| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225463376|ref|XP_002271571.1| |
score: 434 |
e-value: 1e-119 |
Identity: 57.76% |
Span: 1272bp (98.0%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270243872|emb|CBI30811.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224116700|ref|XP_002331856.1| |
score: 424 |
e-value: 2e-116 |
Identity: 57.21% |
Span: 1227bp (94.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222875374|gb|EEF12505.1| predicted protein [Populus trichocarpa] |
| Match: gi|255557441|ref|XP_002519751.1| |
score: 408 |
e-value: 7e-112 |
Identity: 55.53% |
Span: 1227bp (94.5%) |
Frame: 1 |
| conserved hypothetical protein [Ricinus communis] >gi223541168|gb|EEF42724.1| conserved hypothetical protein [Ricinus... |
| Match: gi|84468326|dbj|BAE71246.1| |
score: 375 |
e-value: 8e-102 |
Identity: 50.34% |
Span: 1275bp (98.2%) |
Frame: 1 |
| hypothetical protein [Trifolium pratense] |
| Match: gi|42568351|ref|NP_568663.2| |
score: 369 |
e-value: 6e-100 |
Identity: 51.42% |
Span: 1221bp (94.1%) |
Frame: 1 |
| 16S rRNA processing protein RimM family [Arabidopsis thaliana] >gi10177579|dbj|BAB10810.1| unnamed protein product [A... |
| Match: gi|125553343|gb|EAY99052.1| |
score: 282 |
e-value: 6e-74 |
Identity: 42.12% |
Span: 1227bp (94.5%) |
Frame: 1 |
| hypothetical protein OsI_21009 [Oryza sativa Indica Group] |
| Match: gi|222632582|gb|EEE64714.1| |
score: 280 |
e-value: 2e-73 |
Identity: 42.12% |
Span: 1227bp (94.5%) |
Frame: 1 |
| hypothetical protein OsJ_19570 [Oryza sativa Japonica Group] |
| Match: gi|238011556|gb|ACR36813.1| |
score: 264 |
e-value: 2e-68 |
Identity: 40.38% |
Span: 1227bp (94.5%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|242088857|ref|XP_002440261.1| |
score: 263 |
e-value: 3e-68 |
Identity: 39.43% |
Span: 1227bp (94.5%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_09g028680 [Sorghum bicolor] >gi241945546|gb|EES18691.1| hypothetical protein SORBIDRA... |
| Match: gi|15292693|gb|AAK92715.1| |
score: 167 |
e-value: 3e-39 |
Identity: 43.15% |
Span: 702bp (54.1%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi20465803|gb|AAM20390.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|224033115|gb|ACN35633.1| |
score: 166 |
e-value: 4e-39 |
Identity: 37.38% |
Span: 867bp (66.8%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|115465483|ref|NP_001056341.1| |
score: 155 |
e-value: 1e-35 |
Identity: 56.21% |
Span: 456bp (35.1%) |
Frame: 1 |
| Os05g0566300 [Oryza sativa (japonica cultivar-group)] >gi51854276|gb|AAU10657.1| unknown protein [Oryza sativa Japoni... |
| Match: gi|168032186|ref|XP_001768600.1| |
score: 103 |
e-value: 6e-20 |
Identity: 41.55% |
Span: 423bp (32.6%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162680099|gb|EDQ66538.1| predicted protein [Physcomitrella... |
| Match: gi|88808142|ref|ZP_01123653.1| |
score: 88.6 |
e-value: 2e-15 |
Identity: 39.86% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. WH 7805] >gi88788181|gb|EAR19337.1| 16S rRNA-processing protein [Synec... |
| Match: gi|113953430|ref|YP_729432.1| |
score: 87.4 |
e-value: 3e-15 |
Identity: 38.41% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. CC9311] >gi123132772|sp|Q0IDP0.1|RIMM_SYNS3 RecName: Full=Ribosome mat... |
| Match: gi|33864685|ref|NP_896244.1| |
score: 86.7 |
e-value: 6e-15 |
Identity: 39.86% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. WH 8102] >gi46397680|sp|Q7U9V4.1|RIMM_SYNPX RecName: Full=Ribosome mat... |
| Match: gi|116074427|ref|ZP_01471689.1| |
score: 86.3 |
e-value: 8e-15 |
Identity: 36.96% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. RS9916] >gi116069732|gb|EAU75484.1| 16S rRNA-processing protein [Synec... |
| Match: gi|148238537|ref|YP_001223924.1| |
score: 83.2 |
e-value: 6e-14 |
Identity: 39.86% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. WH 7803] >gi166226485|sp|A5GI62.1|RIMM_SYNPW RecName: Full=Ribosome ma... |
| Match: gi|119486516|ref|ZP_01620574.1| |
score: 83.2 |
e-value: 6e-14 |
Identity: 39.19% |
Span: 408bp (31.4%) |
Frame: 1 |
| 16S rRNA-processing protein [Lyngbya sp. PCC 8106] >gi119456418|gb|EAW37549.1| 16S rRNA-processing protein [Lyngbya s... |
| Match: gi|87123200|ref|ZP_01079051.1| |
score: 80.9 |
e-value: 3e-13 |
Identity: 37.68% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA processing protein RimM [Synechococcus sp. RS9917] >gi86168920|gb|EAQ70176.1| 16S rRNA processing protein Ri... |
| Match: gi|78211682|ref|YP_380461.1| |
score: 80.1 |
e-value: 5e-13 |
Identity: 37.68% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. CC9605] >gi109893063|sp|Q3ANC6.1|RIMM_SYNSC RecName: Full=Ribosome mat... |
| Match: gi|260435475|ref|ZP_05789445.1| |
score: 79.7 |
e-value: 7e-13 |
Identity: 37.68% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA processing protein RimM [Synechococcus sp. WH 8109] >gi260413349|gb|EEX06645.1| 16S rRNA processing protein ... |
| Match: gi|78183760|ref|YP_376194.1| |
score: 78.6 |
e-value: 2e-12 |
Identity: 34.78% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein RimM [Synechococcus sp. CC9902] >gi109893062|sp|Q3B0H7.1|RIMM_SYNS9 RecName: Full=Ribosom... |
| Match: gi|116071641|ref|ZP_01468909.1| |
score: 77 |
e-value: 5e-12 |
Identity: 34.78% |
Span: 411bp (31.7%) |
Frame: 1 |
| 16S rRNA-processing protein [Synechococcus sp. BL107] >gi116065264|gb|EAU71022.1| 16S rRNA-processing protein [Synech... |
| Match: gi|255077074|ref|XP_002502189.1| |
score: 76.6 |
e-value: 6e-12 |
Identity: 30.67% |
Span: 423bp (32.6%) |
Frame: 1 |
| predicted protein [Micromonas sp. RCC299] >gi226517454|gb|ACO63447.1| predicted protein [Micromonas sp. RCC299] |
|
| 13 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G46420.1 |
score: 369 |
e-value: 3e-102 |
Identity: 51.42% |
Span: 1221bp (94.1%) |
Frame: 1 |
| 16S rRNA processing protein RimM family | chr5:18847226-18850120 FORWARD |
|
| swissprot [blastx] | Showing best 21 hits recorded |
| Match: Q0IDP0 |
score: 87.4 |
e-value: 2e-16 |
Identity: 38.41% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain CC9311) GN=rimM PE=3 SV=1 |
| Match: Q7U9V4 |
score: 86.7 |
e-value: 3e-16 |
Identity: 39.86% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain WH8102) GN=rimM PE=3 SV=1 |
| Match: A5GI62 |
score: 83.2 |
e-value: 4e-15 |
Identity: 39.86% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain WH7803) GN=rimM PE=3 SV=1 |
| Match: Q3ANC6 |
score: 80.1 |
e-value: 3e-14 |
Identity: 37.68% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain CC9605) GN=rimM PE=3 SV=1 |
| Match: Q3B0H7 |
score: 78.6 |
e-value: 9e-14 |
Identity: 34.78% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain CC9902) GN=rimM PE=3 SV=1 |
| Match: B2J3X9 |
score: 76.6 |
e-value: 4e-13 |
Identity: 34.62% |
Span: 390bp (30.0%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rimM PE=3 SV=1 |
| Match: A2CCX2 |
score: 76.3 |
e-value: 5e-13 |
Identity: 36.23% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Prochlorococcus marinus (strain MIT 9303) GN=rimM PE=3 SV=2 |
| Match: Q7V4K0 |
score: 75.9 |
e-value: 6e-13 |
Identity: 36.23% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Prochlorococcus marinus (strain MIT 9313) GN=rimM PE=3 SV=2 |
| Match: A5GQ79 |
score: 75.1 |
e-value: 1e-12 |
Identity: 34.31% |
Span: 408bp (31.4%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain RCC307) GN=rimM PE=3 SV=1 |
| Match: Q049R7 |
score: 74.3 |
e-value: 2e-12 |
Identity: 32.81% |
Span: 384bp (29.6%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rimM PE=3 SV=1 |
| Match: Q1G9L3 |
score: 74.3 |
e-value: 2e-12 |
Identity: 32.81% |
Span: 384bp (29.6%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rim... |
| Match: Q7V9R4 |
score: 73.2 |
e-value: 4e-12 |
Identity: 33.33% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Prochlorococcus marinus GN=rimM PE=3 SV=1 |
| Match: B0CFM3 |
score: 72.8 |
e-value: 5e-12 |
Identity: 30.71% |
Span: 381bp (29.4%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Acaryochloris marina (strain MBIC 11017) GN=rimM PE=3 SV=1 |
| Match: Q5N0Z1 |
score: 72.4 |
e-value: 7e-12 |
Identity: 36.96% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rimM PE=3 SV=1 |
| Match: Q31KY0 |
score: 72.4 |
e-value: 7e-12 |
Identity: 36.96% |
Span: 411bp (31.7%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Synechococcus elongatus (strain PCC 7942) GN=rimM PE=3 SV=1 |
| Match: Q3ME71 |
score: 72.4 |
e-value: 7e-12 |
Identity: 35.66% |
Span: 387bp (29.8%) |
Frame: 1 |
| Probable 16S rRNA-processing protein rimM OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rimM PE=3 SV=1 |
| Match: Q8YTB1 |
score: 70.9 |
e-value: 2e-11 |
Identity: 34.88% |
Span: 387bp (29.8%) |
Frame: 1 |
| Probable 16S rRNA-processing protein rimM OS=Anabaena sp. (strain PCC 7120) GN=rimM PE=3 SV=1 |
| Match: A8YVT3 |
score: 70.1 |
e-value: 3e-11 |
Identity: 32.81% |
Span: 384bp (29.6%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Lactobacillus helveticus (strain DPC 4571) GN=rimM PE=3 SV=1 |
| Match: B7K5W1 |
score: 70.1 |
e-value: 3e-11 |
Identity: 34.53% |
Span: 414bp (31.9%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Cyanothece sp. (strain PCC 8801) GN=rimM PE=3 SV=1 |
| Match: Q74IQ5 |
score: 68.9 |
e-value: 7e-11 |
Identity: 30.3% |
Span: 396bp (30.5%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Lactobacillus johnsonii GN=rimM PE=3 SV=1 |
| Match: Q044E4 |
score: 68.9 |
e-value: 7e-11 |
Identity: 30.3% |
Span: 396bp (30.5%) |
Frame: 1 |
| Ribosome maturation factor rimM OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rimM PE=3 SV=1 |
|
