span: 543bp (41.0%) Frame: 1
hypothetical
Match: gi|212511812|gb|EEB14694.1| score: 163 e-value: 3e-38 Identity: 50.89% Span: 501bp (37.8%) Frame: 1
Exosome
Match: gi|154281095|ref|XP_001541360.1| score: 162 e-value: 8e-38 Identity: 33.11% Span: 801bp (60.5%) Frame: 1
conserved
Match: gi|50427353|ref|XP_462289.1| score: 162 e-value: 6e-38 Identity: 40.38% Span: 636bp (48.0%) Frame: 1
hypothetical
Match: gi|46136891|ref|XP_390137.1| score: 161 e-value: 1e-37 Identity: 37.96% Span: 705bp (53.2%) Frame: 1
gi|46136891|ref|XP_390137.1| hypothetical protein FG09961.1 [Gibberella zeae PH-1] >gi|42544856|gb|EAA67699.1| hypoth...
Match: gi|169779940|ref|XP_001824434.1| score: 161 e-value: 1e-37 Identity: 34.22% Span: 789bp (59.5%) Frame: 1
hypothetical
Match: gi|116058063|emb|CAL54266.1| score: 161 e-value: 1e-37 Identity: 35.2% Span: 714bp (53.9%) Frame: 1
Exosomal 3'-5' exoribonuclease complex, subunit Rrp4 (ISS) [Ostreococcus tauri]
Match: gi|114627212|ref|XP_001165990.1| score: 160 e-value: 2e-37 Identity: 45.59% Span: 612bp (46.2%) Frame: 1
PREDICTED:
Match: gi|158287391|ref|XP_309432.3| score: 160 e-value: 2e-37 Identity: 43.56% Span: 606bp (45.7%) Frame: 1
AGAP011211-PA
Match: gi|159128032|gb|EDP53147.1| score: 159 e-value: 4e-37 Identity: 33.22% Span: 795bp (60.0%) Frame: 1
exosome
Match: gi|71000673|ref|XP_755018.1| score: 159 e-value: 4e-37 Identity: 33.22% Span: 795bp (60.0%) Frame: 1
exonuclease
Match: gi|154316807|ref|XP_001557724.1| score: 159 e-value: 5e-37 Identity: 33.92% Span: 804bp (60.7%) Frame: 1
hypothetical
Match: gi|67467767|ref|XP_649967.1| score: 159 e-value: 5e-37 Identity: 42.25% Span: 561bp (42.3%) Frame: 1
exosome
Match: gi|119493346|ref|XP_001263863.1| score: 159 e-value: 5e-37 Identity: 33.22% Span: 795bp (60.0%) Frame: 1
exosome
Match: gi|150865065|ref|XP_001384122.2| score: 157 e-value: 2e-36 Identity: 43.96% Span: 546bp (41.2%) Frame: 1
hypothetical
Match: gi|190348059|gb|EDK40445.2| score: 156 e-value: 3e-36 Identity: 41.54% Span: 585bp (44.2%) Frame: 1
hypothetical
Match: gi|146415688|ref|XP_001483814.1| score: 156 e-value: 3e-36 Identity: 41.54% Span: 585bp (44.2%) Frame: 1
hypothetical
Match: gi|68486193|ref|XP_709945.1| score: 155 e-value: 1e-35 Identity: 35.79% Span: 789bp (59.5%) Frame: 1
likely
Match: gi|167389163|ref|XP_001738843.1| score: 155 e-value: 8e-36 Identity: 33.95% Span: 801bp (60.5%) Frame: 1
rrp4,
Match: gi|212544972|ref|XP_002152640.1| score: 155 e-value: 1e-35 Identity: 32.68% Span: 810bp (61.1%) Frame: 1
exosome
Match: gi|115402927|ref|XP_001217540.1| score: 155 e-value: 1e-35 Identity: 32.9% Span: 810bp (61.1%) Frame: 1
conserved
Match: gi|149237360|ref|XP_001524557.1| score: 154 e-value: 1e-35 Identity: 44.2% Span: 543bp (41.0%) Frame: 1
exosome
Match: gi|164426690|ref|XP_957624.2| score: 154 e-value: 1e-35 Identity: 35.84% Span: 792bp (59.8%) Frame: 1
hypothetical
Match: gi|218714679|gb|EED14102.1| score: 154 e-value: 1e-35 Identity: 32.23% Span: 783bp (59.1%) Frame: 1
exosome

49 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 1 hits recorded
Match: At1G03360.1 score: 411 e-value: 5e-115 Identity: 65.62% Span: 948bp (71.5%) Frame: 1
Symbols: ATRRP4 | ATRRP4; exonuclease | chr1:824653-826179 FORWARD

swissprot [blastx] Showing best 8 hits recorded
Match: Q09704 score: 193 e-value: 2e-48 Identity: 48.73% Span: 591bp (44.6%) Frame: 1
Exosome complex component rrp4 OS=Schizosaccharomyces pombe GN=rrp4 PE=2 SV=1
Match: Q8VBV3 score: 177 e-value: 9e-44 Identity: 46.7% Span: 636bp (48.0%) Frame: 1
Exosome complex exonuclease RRP4 OS=Mus musculus GN=Exosc2 PE=2 SV=1
Match: Q2KID0 score: 175 e-value: 5e-43 Identity: 47.55% Span: 612bp (46.2%) Frame: 1
Exosome complex exonuclease RRP4 OS=Bos taurus GN=EXOSC2 PE=2 SV=1
Match: Q13868 score: 172 e-value: 3e-42 Identity: 47.06% Span: 612bp (46.2%) Frame: 1
Exosome complex exonuclease RRP4 OS=Homo sapiens GN=EXOSC2 PE=1 SV=2
Match: P38792 score: 171 e-value: 7e-42 Identity: 38.4% Span: 729bp (55.0%) Frame: 1
Exosome complex component RRP4 OS=Saccharomyces cerevisiae GN=RRP4 PE=1 SV=1
Match: Q5JIR5 score: 76.6 e-value: 3e-13 Identity: 27.18% Span: 597bp (45.1%) Frame: 1
Probable exosome complex RNA-binding protein 1 OS=Pyrococcus kodakaraensis GN=TK1635 PE=3 SV=1
Match: Q8PTT9 score: 68.6 e-value: 8e-11 Identity: 27.37% Span: 555bp (41.9%) Frame: 1
Probable exosome complex RNA-binding protein 1 OS=Methanosarcina mazei GN=MM_2622 PE=3 SV=1
Match: O26780 score: 68.6 e-value: 8e-11 Identity: 23.94% Span: 624bp (47.1%) Frame: 1
Probable exosome complex RNA-binding protein 1 OS=Methanobacterium thermoautotrophicum GN=MTH_684