Notice: the solgenomics has been unstable, we apologize for the inconvenience.

All Stored BLAST annotations for SGN-U567398
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|167995454|gb|ACA13601.1| score: 754 e-value: 0 Identity: 90.26% Span: 1263bp (100.0%) Frame: 1
RNA-dependent RNA polymerase [Nicotiana attenuata]
Match: gi|51989472|gb|AAU21242.1| score: 751 e-value: 0 Identity: 90.02% Span: 1263bp (100.0%) Frame: 1
putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Match: gi|194719815|emb|CAR47810.1| score: 749 e-value: 0 Identity: 90.26% Span: 1263bp (100.0%) Frame: 1
RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Match: gi|163930853|dbj|BAF96019.1| score: 746 e-value: 0 Identity: 90.02% Span: 1263bp (100.0%) Frame: 1
RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Match: gi|157339691|emb|CAO44232.1| score: 625 e-value: 2e-177 Identity: 74.76% Span: 1260bp (99.8%) Frame: 1
unnamed
Match: gi|8248473|gb|AAF74208.1|AF268093_1 score: 622 e-value: 2e-176 Identity: 73.33% Span: 1260bp (99.8%) Frame: 1
RNA-dependent RNA polymerase [Arabidopsis thaliana]
Match: gi|15229153|ref|NP_190519.1| score: 618 e-value: 3e-175 Identity: 72.86% Span: 1260bp (99.8%) Frame: 1
RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); RNA-directed RNA polymerase/ nucleic acid binding [Arabidopsis thaliana] >gi12...
Match: gi|21328146|dbj|BAC00725.1| score: 557 e-value: 6e-157 Identity: 67.7% Span: 1260bp (99.8%) Frame: 1
putative
Match: gi|206598331|gb|ACI16098.1| score: 539 e-value: 2e-151 Identity: 63.49% Span: 1260bp (99.8%) Frame: 1
RNA-directed RNA polymerase 6a [Hordeum vulgare]
Match: gi|194707104|gb|ACF87636.1| score: 539 e-value: 2e-151 Identity: 64.17% Span: 1263bp (100.0%) Frame: 1
unknown
Match: gi|125570657|gb|EAZ12172.1| score: 471 e-value: 8e-131 Identity: 59.86% Span: 1260bp (99.8%) Frame: 1
hypothetical
Match: gi|115437172|ref|NP_001043229.1| score: 411 e-value: 5e-113 Identity: 68.15% Span: 939bp (74.3%) Frame: 1
Os01g0527600
Match: gi|106733035|gb|ABF82437.1| score: 353 e-value: 1e-95 Identity: 46.68% Span: 1218bp (96.4%) Frame: 1
putative RNA-dependent RNA polymerase 6 [Physcomitrella patens subsp. patens] >gi106733051|gb|ABF82438.1| putative RN...
Match: gi|168067479|ref|XP_001785643.1| score: 353 e-value: 1e-95 Identity: 46.68% Span: 1218bp (96.4%) Frame: 1
RNA-directed RNA polymerase [Physcomitrella patens subsp. patens] >gi162662723|gb|EDQ49541.1| RNA-directed RNA polyme...
Match: gi|70608336|gb|AAZ04410.1| score: 337 e-value: 2e-90 Identity: 92.44% Span: 516bp (40.9%) Frame: 1
gi|70608336|gb|AAZ04410.1| putative RNA-dependent RNA polymerase SDE1/SGS2/RDR6 [Nicotiana benthamiana]
Match: gi|4138343|emb|CAA09896.1| score: 314 e-value: 1e-83 Identity: 43.88% Span: 1236bp (97.9%) Frame: 1
RNA-directed RNA polymerase [Petunia x hybrida]
Match: gi|168044164|ref|XP_001774552.1| score: 313 e-value: 2e-83 Identity: 44.79% Span: 1218bp (96.4%) Frame: 1
RNA-directed RNA polymerase [Physcomitrella patens subsp. patens] >gi162674107|gb|EDQ60620.1| RNA-directed RNA polyme...
Match: gi|113205254|gb|ABI34311.1| score: 310 e-value: 2e-82 Identity: 44.09% Span: 1203bp (95.2%) Frame: 1
RNA dependent RNA polymerase family protein [Solanum demissum]
Match: gi|142942515|gb|ABO93006.1| score: 309 e-value: 3e-82 Identity: 44.09% Span: 1203bp (95.2%) Frame: 1
putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Match: gi|4038592|emb|CAA71421.1| score: 308 e-value: 9e-82 Identity: 43.7% Span: 1203bp (95.2%) Frame: 1
RNA-directed RNA polymerase [Solanum lycopersicum]
Match: gi|113205271|gb|AAT38699.2| score: 307 e-value: 1e-81 Identity: 43.6% Span: 1203bp (95.2%) Frame: 1
RNA dependent RNA polymerase family protein [Solanum demissum]
Match: gi|142942402|gb|ABO92977.1| score: 307 e-value: 1e-81 Identity: 43.6% Span: 1203bp (95.2%) Frame: 1
putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Match: gi|4138282|emb|CAA09697.1| score: 305 e-value: 4e-81 Identity: 42.86% Span: 1206bp (95.5%) Frame: 1
RNA-directed RNA polymerase [Nicotiana tabacum]
Match: gi|157339022|emb|CAO42373.1| score: 301 e-value: 6e-80 Identity: 42.72% Span: 1230bp (97.4%) Frame: 1
unnamed
Match: gi|146762448|gb|ABQ45352.1| score: 300 e-value: 1e-79 Identity: 43.58% Span: 1230bp (97.4%) Frame: 1
RNA-dependent RNA polymerase [Gossypium hirsutum]
Match: gi|113205194|gb|AAT39936.2| score: 297 e-value: 1e-78 Identity: 41.38% Span: 1203bp (95.2%) Frame: 1
RNA-directed RNA polymerase-like, putative [Solanum demissum]
Match: gi|147860348|emb|CAN82568.1| score: 296 e-value: 3e-78 Identity: 43.47% Span: 1182bp (93.6%) Frame: 1
hypothetical protein [Vitis vinifera]
Match: gi|113205257|gb|AAT38687.2| score: 295 e-value: 4e-78 Identity: 40.98% Span: 1170bp (92.6%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum demissum]
Match: gi|147853646|emb|CAN82339.1| score: 294 e-value: 1e-77 Identity: 42.24% Span: 1230bp (97.4%) Frame: 1
hypothetical protein [Vitis vinifera]
Match: gi|157339020|emb|CAO42371.1| score: 293 e-value: 3e-77 Identity: 44.05% Span: 1182bp (93.6%) Frame: 1
unnamed
Match: gi|90823307|gb|ABE01124.1| score: 293 e-value: 2e-77 Identity: 43.41% Span: 1230bp (97.4%) Frame: 1
RNA-dependent RNA polymerase [Gossypium hirsutum]
Match: gi|15223906|ref|NP_172932.1| score: 290 e-value: 2e-76 Identity: 41.77% Span: 1182bp (93.6%) Frame: 1
RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding [Arabidopsis thaliana] >gi87...
Match: gi|24935275|gb|AAN64409.1| score: 287 e-value: 2e-75 Identity: 41.52% Span: 1182bp (93.6%) Frame: 1
RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
Match: gi|113205326|gb|AAT38754.2| score: 279 e-value: 3e-73 Identity: 38.58% Span: 1203bp (95.2%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum demissum]
Match: gi|40794967|gb|AAR91037.1| score: 278 e-value: 9e-73 Identity: 41.61% Span: 1224bp (96.9%) Frame: 1
RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Match: gi|40794965|gb|AAR91036.1| score: 277 e-value: 2e-72 Identity: 41.56% Span: 1182bp (93.6%) Frame: 1
gi|40794965|gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Match: gi|197223666|gb|ACH53361.1| score: 277 e-value: 2e-72 Identity: 41.56% Span: 1182bp (93.6%) Frame: 1
RNA-directed RNA polymerase 1b [Hordeum vulgare]
Match: gi|197223664|gb|ACH53360.1| score: 277 e-value: 1e-72 Identity: 41.36% Span: 1224bp (96.9%) Frame: 1
RNA-directed RNA polymerase 1a [Hordeum vulgare]
Match: gi|4375829|emb|CAA09894.1| score: 268 e-value: 8e-70 Identity: 43.19% Span: 1032bp (81.7%) Frame: 1
RNA-directed RNA polymerase [Arabidopsis thaliana]
Match: gi|218188371|gb|EEC70798.1| score: 267 e-value: 1e-69 Identity: 62.29% Span: 705bp (55.8%) Frame: 1
hypothetical
Match: gi|125548642|gb|EAY94464.1| score: 265 e-value: 6e-69 Identity: 39.9% Span: 1191bp (94.3%) Frame: 1
hypothetical protein OsI_16234 [Oryza sativa Indica Group]
Match: gi|51989474|gb|AAU21243.1| score: 265 e-value: 6e-69 Identity: 41.56% Span: 1140bp (90.3%) Frame: 1
putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Match: gi|32492169|emb|CAE04828.1| score: 264 e-value: 1e-68 Identity: 39.9% Span: 1191bp (94.3%) Frame: 1
gi|32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Oryza sativa (japonica cultivar-group)]
Match: gi|125590671|gb|EAZ31021.1| score: 264 e-value: 1e-68 Identity: 39.9% Span: 1191bp (94.3%) Frame: 1
hypothetical
Match: gi|89473792|gb|ABD72708.1| score: 260 e-value: 2e-67 Identity: 40.4% Span: 1170bp (92.6%) Frame: 1
RNA-dependent RNA polymerase [Zea mays]
Match: gi|15237051|ref|NP_192851.1| score: 254 e-value: 1e-65 Identity: 38.48% Span: 1206bp (95.5%) Frame: 1
RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase [Arabidopsis thaliana] >gi3600048|gb|AAC35535.1| s...
Match: gi|157342254|emb|CAO64367.1| score: 246 e-value: 2e-63 Identity: 40.16% Span: 1140bp (90.3%) Frame: 1
unnamed
Match: gi|219480149|ref|XP_002237288.1| score: 237 e-value: 1e-60 Identity: 38.21% Span: 1164bp (92.2%) Frame: 1
hypothetical
Match: gi|219443188|ref|XP_002219358.1| score: 233 e-value: 2e-59 Identity: 36% Span: 1194bp (94.5%) Frame: 1
hypothetical
Match: gi|156361828|ref|XP_001625486.1| score: 228 e-value: 1e-57 Identity: 38.26% Span: 1020bp (80.8%) Frame: 1
predicted
Match: gi|33331167|gb|AAQ10792.1| score: 217 e-value: 2e-54 Identity: 37.89% Span: 1053bp (83.4%) Frame: 1
gi|33331167|gb|AAQ10792.1| RNA-directed RNA polymerase-like protein [Branchiostoma floridae]
Match: gi|115458854|ref|NP_001053027.1| score: 211 e-value: 1e-52 Identity: 42.18% Span: 870bp (68.9%) Frame: 1
Os04g0465700 [Oryza sativa (japonica cultivar-group)] >gi113564598|dbj|BAF14941.1| Os04g0465700 [Oryza sativa Japonic...
Match: gi|219484888|ref|XP_002239489.1| score: 210 e-value: 2e-52 Identity: 34.81% Span: 1188bp (94.1%) Frame: 1
hypothetical
Match: gi|142942403|gb|ABO92978.1| score: 209 e-value: 5e-52 Identity: 48.2% Span: 663bp (52.5%) Frame: 1
putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Match: gi|219408647|ref|XP_002202138.1| score: 208 e-value: 7e-52 Identity: 34.81% Span: 1188bp (94.1%) Frame: 1
hypothetical
Match: gi|219408639|ref|XP_002202134.1| score: 204 e-value: 1e-50 Identity: 35.14% Span: 1140bp (90.3%) Frame: 1
hypothetical
Match: gi|219484895|ref|XP_002239492.1| score: 203 e-value: 3e-50 Identity: 34.88% Span: 1140bp (90.3%) Frame: 1
hypothetical
Match: gi|156379597|ref|XP_001631543.1| score: 202 e-value: 7e-50 Identity: 38.87% Span: 1047bp (82.9%) Frame: 1
predicted
Match: gi|219409093|ref|XP_002202361.1| score: 200 e-value: 2e-49 Identity: 34.81% Span: 1182bp (93.6%) Frame: 1
hypothetical
Match: gi|215495344|gb|EEC04985.1| score: 198 e-value: 7e-49 Identity: 38.91% Span: 978bp (77.4%) Frame: 1
RNA-directed
Match: gi|125541045|gb|EAY87440.1| score: 197 e-value: 1e-48 Identity: 34.26% Span: 1182bp (93.6%) Frame: 1
hypothetical
Match: gi|125583609|gb|EAZ24540.1| score: 197 e-value: 1e-48 Identity: 34.26% Span: 1182bp (93.6%) Frame: 1
hypothetical
Match: gi|119192036|ref|XP_001246624.1| score: 195 e-value: 8e-48 Identity: 36.25% Span: 1143bp (90.5%) Frame: 1
hypothetical
Match: gi|113205325|gb|AAT38751.2| score: 192 e-value: 7e-47 Identity: 50.52% Span: 573bp (45.4%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum demissum]
Match: gi|142942513|gb|ABO93004.1| score: 192 e-value: 7e-47 Identity: 50.52% Span: 573bp (45.4%) Frame: 1
putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Match: gi|169780380|ref|XP_001824654.1| score: 191 e-value: 9e-47 Identity: 34.14% Span: 1167bp (92.4%) Frame: 1
hypothetical
Match: gi|145610056|ref|XP_001410043.1| score: 190 e-value: 2e-46 Identity: 35.99% Span: 1098bp (86.9%) Frame: 1
hypothetical
Match: gi|149210027|ref|XP_001522388.1| score: 190 e-value: 2e-46 Identity: 35.99% Span: 1098bp (86.9%) Frame: 1
hypothetical
Match: gi|215503015|gb|EEC12509.1| score: 188 e-value: 1e-45 Identity: 36.55% Span: 1008bp (79.8%) Frame: 1
RNA-directed
Match: gi|156035913|ref|XP_001586068.1| score: 187 e-value: 1e-45 Identity: 35.37% Span: 1143bp (90.5%) Frame: 1
hypothetical
Match: gi|219484842|ref|XP_002239467.1| score: 186 e-value: 3e-45 Identity: 33.25% Span: 1182bp (93.6%) Frame: 1
hypothetical
Match: gi|154290540|ref|XP_001545863.1| score: 185 e-value: 6e-45 Identity: 34.59% Span: 1152bp (91.2%) Frame: 1
hypothetical
Match: gi|115402503|ref|XP_001217328.1| score: 185 e-value: 8e-45 Identity: 34.09% Span: 1143bp (90.5%) Frame: 1
conserved
Match: gi|121704872|ref|XP_001270699.1| score: 184 e-value: 1e-44 Identity: 33.33% Span: 1158bp (91.7%) Frame: 1
RNA-directed
Match: gi|169595008|ref|XP_001790928.1| score: 183 e-value: 2e-44 Identity: 33.42% Span: 1137bp (90.0%) Frame: 1
hypothetical
Match: gi|159127939|gb|EDP53054.1| score: 182 e-value: 5e-44 Identity: 33.76% Span: 1131bp (89.5%) Frame: 1
RNA-directed
Match: gi|146323311|ref|XP_754927.2| score: 182 e-value: 5e-44 Identity: 33.76% Span: 1131bp (89.5%) Frame: 1
RNA-directed
Match: gi|116193483|ref|XP_001222554.1| score: 181 e-value: 1e-43 Identity: 34.11% Span: 1149bp (91.0%) Frame: 1
hypothetical
Match: gi|212544602|ref|XP_002152455.1| score: 181 e-value: 1e-43 Identity: 34.18% Span: 1131bp (89.5%) Frame: 1
RNA-directed
Match: gi|145245289|ref|XP_001394912.1| score: 180 e-value: 3e-43 Identity: 34.99% Span: 1038bp (82.2%) Frame: 1
hypothetical
Match: gi|119493033|ref|XP_001263772.1| score: 178 e-value: 1e-42 Identity: 33.08% Span: 1131bp (89.5%) Frame: 1
RNA-directed
Match: gi|13641451|gb|AAK31733.1| score: 174 e-value: 1e-41 Identity: 33.92% Span: 1179bp (93.3%) Frame: 1
gi|13641451|gb|AAK31733.1| suppressor of ascus dominance [Neurospora crassa] >gi|32417780|ref|XP_329368.1| hypothetic...
Match: gi|115448543|ref|NP_001048051.1| score: 171 e-value: 1e-40 Identity: 51.2% Span: 498bp (39.4%) Frame: 1
Os02g0736200
Match: gi|215503415|gb|EEC12909.1| score: 170 e-value: 3e-40 Identity: 34.35% Span: 975bp (77.2%) Frame: 1
RNA-directed
Match: gi|211587583|emb|CAP85624.1| score: 170 e-value: 2e-40 Identity: 32.42% Span: 1146bp (90.7%) Frame: 1
Pc20g02950
Match: gi|17508703|ref|NP_492131.1| score: 169 e-value: 6e-40 Identity: 33.07% Span: 1071bp (84.8%) Frame: 1
gi|17508703|ref|NP_492131.1| RNA-dependent RNA polymerase Family member (186.8 kD) (rrf-1) [Caenorhabditis elegans] g...
Match: gi|189202022|ref|XP_001937347.1| score: 169 e-value: 4e-40 Identity: 32.96% Span: 1029bp (81.5%) Frame: 1
RNA-directed
Match: gi|215496312|gb|EEC05952.1| score: 168 e-value: 1e-39 Identity: 35.69% Span: 924bp (73.2%) Frame: 1
RNA-directed
Match: gi|170582151|ref|XP_001896001.1| score: 167 e-value: 2e-39 Identity: 29.86% Span: 1206bp (95.5%) Frame: 1
RNA
Match: gi|157749727|ref|XP_001678577.1| score: 167 e-value: 1e-39 Identity: 31.39% Span: 1131bp (89.5%) Frame: 1
Hypothetical
Match: gi|46128677|ref|XP_388892.1| score: 166 e-value: 5e-39 Identity: 32.28% Span: 1197bp (94.8%) Frame: 1
gi|46128677|ref|XP_388892.1| hypothetical protein FG08716.1 [Gibberella zeae PH-1] >gi|42549570|gb|EAA72413.1| hypoth...
Match: gi|17506499|ref|NP_492132.1| score: 166 e-value: 5e-39 Identity: 31.76% Span: 1128bp (89.3%) Frame: 1
gi|17506499|ref|NP_492132.1| RNA-directed RNA polymerase related, regulates germline development and RNA interference...
Match: gi|113205403|gb|ABI34378.1| score: 164 e-value: 2e-38 Identity: 36.14% Span: 876bp (69.4%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum tuberosum]
Match: gi|218714411|gb|EED13834.1| score: 162 e-value: 6e-38 Identity: 33.88% Span: 1038bp (82.2%) Frame: 1
RNA-directed
Match: gi|111610628|gb|ABH11712.1| score: 161 e-value: 1e-37 Identity: 31.66% Span: 1146bp (90.7%) Frame: 1
RNA-dependent
Match: gi|157744723|ref|XP_001667458.1| score: 161 e-value: 1e-37 Identity: 30.64% Span: 1131bp (89.5%) Frame: 1
Hypothetical
Match: gi|118386404|ref|XP_001026321.1| score: 161 e-value: 1e-37 Identity: 31.66% Span: 1146bp (90.7%) Frame: 1
RNA
Match: gi|17508365|ref|NP_493057.1| score: 158 e-value: 1e-36 Identity: 30.86% Span: 1134bp (89.8%) Frame: 1
gi|17508365|ref|NP_493057.1| RNA-dependent RNA polymerase Family member (rrf-2) [Caenorhabditis elegans] gi|13655331|...
Match: gi|113205403|gb|ABI34378.1| score: 134 e-value: 2e-29 Identity: 48.25% Span: 426bp (33.7%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum tuberosum]
Match: gi|113205325|gb|AAT38751.2| score: 125 e-value: 6e-27 Identity: 38.1% Span: 621bp (49.2%) Frame: 1
RNA-directed RNA polymerase, putative [Solanum demissum]

81 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 6 hits recorded
Match: At3G49500.1 score: 618 e-value: 2e-177 Identity: 72.86% Span: 1260bp (99.8%) Frame: 1
Symbols: SGS2, SDE1, RDR6 | RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding | chr3:18360178-18364190 REV...
Match: At1G14790.1 score: 290 e-value: 1e-78 Identity: 41.77% Span: 1182bp (93.6%) Frame: 1
Symbols: ATRDRP1, RDR1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | ...
Match: At4G11130.1 score: 254 e-value: 1e-67 Identity: 38.48% Span: 1206bp (95.5%) Frame: 1
Symbols: RDR2 | RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase | chr4:6780518-6784386 FORWARD
Match: At2G19920.1 score: 91.7 e-value: 9e-19 Identity: 27.48% Span: 873bp (69.1%) Frame: 1
RNA-dependent RNA polymerase family protein | chr2:8609304-8613969 REVERSE
Match: At2G19930.1 score: 91.7 e-value: 9e-19 Identity: 27.19% Span: 894bp (70.8%) Frame: 1
RNA-dependent RNA polymerase family protein | chr2:8614615-8619523 REVERSE
Match: At2G19910.1 score: 88.2 e-value: 1e-17 Identity: 26.76% Span: 831bp (65.8%) Frame: 1
RNA-dependent RNA polymerase family protein | chr2:8602902-8607839 REVERSE

swissprot [blastx] Showing best 1 hits recorded
Match: O14227 score: 145 e-value: 5e-34 Identity: 31.08% Span: 1134bp (89.8%) Frame: 1
RNA-dependent RNA polymerase 1 OS=Schizosaccharomyces pombe GN=rdr1 PE=1 SV=1