| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|12230585|sp|Q08937|ROC2_NICSY |
score: 427 |
e-value: 1e-117 |
Identity: 98.97% |
Span: 873bp (66.0%) |
Frame: 3 |
| gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) gi|100294|pir||S20070 ribo... |
| Match: gi|1350821|sp|P49314|ROC2_NICPL |
score: 411 |
e-value: 5e-113 |
Identity: 96.23% |
Span: 873bp (66.0%) |
Frame: 3 |
| gi|1350821|sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) gi|280403|pir||S26204 RNA-... |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 304 |
e-value: 9e-81 |
Identity: 70.66% |
Span: 711bp (53.7%) |
Frame: 3 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 299 |
e-value: 4e-79 |
Identity: 69.83% |
Span: 711bp (53.7%) |
Frame: 3 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|17432522|gb|AAL39067.1|AF389431_1 |
score: 288 |
e-value: 5e-76 |
Identity: 67.32% |
Span: 711bp (53.7%) |
Frame: 3 |
| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|157347527|emb|CAO18164.1| |
score: 286 |
e-value: 2e-75 |
Identity: 65.25% |
Span: 705bp (53.3%) |
Frame: 3 |
| unnamed |
| Match: gi|15228102|ref|NP_181259.1| |
score: 268 |
e-value: 7e-70 |
Identity: 63.33% |
Span: 705bp (53.3%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|21617920|gb|AAM66970.1| |
score: 267 |
e-value: 2e-69 |
Identity: 63.33% |
Span: 705bp (53.3%) |
Frame: 3 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|115473531|ref|NP_001060364.1| |
score: 255 |
e-value: 5e-66 |
Identity: 59.09% |
Span: 660bp (49.9%) |
Frame: 3 |
| Os07g0631900 [Oryza sativa (japonica cultivar-group)] >gi22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A... |
| Match: gi|149392545|gb|ABR26075.1| |
score: 255 |
e-value: 6e-66 |
Identity: 59.09% |
Span: 660bp (49.9%) |
Frame: 3 |
| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|125559266|gb|EAZ04802.1| |
score: 255 |
e-value: 5e-66 |
Identity: 59.09% |
Span: 660bp (49.9%) |
Frame: 3 |
| hypothetical protein OsI_26976 [Oryza sativa Indica Group] |
| Match: gi|1015370|gb|AAA79045.1| |
score: 248 |
e-value: 1e-63 |
Identity: 59.92% |
Span: 699bp (52.8%) |
Frame: 3 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|681902|dbj|BAA06518.1| |
score: 246 |
e-value: 4e-63 |
Identity: 57.88% |
Span: 705bp (53.3%) |
Frame: 3 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|681904|dbj|BAA06519.1| |
score: 246 |
e-value: 4e-63 |
Identity: 57.88% |
Span: 705bp (53.3%) |
Frame: 3 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|125544079|gb|EAY90218.1| |
score: 245 |
e-value: 5e-63 |
Identity: 57.69% |
Span: 687bp (51.9%) |
Frame: 3 |
| hypothetical protein OsI_11785 [Oryza sativa Indica Group] |
| Match: gi|115453241|ref|NP_001050221.1| |
score: 245 |
e-value: 5e-63 |
Identity: 57.69% |
Span: 687bp (51.9%) |
Frame: 3 |
| Os03g0376600 [Oryza sativa (japonica cultivar-group)] >gi18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotei... |
| Match: gi|116786296|gb|ABK24055.1| |
score: 211 |
e-value: 1e-52 |
Identity: 52.31% |
Span: 648bp (49.0%) |
Frame: 3 |
| unknown |
| Match: gi|3550467|emb|CAA06469.1| |
score: 198 |
e-value: 9e-49 |
Identity: 49.37% |
Span: 708bp (53.5%) |
Frame: 3 |
| gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 197 |
e-value: 2e-48 |
Identity: 48.87% |
Span: 663bp (50.1%) |
Frame: 3 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|21309|emb|CAA41023.1| |
score: 196 |
e-value: 4e-48 |
Identity: 50.43% |
Span: 702bp (53.1%) |
Frame: 3 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 196 |
e-value: 4e-48 |
Identity: 50.43% |
Span: 702bp (53.1%) |
Frame: 3 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|115480705|ref|NP_001063946.1| |
score: 194 |
e-value: 1e-47 |
Identity: 49.78% |
Span: 666bp (50.3%) |
Frame: 3 |
| Os09g0565200 [Oryza sativa (japonica cultivar-group)] >gi52076131|dbj|BAD46644.1| putative nucleic acid-binding prote... |
| Match: gi|2443390|dbj|BAA22411.1| |
score: 194 |
e-value: 2e-47 |
Identity: 50.68% |
Span: 660bp (49.9%) |
Frame: 3 |
| gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|162463757|ref|NP_001105347.1| |
score: 194 |
e-value: 2e-47 |
Identity: 47.64% |
Span: 696bp (52.6%) |
Frame: 3 |
| nucleic acid binding protein1 [Zea mays] >gi168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays] >gi|1956373... |
| Match: gi|19032260|emb|CAD18921.1| |
score: 192 |
e-value: 4e-47 |
Identity: 49.77% |
Span: 642bp (48.5%) |
Frame: 3 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|2330647|emb|CAA74889.1| |
score: 192 |
e-value: 5e-47 |
Identity: 52.66% |
Span: 618bp (46.7%) |
Frame: 3 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|157345365|emb|CAO14663.1| |
score: 192 |
e-value: 4e-47 |
Identity: 49.11% |
Span: 669bp (50.6%) |
Frame: 3 |
| unnamed |
| Match: gi|681906|dbj|BAA06520.1| |
score: 191 |
e-value: 1e-46 |
Identity: 46% |
Span: 729bp (55.1%) |
Frame: 3 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 191 |
e-value: 1e-46 |
Identity: 49.3% |
Span: 642bp (48.5%) |
Frame: 3 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|681908|dbj|BAA06521.1| |
score: 191 |
e-value: 1e-46 |
Identity: 46% |
Span: 729bp (55.1%) |
Frame: 3 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|475719|gb|AAA18379.1| |
score: 190 |
e-value: 3e-46 |
Identity: 48.07% |
Span: 678bp (51.2%) |
Frame: 3 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|388621|gb|AAA33039.1| |
score: 190 |
e-value: 3e-46 |
Identity: 48.07% |
Span: 696bp (52.6%) |
Frame: 3 |
| RNA-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|510240|emb|CAA43420.1| |
score: 190 |
e-value: 3e-46 |
Identity: 48.07% |
Span: 678bp (51.2%) |
Frame: 3 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|15233980|ref|NP_194208.1| |
score: 190 |
e-value: 3e-46 |
Identity: 48.07% |
Span: 678bp (51.2%) |
Frame: 3 |
| gi|15233980|ref|NP_194208.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|116781814|gb|ABK22250.1| |
score: 189 |
e-value: 3e-46 |
Identity: 46.98% |
Span: 645bp (48.8%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|168274276|dbj|BAG09558.1| |
score: 189 |
e-value: 6e-46 |
Identity: 48.66% |
Span: 669bp (50.6%) |
Frame: 3 |
| chloroplast RNA binding protein [Mesembryanthemum crystallinum] |
| Match: gi|116793682|gb|ABK26841.1| |
score: 189 |
e-value: 3e-46 |
Identity: 46.98% |
Span: 645bp (48.8%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|149391365|gb|ABR25700.1| |
score: 189 |
e-value: 6e-46 |
Identity: 51.21% |
Span: 618bp (46.7%) |
Frame: 3 |
| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|15294254|gb|AAK95304.1|AF410318_1 |
score: 189 |
e-value: 3e-46 |
Identity: 48.28% |
Span: 675bp (51.0%) |
Frame: 3 |
| AT4g24770/F22K18_30 [Arabidopsis thaliana] >gi23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] |
| Match: gi|15240641|ref|NP_199836.1| |
score: 188 |
e-value: 7e-46 |
Identity: 48.7% |
Span: 687bp (51.9%) |
Frame: 3 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|157342097|emb|CAO64210.1| |
score: 187 |
e-value: 2e-45 |
Identity: 48.02% |
Span: 678bp (51.2%) |
Frame: 3 |
| unnamed |
| Match: gi|147838354|emb|CAN61133.1| |
score: 187 |
e-value: 2e-45 |
Identity: 48.02% |
Span: 678bp (51.2%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|115477771|ref|NP_001062481.1| |
score: 184 |
e-value: 1e-44 |
Identity: 46.96% |
Span: 687bp (51.9%) |
Frame: 3 |
| Os08g0557100 |
| Match: gi|125562527|gb|EAZ07975.1| |
score: 184 |
e-value: 1e-44 |
Identity: 46.96% |
Span: 687bp (51.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|19032262|emb|CAD18922.1| |
score: 183 |
e-value: 2e-44 |
Identity: 50% |
Span: 615bp (46.5%) |
Frame: 3 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|99029149|gb|ABF60862.1| |
score: 183 |
e-value: 3e-44 |
Identity: 50% |
Span: 627bp (47.4%) |
Frame: 3 |
| GRSF |
| Match: gi|168029395|ref|XP_001767211.1| |
score: 180 |
e-value: 3e-43 |
Identity: 49% |
Span: 600bp (45.4%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681466|gb|EDQ67892.1| predicted protein [Physcomitrella... |
| Match: gi|116787606|gb|ABK24573.1| |
score: 180 |
e-value: 3e-43 |
Identity: 49.27% |
Span: 612bp (46.3%) |
Frame: 3 |
| unknown |
| Match: gi|116788830|gb|ABK25016.1| |
score: 179 |
e-value: 3e-43 |
Identity: 46.82% |
Span: 657bp (49.7%) |
Frame: 3 |
| unknown |
| Match: gi|168033890|ref|XP_001769447.1| |
score: 177 |
e-value: 2e-42 |
Identity: 43.21% |
Span: 708bp (53.5%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162679367|gb|EDQ65816.1| predicted protein [Physcomitrella... |
| Match: gi|118486956|gb|ABK95311.1| |
score: 176 |
e-value: 4e-42 |
Identity: 47.2% |
Span: 627bp (47.4%) |
Frame: 3 |
| unknown |
| Match: gi|3550483|emb|CAA11893.1| |
score: 175 |
e-value: 8e-42 |
Identity: 46.38% |
Span: 621bp (46.9%) |
Frame: 3 |
| gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 171 |
e-value: 1e-40 |
Identity: 46.92% |
Span: 630bp (47.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|125564728|gb|EAZ10108.1| |
score: 171 |
e-value: 2e-40 |
Identity: 48.28% |
Span: 606bp (45.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|1054915|gb|AAA81023.1| |
score: 169 |
e-value: 6e-40 |
Identity: 46.48% |
Span: 624bp (47.2%) |
Frame: 3 |
| gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] |
| Match: gi|168054274|ref|XP_001779557.1| |
score: 164 |
e-value: 2e-38 |
Identity: 42.34% |
Span: 660bp (49.9%) |
Frame: 3 |
| predicted |
| Match: gi|168054234|ref|XP_001779537.1| |
score: 162 |
e-value: 7e-38 |
Identity: 44.5% |
Span: 600bp (45.4%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669018|gb|EDQ55613.1| predicted protein [Physcomitrella... |
| Match: gi|475720|gb|AAA18380.1| |
score: 162 |
e-value: 6e-38 |
Identity: 48.39% |
Span: 555bp (42.0%) |
Frame: 3 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|681912|dbj|BAA06523.1| |
score: 159 |
e-value: 5e-37 |
Identity: 39.46% |
Span: 660bp (49.9%) |
Frame: 3 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 158 |
e-value: 8e-37 |
Identity: 39.46% |
Span: 660bp (49.9%) |
Frame: 3 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|157336790|emb|CAO71475.1| |
score: 158 |
e-value: 8e-37 |
Identity: 41.71% |
Span: 597bp (45.1%) |
Frame: 3 |
| unnamed |
| Match: gi|17064758|gb|AAL32533.1| |
score: 158 |
e-value: 8e-37 |
Identity: 39.46% |
Span: 660bp (49.9%) |
Frame: 3 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|133249|sp|P19684|ROC5_NICSY |
score: 157 |
e-value: 2e-36 |
Identity: 38.53% |
Span: 645bp (48.8%) |
Frame: 3 |
| gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor gi|100390|pir||S12111 ribonucleoprotei... |
| Match: gi|115470657|ref|NP_001058927.1| |
score: 156 |
e-value: 4e-36 |
Identity: 42.5% |
Span: 600bp (45.4%) |
Frame: 3 |
| Os07g0158300 [Oryza sativa (japonica cultivar-group)] >gi34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza... |
| Match: gi|311952|emb|CAA41253.1| |
score: 155 |
e-value: 7e-36 |
Identity: 38.07% |
Span: 645bp (48.8%) |
Frame: 3 |
| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris] |
| Match: gi|118486835|gb|ABK95252.1| |
score: 154 |
e-value: 2e-35 |
Identity: 38.1% |
Span: 693bp (52.4%) |
Frame: 3 |
| unknown |
| Match: gi|3550485|emb|CAA11894.1| |
score: 150 |
e-value: 3e-34 |
Identity: 42.08% |
Span: 600bp (45.4%) |
Frame: 3 |
| cp33Hv [Hordeum vulgare subsp. vulgare] |
| Match: gi|125541605|gb|EAY88000.1| |
score: 150 |
e-value: 2e-34 |
Identity: 41.84% |
Span: 588bp (44.4%) |
Frame: 3 |
| hypothetical protein OsI_09422 [Oryza sativa Indica Group] |
| Match: gi|115449577|ref|NP_001048500.1| |
score: 150 |
e-value: 2e-34 |
Identity: 41.84% |
Span: 588bp (44.4%) |
Frame: 3 |
| Os02g0815200 [Oryza sativa (japonica cultivar-group)] >gi47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 p... |
| Match: gi|558629|emb|CAA57551.1| |
score: 148 |
e-value: 8e-34 |
Identity: 41.12% |
Span: 591bp (44.7%) |
Frame: 3 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|2104687|emb|CAA66479.1| |
score: 146 |
e-value: 3e-33 |
Identity: 39.59% |
Span: 591bp (44.7%) |
Frame: 3 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|157359111|emb|CAO67026.1| |
score: 145 |
e-value: 9e-33 |
Identity: 35.29% |
Span: 654bp (49.4%) |
Frame: 3 |
| unnamed |
| Match: gi|147769830|emb|CAN61277.1| |
score: 144 |
e-value: 2e-32 |
Identity: 34.84% |
Span: 654bp (49.4%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|88911212|gb|ABD58896.1| |
score: 143 |
e-value: 4e-32 |
Identity: 40.09% |
Span: 681bp (51.5%) |
Frame: 3 |
| chloroplast |
| Match: gi|15231817|ref|NP_190914.1| |
score: 143 |
e-value: 3e-32 |
Identity: 65.57% |
Span: 342bp (25.9%) |
Frame: 3 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|15231817|ref|NP_190914.1| |
score: 134 |
e-value: 2e-29 |
Identity: 72.22% |
Span: 270bp (20.4%) |
Frame: 3 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 88.2 |
e-value: 1e-15 |
Identity: 55% |
Span: 240bp (18.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|116786296|gb|ABK24055.1| |
score: 85.5 |
e-value: 9e-15 |
Identity: 41.11% |
Span: 270bp (20.4%) |
Frame: 3 |
| unknown |
| Match: gi|149391365|gb|ABR25700.1| |
score: 84 |
e-value: 3e-14 |
Identity: 48.84% |
Span: 255bp (19.3%) |
Frame: 3 |
| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|15231817|ref|NP_190914.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|681902|dbj|BAA06518.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|99029149|gb|ABF60862.1| |
score: 82.4 |
e-value: 7e-14 |
Identity: 48.81% |
Span: 249bp (18.8%) |
Frame: 3 |
| GRSF |
| Match: gi|3550483|emb|CAA11893.1| |
score: 82 |
e-value: 1e-13 |
Identity: 44.19% |
Span: 255bp (19.3%) |
Frame: 3 |
| gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] |
| Match: gi|88911212|gb|ABD58896.1| |
score: 79.7 |
e-value: 5e-13 |
Identity: 46.59% |
Span: 264bp (20.0%) |
Frame: 3 |
| chloroplast |
| Match: gi|116781814|gb|ABK22250.1| |
score: 79.7 |
e-value: 5e-13 |
Identity: 49.4% |
Span: 249bp (18.8%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|116793682|gb|ABK26841.1| |
score: 79.7 |
e-value: 5e-13 |
Identity: 49.4% |
Span: 249bp (18.8%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|157336790|emb|CAO71475.1| |
score: 78.2 |
e-value: 1e-12 |
Identity: 51.32% |
Span: 228bp (17.2%) |
Frame: 3 |
| unnamed |
| Match: gi|168029395|ref|XP_001767211.1| |
score: 77.8 |
e-value: 2e-12 |
Identity: 53.09% |
Span: 240bp (18.1%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681466|gb|EDQ67892.1| predicted protein [Physcomitrella... |
| Match: gi|15231817|ref|NP_190914.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 48.72% |
Span: 234bp (17.7%) |
Frame: 3 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|19032262|emb|CAD18922.1| |
score: 77 |
e-value: 3e-12 |
Identity: 45.57% |
Span: 237bp (17.9%) |
Frame: 3 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|475720|gb|AAA18380.1| |
score: 76.6 |
e-value: 4e-12 |
Identity: 48.78% |
Span: 243bp (18.4%) |
Frame: 3 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|125564728|gb|EAZ10108.1| |
score: 76.6 |
e-value: 4e-12 |
Identity: 53.52% |
Span: 213bp (16.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|558629|emb|CAA57551.1| |
score: 76.3 |
e-value: 5e-12 |
Identity: 47.31% |
Span: 261bp (19.7%) |
Frame: 3 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|115480705|ref|NP_001063946.1| |
score: 75.5 |
e-value: 9e-12 |
Identity: 43.33% |
Span: 252bp (19.0%) |
Frame: 3 |
| Os09g0565200 [Oryza sativa (japonica cultivar-group)] >gi52076131|dbj|BAD46644.1| putative nucleic acid-binding prote... |
| Match: gi|125564728|gb|EAZ10108.1| |
score: 75.5 |
e-value: 9e-12 |
Identity: 43.33% |
Span: 252bp (19.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|149391365|gb|ABR25700.1| |
score: 75.5 |
e-value: 9e-12 |
Identity: 43.33% |
Span: 252bp (19.0%) |
Frame: 3 |
| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 75.5 |
e-value: 9e-12 |
Identity: 43.33% |
Span: 252bp (19.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|15240641|ref|NP_199836.1| |
score: 72.8 |
e-value: 6e-11 |
Identity: 41.86% |
Span: 249bp (18.8%) |
Frame: 3 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|168054234|ref|XP_001779537.1| |
score: 72.8 |
e-value: 6e-11 |
Identity: 43.9% |
Span: 246bp (18.6%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669018|gb|EDQ55613.1| predicted protein [Physcomitrella... |
|
| 187 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 62 hits recorded |
| Match: At2G37220.1 |
score: 268 |
e-value: 6e-72 |
Identity: 63.33% |
Span: 705bp (53.3%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G53460.2 |
score: 246 |
e-value: 3e-65 |
Identity: 57.88% |
Span: 705bp (53.3%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G24770.1 |
score: 190 |
e-value: 2e-48 |
Identity: 48.07% |
Span: 678bp (51.2%) |
Frame: 3 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At5G50250.1 |
score: 188 |
e-value: 6e-48 |
Identity: 48.7% |
Span: 687bp (51.9%) |
Frame: 3 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At3G52380.1 |
score: 158 |
e-value: 6e-39 |
Identity: 39.46% |
Span: 660bp (49.9%) |
Frame: 3 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At3G53460.1 |
score: 143 |
e-value: 2e-34 |
Identity: 65.57% |
Span: 342bp (25.9%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At1G60000.1 |
score: 141 |
e-value: 1e-33 |
Identity: 37.04% |
Span: 648bp (49.0%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At3G53460.1 |
score: 134 |
e-value: 2e-31 |
Identity: 72.22% |
Span: 270bp (20.4%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G52150.2 |
score: 122 |
e-value: 6e-28 |
Identity: 35.15% |
Span: 699bp (52.8%) |
Frame: 3 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.1 |
score: 122 |
e-value: 6e-28 |
Identity: 35.15% |
Span: 699bp (52.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At2G21660.2 |
score: 98.2 |
e-value: 1e-20 |
Identity: 51.76% |
Span: 255bp (19.3%) |
Frame: 3 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
| Match: At2G21660.1 |
score: 98.2 |
e-value: 1e-20 |
Identity: 51.76% |
Span: 255bp (19.3%) |
Frame: 3 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
| Match: At3G23830.2 |
score: 92 |
e-value: 7e-19 |
Identity: 49.44% |
Span: 258bp (19.5%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At4G13850.2 |
score: 92 |
e-value: 7e-19 |
Identity: 48.78% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.4 |
score: 92 |
e-value: 7e-19 |
Identity: 48.78% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.3 |
score: 92 |
e-value: 7e-19 |
Identity: 48.78% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.1 |
score: 92 |
e-value: 7e-19 |
Identity: 48.78% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At3G23830.1 |
score: 92 |
e-value: 7e-19 |
Identity: 49.44% |
Span: 258bp (19.5%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At4G39260.1 |
score: 90.5 |
e-value: 2e-18 |
Identity: 50.63% |
Span: 237bp (17.9%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G39260.2 |
score: 90.5 |
e-value: 2e-18 |
Identity: 50.63% |
Span: 237bp (17.9%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G39260.3 |
score: 90.5 |
e-value: 2e-18 |
Identity: 50.63% |
Span: 237bp (17.9%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G74230.1 |
score: 89.7 |
e-value: 4e-18 |
Identity: 51.22% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At3G26420.1 |
score: 87.8 |
e-value: 1e-17 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At5G61030.1 |
score: 87 |
e-value: 2e-17 |
Identity: 45.12% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G53460.1 |
score: 83.6 |
e-value: 3e-16 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.2 |
score: 83.6 |
e-value: 3e-16 |
Identity: 46.99% |
Span: 249bp (18.8%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G08000.1 |
score: 82.8 |
e-value: 4e-16 |
Identity: 43.68% |
Span: 261bp (19.7%) |
Frame: 3 |
| RNA-binding protein, putative | chr3:2555040-2555835 REVERSE |
| Match: At2G18510.1 |
score: 81.3 |
e-value: 1e-15 |
Identity: 28.43% |
Span: 609bp (46.0%) |
Frame: 3 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At4G14300.1 |
score: 80.5 |
e-value: 2e-15 |
Identity: 30.05% |
Span: 600bp (45.4%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At4G13860.1 |
score: 78.2 |
e-value: 1e-14 |
Identity: 54.67% |
Span: 225bp (17.0%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At3G53460.1 |
score: 77.4 |
e-value: 2e-14 |
Identity: 48.72% |
Span: 234bp (17.7%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G39260.4 |
score: 76.3 |
e-value: 4e-14 |
Identity: 50.79% |
Span: 189bp (14.3%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G18630.1 |
score: 74.3 |
e-value: 2e-13 |
Identity: 48.72% |
Span: 234bp (17.7%) |
Frame: 3 |
| Symbols: GR-RBP6 | GR-RBP6 (glycine-rich RNA-binding protein 6); RNA binding | chr1:6415218-6416275 FORWARD |
| Match: At3G13224.2 |
score: 73.9 |
e-value: 2e-13 |
Identity: 24.5% |
Span: 597bp (45.1%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At1G49760.1 |
score: 73.6 |
e-value: 3e-13 |
Identity: 28.71% |
Span: 606bp (45.8%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G47320.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 41.46% |
Span: 246bp (18.6%) |
Frame: 3 |
| Symbols: RPS19 | RPS19 (40S ribosomal protein S19); RNA binding | chr5:19221028-19222178 FORWARD |
| Match: At5G50250.1 |
score: 72.8 |
e-value: 4e-13 |
Identity: 41.86% |
Span: 249bp (18.8%) |
Frame: 3 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At5G54900.1 |
score: 72 |
e-value: 8e-13 |
Identity: 28.43% |
Span: 588bp (44.4%) |
Frame: 3 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At1G11650.2 |
score: 71.2 |
e-value: 1e-12 |
Identity: 28.44% |
Span: 621bp (46.9%) |
Frame: 3 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At3G19130.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 29.95% |
Span: 588bp (44.4%) |
Frame: 3 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At5G06210.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 41.98% |
Span: 243bp (18.4%) |
Frame: 3 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G55550.1 |
score: 69.7 |
e-value: 4e-12 |
Identity: 25.51% |
Span: 588bp (44.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At3G13224.1 |
score: 69.7 |
e-value: 4e-12 |
Identity: 25.13% |
Span: 558bp (42.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At5G55550.3 |
score: 69.7 |
e-value: 4e-12 |
Identity: 25.51% |
Span: 588bp (44.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.2 |
score: 69.7 |
e-value: 4e-12 |
Identity: 25.51% |
Span: 588bp (44.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At1G60650.1 |
score: 69.3 |
e-value: 5e-12 |
Identity: 36.25% |
Span: 240bp (18.1%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At3G52150.2 |
score: 69.3 |
e-value: 5e-12 |
Identity: 40.48% |
Span: 252bp (19.0%) |
Frame: 3 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At1G60650.2 |
score: 69.3 |
e-value: 5e-12 |
Identity: 36.25% |
Span: 240bp (18.1%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At3G52150.1 |
score: 69.3 |
e-value: 5e-12 |
Identity: 40.48% |
Span: 252bp (19.0%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At5G04280.1 |
score: 69.3 |
e-value: 5e-12 |
Identity: 38.75% |
Span: 240bp (18.1%) |
Frame: 3 |
| glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD |
| Match: At3G14100.1 |
score: 68.2 |
e-value: 1e-11 |
Identity: 28.06% |
Span: 585bp (44.2%) |
Frame: 3 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At5G61030.1 |
score: 67.8 |
e-value: 1e-11 |
Identity: 35.71% |
Span: 321bp (24.3%) |
Frame: 3 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At5G19960.1 |
score: 67.4 |
e-value: 2e-11 |
Identity: 37.5% |
Span: 264bp (20.0%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:6744031-6746135 FORWARD |
| Match: At2G37510.1 |
score: 66.6 |
e-value: 3e-11 |
Identity: 44.19% |
Span: 255bp (19.3%) |
Frame: 3 |
| RNA-binding protein, putative | chr2:15750190-15751582 REVERSE |
| Match: At1G60000.1 |
score: 66.6 |
e-value: 3e-11 |
Identity: 36.05% |
Span: 255bp (19.3%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At1G17370.1 |
score: 66.2 |
e-value: 4e-11 |
Identity: 28.06% |
Span: 585bp (44.2%) |
Frame: 3 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At4G13850.1 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At3G23830.1 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At4G13850.2 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.4 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
| Match: At3G23830.2 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At4G13850.3 |
score: 65.5 |
e-value: 7e-11 |
Identity: 45.95% |
Span: 222bp (16.8%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
|
