| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|42565781|ref|NP_190512.3| |
score: 283.1 |
e-value: 7.5e-75 |
Identity: 78.39% |
Span: 576bp (45.0%) |
Frame: 2 |
| SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi... |
| Match: gi|12324445|gb|AAG52185.1| |
score: 283.1 |
e-value: 7.5e-75 |
Identity: 78.39% |
Span: 576bp (45.0%) |
Frame: 2 |
| gi|12324445|gb|AAG52185.1| putative splicing factor; 53460-55514 [Arabidopsis thaliana] |
| Match: gi|33146854|dbj|BAC79849.1| |
score: 251.9 |
e-value: 1.9e-65 |
Identity: 69.07% |
Span: 582bp (45.5%) |
Frame: 2 |
| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group] |
| Match: gi|11346384|pir||T46221 |
score: 248.1 |
e-value: 2.7e-64 |
Identity: 71.86% |
Span: 576bp (45.0%) |
Frame: 2 |
| gi|11346384|pir||T46221 PRE-MRNA SPLICING FACTOR SF2-like protein - Arabidopsis thaliana gi|6561944|emb|CAB62448.1| P... |
| Match: gi|4775271|emb|CAB42558.1| |
score: 241.9 |
e-value: 1.9e-62 |
Identity: 64.06% |
Span: 576bp (45.0%) |
Frame: 2 |
| gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis thaliana] |
| Match: gi|25386570|pir||E86223 |
score: 241.9 |
e-value: 1.9e-62 |
Identity: 64.06% |
Span: 576bp (45.0%) |
Frame: 2 |
| gi|25386570|pir||E86223 hypothetical protein [imported] - Arabidopsis thaliana gi|3249109|gb|AAC24092.1| Contains sim... |
| Match: gi|42561847|ref|NP_172386.3| |
score: 241.9 |
e-value: 1.9e-62 |
Identity: 64.06% |
Span: 576bp (45.0%) |
Frame: 2 |
| SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775270|emb|CAB42557.1| SF2/ASF-like splicing modul... |
| Match: gi|2443473|gb|AAB71386.1| |
score: 231.9 |
e-value: 2e-59 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|30678395|ref|NP_850934.1| |
score: 231.9 |
e-value: 2e-59 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|30678391|ref|NP_850933.1| |
score: 231.9 |
e-value: 2e-59 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|30678391|ref|NP_850933.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|30678398|ref|NP_563... |
| Match: gi|5815237|gb|AAD52611.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 64.32% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|5815235|gb|AAD52609.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 64.32% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 64.32% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|5815238|gb|AAD52612.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 64.32% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
| Match: gi|34894608|ref|NP_908629.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 71.28% |
Span: 564bp (44.1%) |
Frame: 2 |
| gi|34894608|ref|NP_908629.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] gi|201614... |
| Match: gi|5815239|gb|AAD52613.1| |
score: 230.3 |
e-value: 5.8e-59 |
Identity: 64.32% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|30679143|ref|NP_567235.3| |
score: 223.4 |
e-value: 7.1e-57 |
Identity: 65.82% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|2129717|pir||S71185 |
score: 221.9 |
e-value: 2.1e-56 |
Identity: 62.05% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|2129717|pir||S71185 splicing factor SF-2 homolog - Arabidopsis thaliana gi|166844|gb|AAA32856.1| ribonucleoprotein... |
| Match: gi|30679138|ref|NP_849537.1| |
score: 202.6 |
e-value: 1.3e-50 |
Identity: 66.48% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|7484802|pir||T01307 |
score: 201.4 |
e-value: 2.9e-50 |
Identity: 66.29% |
Span: 510bp (39.9%) |
Frame: 2 |
| gi|7484802|pir||T01307 alternative splicing factor ASF-2 homolog T14P8.21 - Arabidopsis thaliana gi|3193304|gb|AAC192... |
| Match: gi|11527011|gb|AAG36874.1| |
score: 175.6 |
e-value: 1.7e-42 |
Identity: 55.61% |
Span: 564bp (44.1%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 175.3 |
e-value: 2.2e-42 |
Identity: 55.1% |
Span: 564bp (44.1%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|45433540|ref|NP_956887.2| |
score: 167.5 |
e-value: 4.6e-40 |
Identity: 56.04% |
Span: 543bp (42.5%) |
Frame: 2 |
| gi|45433540|ref|NP_956887.2| hypothetical protein MGC65898 [Danio rerio] >gi|44890669|gb|AAH66682.1| Hypothetical pro... |
| Match: gi|47086241|ref|NP_998064.1| |
score: 166.8 |
e-value: 7.9e-40 |
Identity: 51.08% |
Span: 555bp (43.4%) |
Frame: 2 |
| gi|47086241|ref|NP_998064.1| hypothetical protein zgc:77449 [Danio rerio] >gi|45501375|gb|AAH67134.1| Hypothetical pr... |
| Match: gi|27666032|ref|XP_213798.1| |
score: 166 |
e-value: 1.3e-39 |
Identity: 49.46% |
Span: 555bp (43.4%) |
Frame: 2 |
| gi|27666032|ref|XP_213798.1| similar to Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor SRp30C) [Ra... |
| Match: gi|13385016|ref|NP_079849.1| |
score: 164.9 |
e-value: 3e-39 |
Identity: 50.28% |
Span: 540bp (42.2%) |
Frame: 2 |
| gi|13385016|ref|NP_079849.1| splicing factor, arginine/serine rich 9; splicing factor, arginine/serine rich 9 (25 kDa... |
| Match: gi|47227796|emb|CAG08959.1| |
score: 164.5 |
e-value: 3.9e-39 |
Identity: 54.95% |
Span: 543bp (42.5%) |
Frame: 2 |
| gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|34785174|gb|AAH56752.1| |
score: 164.5 |
e-value: 3.9e-39 |
Identity: 56.73% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|34785174|gb|AAH56752.1| Unknown (protein for MGC:65898) [Danio rerio] |
| Match: gi|31211005|ref|XP_314469.1| |
score: 163.7 |
e-value: 6.7e-39 |
Identity: 51.03% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|31211005|ref|XP_314469.1| ENSANGP00000020592 [Anopheles gambiae] gi|21297744|gb|EAA09889.1| ENSANGP00000020592 [An... |
| Match: gi|4506903|ref|NP_003760.1| |
score: 163.7 |
e-value: 6.7e-39 |
Identity: 50.28% |
Span: 540bp (42.2%) |
Frame: 2 |
| gi|4506903|ref|NP_003760.1| splicing factor, arginine/serine-rich 9 [Homo sapiens] gi|3929377|sp|Q13242|SFR9_HUMAN Sp... |
| Match: gi|5902076|ref|NP_008855.1| |
score: 163.7 |
e-value: 6.7e-39 |
Identity: 54.95% |
Span: 543bp (42.5%) |
Frame: 2 |
| gi|5902076|ref|NP_008855.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [H... |
| Match: gi|21358097|ref|NP_652611.1| |
score: 163.3 |
e-value: 8.7e-39 |
Identity: 50.26% |
Span: 579bp (45.3%) |
Frame: 2 |
| gi|21358097|ref|NP_652611.1| CG6987-PA [Drosophila melanogaster] gi|7243684|gb|AAF43413.1| SR family splicing factor ... |
| Match: gi|47087630|ref|NP_998180.1| |
score: 163.3 |
e-value: 8.7e-39 |
Identity: 57.37% |
Span: 543bp (42.5%) |
Frame: 2 |
| gi|47087630|ref|NP_998180.1| zgc:66146 [Danio rerio] >gi|33416587|gb|AAH55511.1| Zgc:66146 [Danio rerio] |
| Match: gi|27503247|gb|AAH42354.1| |
score: 163.3 |
e-value: 8.7e-39 |
Identity: 55.9% |
Span: 543bp (42.5%) |
Frame: 2 |
| gi|27503247|gb|AAH42354.1| Similar to splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing ... |
| Match: gi|284701|pir||S26404 |
score: 160.6 |
e-value: 5.6e-38 |
Identity: 55.56% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|284701|pir||S26404 alternative splicing factor ASF - mouse gi|26347437|dbj|BAC37367.1| unnamed protein product [Mu... |
| Match: gi|105295|pir||C40040 |
score: 160.6 |
e-value: 5.6e-38 |
Identity: 55.56% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|105295|pir||C40040 alternative splicing factor ASF-3 - human |
| Match: gi|105294|pir||B40040 |
score: 160.6 |
e-value: 5.6e-38 |
Identity: 55.56% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|105294|pir||B40040 alternative splicing factor ASF-2 - human gi|179074|gb|AAA35564.1| alternative |
| Match: gi|26383576|dbj|BAC25546.1| |
score: 160.6 |
e-value: 5.6e-38 |
Identity: 54.19% |
Span: 534bp (41.8%) |
Frame: 2 |
| gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus] |
| Match: gi|39583259|emb|CAE60051.1| |
score: 153.7 |
e-value: 6.9e-36 |
Identity: 48.15% |
Span: 564bp (44.1%) |
Frame: 2 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|34872980|ref|XP_213421.2| |
score: 149.8 |
e-value: 1e-34 |
Identity: 50.53% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|34872980|ref|XP_213421.2| similar to vascular endothelial zinc finger 1 [Rattus norvegicus] |
| Match: gi|39582979|emb|CAE73044.1| |
score: 147.1 |
e-value: 6.5e-34 |
Identity: 46.74% |
Span: 531bp (41.5%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|21954085|gb|AAK93589.2| |
score: 146 |
e-value: 1.4e-33 |
Identity: 64.12% |
Span: 393bp (30.7%) |
Frame: 2 |
| gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis thaliana] |
| Match: gi|12860555|dbj|BAB31986.1| |
score: 141.4 |
e-value: 3.5e-32 |
Identity: 49.09% |
Span: 492bp (38.5%) |
Frame: 2 |
| gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus] |
| Match: gi|23508020|ref|NP_700690.1| |
score: 117.5 |
e-value: 5.5e-25 |
Identity: 41.24% |
Span: 567bp (44.3%) |
Frame: 2 |
| gi|23508020|ref|NP_700690.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7] gi|23495082|gb|AAN35414.1... |
| Match: gi|23487306|gb|EAA21016.1| |
score: 111.3 |
e-value: 3.9e-23 |
Identity: 37.95% |
Span: 573bp (44.8%) |
Frame: 2 |
| gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii] |
| Match: gi|23479337|gb|EAA16195.1| |
score: 103.6 |
e-value: 8.2e-21 |
Identity: 38.01% |
Span: 513bp (40.1%) |
Frame: 2 |
| gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii] |
| Match: gi|30584231|gb|AAP36364.1| |
score: 98.21 |
e-value: 3.4e-19 |
Identity: 36.99% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|20127499|ref|NP_006266.2| |
score: 98.21 |
e-value: 3.4e-19 |
Identity: 36.99% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|28461393|gb|AAH46895.1| |
score: 98.21 |
e-value: 3.4e-19 |
Identity: 40.59% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28461393|gb|AAH46895.1| Similar to splicing factor, arginine/serine-rich 4 (SRp75) [Danio rerio] |
| Match: gi|26449170|dbj|BAC36925.1| |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus] |
| Match: gi|30585347|gb|AAP36946.1| |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|21361282|ref|NP_005617.2| |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|1082713|pir||A48133 |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|1082713|pir||A48133 pre-mRNA splicing SRp75 - human gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|20978758|sp|Q8VE97|SFR4_MOUSE |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|20978758|sp|Q8VE97|SFR4_MOUSE Splicing factor, arginine/serine-rich 4 gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mu... |
| Match: gi|2914669|gb|AAC04476.1| |
score: 96.67 |
e-value: 1e-18 |
Identity: 39.29% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens] |
| Match: gi|2136195|pir||S59043 |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 36.42% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|2136195|pir||S59043 spliling factor SRp55 - human gi|1049088|gb|AAA93073.1| SRp55-1 |
| Match: gi|23613195|ref|NP_703517.1| |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 43.26% |
Span: 423bp (33.1%) |
Frame: 2 |
| gi|23613195|ref|NP_703517.1| splicing factor, putative [Plasmodium falciparum 3D7] gi|23504659|emb|CAD51537.1| splici... |
| Match: gi|48140888|ref|XP_393525.1| |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 62.34% |
Span: 228bp (17.8%) |
Frame: 2 |
| gi|48140888|ref|XP_393525.1| similar to ENSANGP00000020592 [Apis mellifera] |
| Match: gi|1049086|gb|AAA93072.1| |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 36.42% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|1049086|gb|AAA93072.1| SRp55-3 |
| Match: gi|31543689|ref|NP_080775.2| |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 36.99% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|31543689|ref|NP_080775.2| arginine/serine-rich splicing factor 6 [Mus musculus] gi|15080592|gb|AAH12039.1| Splicin... |
| Match: gi|12836310|dbj|BAB23599.1| |
score: 96.29 |
e-value: 1.3e-18 |
Identity: 36.99% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus] |
| Match: gi|28571689|ref|NP_788665.1| |
score: 95.52 |
e-value: 2.2e-18 |
Identity: 41.48% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28571689|ref|NP_788665.1| CG10851-PA [Drosophila melanogaster] gi|28571699|ref|NP_788666.1| CG10851-PC [Drosophila... |
| Match: gi|103283|pir||A40459 |
score: 95.52 |
e-value: 2.2e-18 |
Identity: 41.48% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|103283|pir||A40459 nuclear phosphoprotein SRp55 - fruit fly (Drosophila melanogaster) gi|8497|emb|CAA41556.1| SRp5... |
| Match: gi|1403024|emb|CAA90876.1| |
score: 95.13 |
e-value: 2.9e-18 |
Identity: 38.98% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans] |
| Match: gi|47212671|emb|CAF94152.1| |
score: 94.36 |
e-value: 5e-18 |
Identity: 36.9% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47575808|ref|NP_001001248.1| |
score: 94.36 |
e-value: 5e-18 |
Identity: 35.5% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|47575808|ref|NP_001001248.1| hypothetical protein MGC76055 [Xenopus tropicalis] >gi|45872604|gb|AAH68213.1| Hypoth... |
| Match: gi|28436899|gb|AAH46668.1| |
score: 93.97 |
e-value: 6.5e-18 |
Identity: 34.91% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis] |
| Match: gi|31212495|ref|XP_315232.1| |
score: 93.97 |
e-value: 6.5e-18 |
Identity: 38.07% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|31212495|ref|XP_315232.1| ENSANGP00000021579 [Anopheles gambiae] gi|30176217|gb|EAA10559.2| ENSANGP00000021579 [An... |
| Match: gi|3929402|sp|P26686|SR55_DROME |
score: 93.59 |
e-value: 8.5e-18 |
Identity: 37.57% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|3929402|sp|P26686|SR55_DROME Serine-arginine protein 55 (SRP55) (Enhancer of deformed) (52-kDa bracketing protein)... |
| Match: gi|28571691|ref|NP_788668.1| |
score: 93.59 |
e-value: 8.5e-18 |
Identity: 37.57% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28571691|ref|NP_788668.1| CG10851-PB [Drosophila melanogaster] gi|7299789|gb|AAF54968.1| CG10851-PB [Drosophila me... |
| Match: gi|103056|pir||A37282 |
score: 93.59 |
e-value: 8.5e-18 |
Identity: 37.57% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|103056|pir||A37282 52K active chromatin boundary protein - fruit fly (Drosophila melanogaster) |
| Match: gi|28422195|gb|AAH44265.1| |
score: 92.82 |
e-value: 1.4e-17 |
Identity: 34.86% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis] |
| Match: gi|47220462|emb|CAG03242.1| |
score: 92.05 |
e-value: 2.5e-17 |
Identity: 33.71% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47087341|ref|NP_998631.1| |
score: 88.2 |
e-value: 3.6e-16 |
Identity: 31.55% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|47087341|ref|NP_998631.1| zgc:63770 [Danio rerio] >gi|32822789|gb|AAH55238.1| Zgc:63770 protein [Danio rerio] |
| Match: gi|1168968|sp|Q09167|SFR5_RAT |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 36.09% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|1168968|sp|Q09167|SFR5_RAT Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induc... |
| Match: gi|48097245|ref|XP_391860.1| |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 33.85% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|48097245|ref|XP_391860.1| similar to ENSANGP00000021579 [Apis mellifera] |
| Match: gi|12841460|dbj|BAB25217.1| |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 36.09% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus] |
| Match: gi|3929378|sp|Q13243|SFR5_HUMAN |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 36.09% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|3929378|sp|Q13243|SFR5_HUMAN Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Delayed-ear... |
| Match: gi|30583835|gb|AAP36166.1| |
score: 86.27 |
e-value: 1.4e-15 |
Identity: 36.09% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic construct] |
| Match: gi|6677919|ref|NP_033185.1| |
score: 84.73 |
e-value: 3.9e-15 |
Identity: 36.97% |
Span: 492bp (38.5%) |
Frame: 2 |
| gi|6677919|ref|NP_033185.1| splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus] gi|3929369|sp|O35326|... |
| Match: gi|45120092|ref|NP_957161.1| |
score: 84.73 |
e-value: 3.9e-15 |
Identity: 33.33% |
Span: 531bp (41.5%) |
Frame: 2 |
| gi|45120092|ref|NP_957161.1| splicing factor, arginine/serine-rich 5 [Danio rerio] >gi|37681945|gb|AAQ97850.1| splici... |
| Match: gi|47221305|emb|CAG13241.1| |
score: 83.57 |
e-value: 8.8e-15 |
Identity: 36.21% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|28571697|ref|NP_788667.1| |
score: 82.8 |
e-value: 1.5e-14 |
Identity: 39.2% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28571697|ref|NP_788667.1| CG10851-PE [Drosophila melanogaster] gi|23171194|gb|AAN13576.1| CG10851-PE [Drosophila m... |
| Match: gi|28278124|gb|AAH44085.1| |
score: 80.88 |
e-value: 5.7e-14 |
Identity: 33.52% |
Span: 504bp (39.4%) |
Frame: 2 |
| gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis] |
| Match: gi|19115482|ref|NP_594570.1| |
score: 77.8 |
e-value: 4.8e-13 |
Identity: 32.73% |
Span: 495bp (38.7%) |
Frame: 2 |
| gi|19115482|ref|NP_594570.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe] gi|26399937|sp|P78814|SRP2... |
| Match: gi|11346379|pir||T42525 |
score: 77.8 |
e-value: 4.8e-13 |
Identity: 32.73% |
Span: 495bp (38.7%) |
Frame: 2 |
| gi|11346379|pir||T42525 splicing factor-like protein - fission yeast (Schizosaccharomyces pombe) (fragment) gi|17495... |
| Match: gi|22268151|gb|AAH26944.1| |
score: 76.26 |
e-value: 1.4e-12 |
Identity: 40.77% |
Span: 390bp (30.5%) |
Frame: 2 |
| gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus] |
| Match: gi|32413751|ref|XP_327355.1| |
score: 76.26 |
e-value: 1.4e-12 |
Identity: 32.76% |
Span: 519bp (40.6%) |
Frame: 2 |
| gi|32413751|ref|XP_327355.1| predicted protein [Neurospora crassa] gi|28921822|gb|EAA31098.1| predicted protein [Neur... |
| Match: gi|47212671|emb|CAF94152.1| |
score: 75.1 |
e-value: 3.1e-12 |
Identity: 37.69% |
Span: 390bp (30.5%) |
Frame: 2 |
| gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|49095308|ref|XP_409115.1| |
score: 74.71 |
e-value: 4.1e-12 |
Identity: 32.18% |
Span: 519bp (40.6%) |
Frame: 2 |
| gi|49095308|ref|XP_409115.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4] >gi|40741866|gb|EAA61056.1|... |
| Match: gi|46134285|ref|XP_389458.1| |
score: 74.33 |
e-value: 5.3e-12 |
Identity: 31.58% |
Span: 510bp (39.9%) |
Frame: 2 |
| gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1] >gi|42554080|gb|EAA76923.1| hypoth... |
| Match: gi|46228840|gb|EAK89710.1| |
score: 73.56 |
e-value: 9.1e-12 |
Identity: 28.99% |
Span: 507bp (39.6%) |
Frame: 2 |
| gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum] |
| Match: gi|47224367|emb|CAG09213.1| |
score: 73.17 |
e-value: 1.2e-11 |
Identity: 38.62% |
Span: 420bp (32.8%) |
Frame: 2 |
| gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|25144922|ref|NP_741447.1| |
score: 67.78 |
e-value: 5e-10 |
Identity: 45.83% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|25144922|ref|NP_741447.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (16.4 kD) (rsp-6) [Caenorhabditis ... |
| Match: gi|25144924|ref|NP_741448.1| |
score: 67.78 |
e-value: 5e-10 |
Identity: 45.83% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|25144924|ref|NP_741448.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (12.9 kD) (rsp-6) [Caenorhabditis ... |
| Match: gi|25144919|ref|NP_741446.1| |
score: 67.78 |
e-value: 5e-10 |
Identity: 45.83% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|25144919|ref|NP_741446.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (20.5 kD) (rsp-6) [Caenorhabditis ... |
| Match: gi|39595017|emb|CAE70885.1| |
score: 67.78 |
e-value: 5e-10 |
Identity: 45.83% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|39595017|emb|CAE70885.1| Hypothetical protein CBG17675 [Caenorhabditis briggsae] |
| Match: gi|24641772|ref|NP_572880.2| |
score: 66.24 |
e-value: 1.4e-09 |
Identity: 45.83% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|24641772|ref|NP_572880.2| CG1987-PA [Drosophila melanogaster] gi|21064531|gb|AAM29495.1| RE47308p [Drosophila mela... |
| Match: gi|48141857|ref|XP_397274.1| |
score: 65.47 |
e-value: 2.5e-09 |
Identity: 45.33% |
Span: 225bp (17.6%) |
Frame: 2 |
| gi|48141857|ref|XP_397274.1| similar to ENSANGP00000016046 [Apis mellifera] |
| Match: gi|31199105|ref|XP_308500.1| |
score: 64.31 |
e-value: 5.5e-09 |
Identity: 44.44% |
Span: 216bp (16.9%) |
Frame: 2 |
| gi|31199105|ref|XP_308500.1| ENSANGP00000016046 [Anopheles gambiae] gi|21292162|gb|EAA04307.1| ENSANGP00000016046 [An... |
|
| 1 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 50 hits recorded |
| Match: At3g49430.1 |
score: 283.1 |
e-value: 2e-76 |
Identity: 78.39% |
Span: 576bp (45.0%) |
Frame: 2 |
| At3g49430.1 68410.m05002 arginine/serine-rich splicing factor (atSRp34), putative NULL |
| Match: At1g09140.1 |
score: 241.9 |
e-value: 5e-64 |
Identity: 64.06% |
Span: 576bp (45.0%) |
Frame: 2 |
| At1g09140.1 68408.m00913 arginine/serine-rich splicing factor, atSRp30 SF2/ASF splicing modulator Srp30 |
| Match: At1g02840.3 |
score: 231.9 |
e-value: 5.2e-61 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.1 |
score: 231.9 |
e-value: 5.2e-61 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.2 |
score: 231.9 |
e-value: 5.2e-61 |
Identity: 65.64% |
Span: 573bp (44.8%) |
Frame: 2 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At4g02430.2 |
score: 223.4 |
e-value: 1.8e-58 |
Identity: 65.82% |
Span: 573bp (44.8%) |
Frame: 2 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.1 |
score: 202.6 |
e-value: 3.4e-52 |
Identity: 66.48% |
Span: 513bp (40.1%) |
Frame: 2 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At2g37340.1 |
score: 58.54 |
e-value: 7.9e-09 |
Identity: 41.67% |
Span: 216bp (16.9%) |
Frame: 2 |
| At2g37340.1 68409.m04145 splicing factor RSZ33, putative nearly identical to splicing factor RSZ33 [Arabidopsis thali... |
| Match: At3g53500.2 |
score: 58.15 |
e-value: 1e-08 |
Identity: 42.86% |
Span: 210bp (16.4%) |
Frame: 2 |
| At3g53500.2 68410.m05465 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At2g24590.1 |
score: 57 |
e-value: 2.3e-08 |
Identity: 49.18% |
Span: 183bp (14.3%) |
Frame: 2 |
| At2g24590.1 68409.m02659 RSZp22 splicing factor -related |
| Match: At4g31580.1 |
score: 55.45 |
e-value: 6.6e-08 |
Identity: 45.9% |
Span: 183bp (14.3%) |
Frame: 2 |
| At4g31580.1 68411.m04084 splicing factor SRZ_22 9G8-like serine/arginine-rich (SR) protein (Plant Cell 10,1637-1647 (... |
| Match: At2g46610.1 |
score: 53.91 |
e-value: 1.9e-07 |
Identity: 43.75% |
Span: 192bp (15.0%) |
Frame: 2 |
| At2g46610.1 68409.m05251 arginine/serine-rich splicing factor RSP31, putative |
| Match: At3g61860.1 |
score: 53.91 |
e-value: 1.9e-07 |
Identity: 42.11% |
Span: 222bp (17.4%) |
Frame: 2 |
| At3g61860.1 68410.m06419 arginine/serine-rich splicing factor, atRSp31 |
| Match: At5g19960.1 |
score: 53.14 |
e-value: 3.3e-07 |
Identity: 41.67% |
Span: 210bp (16.4%) |
Frame: 2 |
| At5g19960.1 68412.m02178 RNA recognition motif (RRM) - containing protein low similarity to glycine-rich RNA-binding ... |
| Match: At4g25500.1 |
score: 53.14 |
e-value: 3.3e-07 |
Identity: 40.54% |
Span: 216bp (16.9%) |
Frame: 2 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At5g52040.2 |
score: 52.76 |
e-value: 4.3e-07 |
Identity: 39.19% |
Span: 216bp (16.9%) |
Frame: 2 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.1 |
score: 52.76 |
e-value: 4.3e-07 |
Identity: 39.19% |
Span: 216bp (16.9%) |
Frame: 2 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At1g23860.2 |
score: 49.29 |
e-value: 4.8e-06 |
Identity: 42.62% |
Span: 183bp (14.3%) |
Frame: 2 |
| At1g23860.2 68414.m03010 splicing factor RSZp21 (RSZP21) / 9G8-like SR protein (SRZ21) nearly identical to 9G8-like s... |
| Match: At1g23860.1 |
score: 49.29 |
e-value: 4.8e-06 |
Identity: 42.62% |
Span: 183bp (14.3%) |
Frame: 2 |
| At1g23860.1 68408.m02723 splicing factor SRZ_21 9G8-like serine/arginine-rich (SR) protein (Plant Cell 10,1637-1647 (... |
| Match: At4g12640.1 |
score: 48.14 |
e-value: 1.1e-05 |
Identity: 38.67% |
Span: 225bp (17.6%) |
Frame: 2 |
| At4g12640.1 68411.m01803 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g37220.1 |
score: 46.59 |
e-value: 3.1e-05 |
Identity: 30.67% |
Span: 216bp (16.9%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At1g03457.1 |
score: 46.21 |
e-value: 4e-05 |
Identity: 25% |
Span: 255bp (19.9%) |
Frame: 2 |
| At1g03457.1 68408.m00292 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At1g03457.2 |
score: 46.21 |
e-value: 4e-05 |
Identity: 25% |
Span: 255bp (19.9%) |
Frame: 2 |
| At1g03457.2 68414.m00327 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At5g43960.1 |
score: 45.05 |
e-value: 9e-05 |
Identity: 37.88% |
Span: 186bp (14.5%) |
Frame: 2 |
| At5g43960.1 68412.m04849 NTF2-containing RNA-binding protein, putative similar to unknown protein (gb|AAD20086.1) |
| Match: At5g43960.2 |
score: 45.05 |
e-value: 9e-05 |
Identity: 37.88% |
Span: 186bp (14.5%) |
Frame: 2 |
| At5g43960.2 68418.m05378 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing pr... |
| Match: At5g50250.1 |
score: 44.67 |
e-value: 0.00012 |
Identity: 32% |
Span: 216bp (16.9%) |
Frame: 2 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g11400.1 |
score: 44.28 |
e-value: 0.00015 |
Identity: 34.21% |
Span: 219bp (17.1%) |
Frame: 2 |
| At3g11400.1 68410.m01256 eukaryotic translation initiation factor 3 subunit g (eIF3g) nearly identical to eukaryotic ... |
| Match: At5g12190.1 |
score: 43.51 |
e-value: 0.00026 |
Identity: 34.29% |
Span: 210bp (16.4%) |
Frame: 2 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At4g24770.1 |
score: 43.13 |
e-value: 0.00034 |
Identity: 30.67% |
Span: 216bp (16.9%) |
Frame: 2 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g60650.1 |
score: 42.74 |
e-value: 0.00045 |
Identity: 32.35% |
Span: 195bp (15.2%) |
Frame: 2 |
| At1g60650.1 68408.m08723 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At1g60650.2 |
score: 42.74 |
e-value: 0.00045 |
Identity: 32.35% |
Span: 195bp (15.2%) |
Frame: 2 |
| At1g60650.2 68408.m08724 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At5g44200.1 |
score: 42.36 |
e-value: 0.00058 |
Identity: 33.33% |
Span: 225bp (17.6%) |
Frame: 2 |
| At5g44200.1 68412.m04876 nuclear cap binding protein, putative similar to SP|P52298 20 kDa nuclear cap binding protei... |
| Match: At3g53460.2 |
score: 41.2 |
e-value: 0.001 |
Identity: 29.33% |
Span: 216bp (16.9%) |
Frame: 2 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g37220.1 |
score: 41.2 |
e-value: 0.001 |
Identity: 29.94% |
Span: 504bp (39.4%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g53460.1 |
score: 41.2 |
e-value: 0.001 |
Identity: 29.33% |
Span: 216bp (16.9%) |
Frame: 2 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g52660.1 |
score: 40.43 |
e-value: 0.002 |
Identity: 31.65% |
Span: 222bp (17.4%) |
Frame: 2 |
| At3g52660.1 68410.m05372 RNA recognition motif (RRM) - containing protein heterogeneous nuclear ribonucleoprotein R, ... |
| Match: At1g71800.1 |
score: 40.43 |
e-value: 0.002 |
Identity: 28.57% |
Span: 222bp (17.4%) |
Frame: 2 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At1g11650.2 |
score: 40.05 |
e-value: 0.003 |
Identity: 31.43% |
Span: 210bp (16.4%) |
Frame: 2 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g74230.1 |
score: 40.05 |
e-value: 0.003 |
Identity: 30.77% |
Span: 225bp (17.6%) |
Frame: 2 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At3g50670.1 |
score: 40.05 |
e-value: 0.003 |
Identity: 27.63% |
Span: 219bp (17.1%) |
Frame: 2 |
| At3g50670.1 68410.m05135 U1 small nuclear ribonucleoprotein 70 (U1-70k) |
| Match: At4g13860.1 |
score: 39.66 |
e-value: 0.004 |
Identity: 31.08% |
Span: 213bp (16.7%) |
Frame: 2 |
| At4g13860.1 68411.m01943 RNA recognition motif (RRM) - containing protein similar to glycine-rich RNA binding protein... |
| Match: At4g09040.1 |
score: 39.66 |
e-value: 0.004 |
Identity: 30% |
Span: 204bp (15.9%) |
Frame: 2 |
| At4g09040.1 68411.m01341 RNA recognition motif (RRM) - containing protein low similarity to enhancer binding protein-... |
| Match: At5g41690.1 |
score: 39.66 |
e-value: 0.004 |
Identity: 28.95% |
Span: 222bp (17.4%) |
Frame: 2 |
| At5g41690.1 68412.m04569 polyadenylate-binding protein (poly(A)-binding protein), putative similar to poly(A)-binding... |
| Match: At1g03457.1 |
score: 39.28 |
e-value: 0.005 |
Identity: 31.34% |
Span: 192bp (15.0%) |
Frame: 2 |
| At1g03457.1 68408.m00292 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At4g03110.1 |
score: 39.28 |
e-value: 0.005 |
Identity: 33.33% |
Span: 192bp (15.0%) |
Frame: 2 |
| At4g03110.1 68411.m00381 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At4g03110.2 |
score: 39.28 |
e-value: 0.005 |
Identity: 33.33% |
Span: 192bp (15.0%) |
Frame: 2 |
| At4g03110.2 68411.m00382 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At5g06000.1 |
score: 38.89 |
e-value: 0.006 |
Identity: 32.43% |
Span: 213bp (16.7%) |
Frame: 2 |
| At5g06000.1 68412.m00618 eukaryotic translation initiation factor 3, putative similar to eukaryotic translation initi... |
| Match: At5g60980.1 |
score: 38.51 |
e-value: 0.008 |
Identity: 36.84% |
Span: 165bp (12.9%) |
Frame: 2 |
| At5g60980.1 68412.m08037 NTF2-containing RNA-binding protein, putative G3BP ras-GTPase-activating protein SH3-domain ... |
| Match: At4g10110.1 |
score: 38.51 |
e-value: 0.008 |
Identity: 25.76% |
Span: 189bp (14.8%) |
Frame: 2 |
| At4g10110.1 68411.m01492 RNA recognition motif (RRM) - containing protein contains INTERPRO:IPR000504 RNA-binding reg... |
| Match: At2g37340.3 |
score: 38.51 |
e-value: 0.008 |
Identity: 52.94% |
Span: 102bp (8.0%) |
Frame: 2 |
| At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly identical to splicing factor RSZ33 [Arabidopsis thalian... |
|
