| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|20009|emb|CAA43429.1| |
score: 483 |
e-value: 1e-134 |
Identity: 100% |
Span: 876bp (70.1%) |
Frame: 1 |
| ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|311952|emb|CAA41253.1| |
score: 478 |
e-value: 4e-133 |
Identity: 91.98% |
Span: 972bp (77.8%) |
Frame: 1 |
| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris] |
| Match: gi|133249|sp|P19684|ROC5_NICSY |
score: 464 |
e-value: 6e-129 |
Identity: 89.51% |
Span: 972bp (77.8%) |
Frame: 1 |
| gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor gi|100390|pir||S12111 ribonucleoprotei... |
| Match: gi|157359111|emb|CAO67026.1| |
score: 282 |
e-value: 3e-74 |
Identity: 68.57% |
Span: 630bp (50.4%) |
Frame: 1 |
| unnamed |
| Match: gi|147769830|emb|CAN61277.1| |
score: 280 |
e-value: 2e-73 |
Identity: 68.1% |
Span: 630bp (50.4%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 263 |
e-value: 2e-68 |
Identity: 61.54% |
Span: 657bp (52.6%) |
Frame: 1 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|681912|dbj|BAA06523.1| |
score: 261 |
e-value: 1e-67 |
Identity: 61.36% |
Span: 654bp (52.3%) |
Frame: 1 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|17064758|gb|AAL32533.1| |
score: 260 |
e-value: 1e-67 |
Identity: 61.09% |
Span: 657bp (52.6%) |
Frame: 1 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|118487510|gb|ABK95582.1| |
score: 237 |
e-value: 2e-60 |
Identity: 59.8% |
Span: 597bp (47.8%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|115470657|ref|NP_001058927.1| |
score: 204 |
e-value: 1e-50 |
Identity: 48.64% |
Span: 660bp (52.8%) |
Frame: 1 |
| Os07g0158300 [Oryza sativa (japonica cultivar-group)] >gi34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza... |
| Match: gi|3550485|emb|CAA11894.1| |
score: 202 |
e-value: 5e-50 |
Identity: 46.4% |
Span: 660bp (52.8%) |
Frame: 1 |
| cp33Hv [Hordeum vulgare subsp. vulgare] |
| Match: gi|125599171|gb|EAZ38747.1| |
score: 185 |
e-value: 6e-45 |
Identity: 47.37% |
Span: 627bp (50.2%) |
Frame: 1 |
| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group] |
| Match: gi|116793682|gb|ABK26841.1| |
score: 179 |
e-value: 5e-43 |
Identity: 45.02% |
Span: 633bp (50.6%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|116781814|gb|ABK22250.1| |
score: 179 |
e-value: 5e-43 |
Identity: 45.02% |
Span: 633bp (50.6%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|168033890|ref|XP_001769447.1| |
score: 154 |
e-value: 2e-35 |
Identity: 40% |
Span: 630bp (50.4%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162679367|gb|EDQ65816.1| predicted protein [Physcomitrella... |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 151 |
e-value: 9e-35 |
Identity: 45.51% |
Span: 501bp (40.1%) |
Frame: 1 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|168054274|ref|XP_001779557.1| |
score: 150 |
e-value: 2e-34 |
Identity: 38.03% |
Span: 636bp (50.9%) |
Frame: 1 |
| predicted |
| Match: gi|17432522|gb|AAL39067.1|AF389431_1 |
score: 149 |
e-value: 6e-34 |
Identity: 44.19% |
Span: 501bp (40.1%) |
Frame: 1 |
| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|168029395|ref|XP_001767211.1| |
score: 148 |
e-value: 1e-33 |
Identity: 38.6% |
Span: 624bp (49.9%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681466|gb|EDQ67892.1| predicted protein [Physcomitrella... |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 147 |
e-value: 2e-33 |
Identity: 44.44% |
Span: 501bp (40.1%) |
Frame: 1 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|149392545|gb|ABR26075.1| |
score: 147 |
e-value: 2e-33 |
Identity: 45.2% |
Span: 501bp (40.1%) |
Frame: 1 |
| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|12230585|sp|Q08937|ROC2_NICSY |
score: 147 |
e-value: 2e-33 |
Identity: 41.3% |
Span: 501bp (40.1%) |
Frame: 1 |
| gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) gi|100294|pir||S20070 ribo... |
| Match: gi|115473531|ref|NP_001060364.1| |
score: 146 |
e-value: 3e-33 |
Identity: 44.63% |
Span: 501bp (40.1%) |
Frame: 1 |
| Os07g0631900 [Oryza sativa (japonica cultivar-group)] >gi22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A... |
| Match: gi|125559266|gb|EAZ04802.1| |
score: 146 |
e-value: 3e-33 |
Identity: 44.63% |
Span: 501bp (40.1%) |
Frame: 1 |
| hypothetical protein OsI_26976 [Oryza sativa Indica Group] |
| Match: gi|1350821|sp|P49314|ROC2_NICPL |
score: 146 |
e-value: 4e-33 |
Identity: 40.76% |
Span: 501bp (40.1%) |
Frame: 1 |
| gi|1350821|sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) gi|280403|pir||S26204 RNA-... |
| Match: gi|115453241|ref|NP_001050221.1| |
score: 143 |
e-value: 3e-32 |
Identity: 37.91% |
Span: 630bp (50.4%) |
Frame: 1 |
| Os03g0376600 [Oryza sativa (japonica cultivar-group)] >gi18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotei... |
| Match: gi|116790996|gb|ABK25816.1| |
score: 143 |
e-value: 3e-32 |
Identity: 38.24% |
Span: 612bp (49.0%) |
Frame: 1 |
| unknown |
| Match: gi|125544079|gb|EAY90218.1| |
score: 142 |
e-value: 4e-32 |
Identity: 37.91% |
Span: 630bp (50.4%) |
Frame: 1 |
| hypothetical protein OsI_11785 [Oryza sativa Indica Group] |
| Match: gi|118486835|gb|ABK95252.1| |
score: 139 |
e-value: 5e-31 |
Identity: 37.14% |
Span: 627bp (50.2%) |
Frame: 1 |
| unknown |
| Match: gi|1015370|gb|AAA79045.1| |
score: 139 |
e-value: 6e-31 |
Identity: 40.12% |
Span: 501bp (40.1%) |
Frame: 1 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|157336790|emb|CAO71475.1| |
score: 139 |
e-value: 6e-31 |
Identity: 37.56% |
Span: 615bp (49.2%) |
Frame: 1 |
| unnamed |
| Match: gi|116786296|gb|ABK24055.1| |
score: 138 |
e-value: 1e-30 |
Identity: 41.28% |
Span: 495bp (39.6%) |
Frame: 1 |
| unknown |
| Match: gi|558629|emb|CAA57551.1| |
score: 137 |
e-value: 2e-30 |
Identity: 36.06% |
Span: 624bp (49.9%) |
Frame: 1 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|21617920|gb|AAM66970.1| |
score: 137 |
e-value: 2e-30 |
Identity: 39.43% |
Span: 495bp (39.6%) |
Frame: 1 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15228102|ref|NP_181259.1| |
score: 137 |
e-value: 2e-30 |
Identity: 39.43% |
Span: 495bp (39.6%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|157347527|emb|CAO18164.1| |
score: 137 |
e-value: 1e-30 |
Identity: 39.66% |
Span: 501bp (40.1%) |
Frame: 1 |
| unnamed |
| Match: gi|125541605|gb|EAY88000.1| |
score: 137 |
e-value: 1e-30 |
Identity: 37.07% |
Span: 615bp (49.2%) |
Frame: 1 |
| hypothetical protein OsI_09422 [Oryza sativa Indica Group] |
| Match: gi|115449577|ref|NP_001048500.1| |
score: 137 |
e-value: 1e-30 |
Identity: 37.07% |
Span: 615bp (49.2%) |
Frame: 1 |
| Os02g0815200 [Oryza sativa (japonica cultivar-group)] >gi47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 p... |
| Match: gi|2104687|emb|CAA66479.1| |
score: 136 |
e-value: 3e-30 |
Identity: 37.5% |
Span: 624bp (49.9%) |
Frame: 1 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|116787606|gb|ABK24573.1| |
score: 135 |
e-value: 7e-30 |
Identity: 37.68% |
Span: 621bp (49.7%) |
Frame: 1 |
| unknown |
| Match: gi|116788830|gb|ABK25016.1| |
score: 134 |
e-value: 2e-29 |
Identity: 37.56% |
Span: 615bp (49.2%) |
Frame: 1 |
| unknown |
| Match: gi|168054234|ref|XP_001779537.1| |
score: 134 |
e-value: 1e-29 |
Identity: 36.07% |
Span: 624bp (49.9%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669018|gb|EDQ55613.1| predicted protein [Physcomitrella... |
| Match: gi|3550467|emb|CAA06469.1| |
score: 132 |
e-value: 4e-29 |
Identity: 35.71% |
Span: 630bp (50.4%) |
Frame: 1 |
| gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 132 |
e-value: 8e-29 |
Identity: 40.61% |
Span: 495bp (39.6%) |
Frame: 1 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|118489133|gb|ABK96373.1| |
score: 130 |
e-value: 2e-28 |
Identity: 36.59% |
Span: 615bp (49.2%) |
Frame: 1 |
| unknown |
| Match: gi|157327300|emb|CAO15093.1| |
score: 129 |
e-value: 6e-28 |
Identity: 40.96% |
Span: 495bp (39.6%) |
Frame: 1 |
| unnamed |
| Match: gi|149391365|gb|ABR25700.1| |
score: 129 |
e-value: 5e-28 |
Identity: 35.71% |
Span: 630bp (50.4%) |
Frame: 1 |
| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|115480705|ref|NP_001063946.1| |
score: 129 |
e-value: 5e-28 |
Identity: 35.71% |
Span: 630bp (50.4%) |
Frame: 1 |
| Os09g0565200 [Oryza sativa (japonica cultivar-group)] >gi52076131|dbj|BAD46644.1| putative nucleic acid-binding prote... |
| Match: gi|15218972|ref|NP_176208.1| |
score: 129 |
e-value: 6e-28 |
Identity: 34.62% |
Span: 624bp (49.9%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|2443390|dbj|BAA22411.1| |
score: 129 |
e-value: 5e-28 |
Identity: 34.76% |
Span: 630bp (50.4%) |
Frame: 1 |
| gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|125564728|gb|EAZ10108.1| |
score: 128 |
e-value: 8e-28 |
Identity: 39.08% |
Span: 522bp (41.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|30693595|ref|NP_566958.3| |
score: 127 |
e-value: 2e-27 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| gi|30693595|ref|NP_566958.3| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|17979394|gb|AAL... |
| Match: gi|388621|gb|AAA33039.1| |
score: 127 |
e-value: 1e-27 |
Identity: 35.58% |
Span: 624bp (49.9%) |
Frame: 1 |
| RNA-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 127 |
e-value: 2e-27 |
Identity: 38.18% |
Span: 495bp (39.6%) |
Frame: 1 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|115477771|ref|NP_001062481.1| |
score: 126 |
e-value: 3e-27 |
Identity: 34.13% |
Span: 624bp (49.9%) |
Frame: 1 |
| Os08g0557100 |
| Match: gi|19032260|emb|CAD18921.1| |
score: 126 |
e-value: 3e-27 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 126 |
e-value: 3e-27 |
Identity: 40% |
Span: 495bp (39.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|448287|prf||1916407A |
score: 126 |
e-value: 3e-27 |
Identity: 100% |
Span: 186bp (14.9%) |
Frame: 1 |
| chloroplast |
| Match: gi|19032262|emb|CAD18922.1| |
score: 126 |
e-value: 4e-27 |
Identity: 37.58% |
Span: 495bp (39.6%) |
Frame: 1 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|125562527|gb|EAZ07975.1| |
score: 126 |
e-value: 3e-27 |
Identity: 34.13% |
Span: 624bp (49.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 125 |
e-value: 7e-27 |
Identity: 40% |
Span: 495bp (39.6%) |
Frame: 1 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|21309|emb|CAA41023.1| |
score: 125 |
e-value: 7e-27 |
Identity: 40% |
Span: 495bp (39.6%) |
Frame: 1 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|2330647|emb|CAA74889.1| |
score: 125 |
e-value: 7e-27 |
Identity: 41.21% |
Span: 495bp (39.6%) |
Frame: 1 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|115478330|ref|NP_001062760.1| |
score: 125 |
e-value: 5e-27 |
Identity: 36.02% |
Span: 615bp (49.2%) |
Frame: 1 |
| Os09g0279500 |
| Match: gi|510240|emb|CAA43420.1| |
score: 124 |
e-value: 2e-26 |
Identity: 33.81% |
Span: 630bp (50.4%) |
Frame: 1 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|118486956|gb|ABK95311.1| |
score: 124 |
e-value: 1e-26 |
Identity: 40% |
Span: 495bp (39.6%) |
Frame: 1 |
| unknown |
| Match: gi|147838354|emb|CAN61133.1| |
score: 124 |
e-value: 2e-26 |
Identity: 38.51% |
Span: 483bp (38.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|168274276|dbj|BAG09558.1| |
score: 124 |
e-value: 1e-26 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| chloroplast RNA binding protein [Mesembryanthemum crystallinum] |
| Match: gi|475719|gb|AAA18379.1| |
score: 124 |
e-value: 2e-26 |
Identity: 33.81% |
Span: 630bp (50.4%) |
Frame: 1 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|15294254|gb|AAK95304.1|AF410318_1 |
score: 124 |
e-value: 2e-26 |
Identity: 33.81% |
Span: 630bp (50.4%) |
Frame: 1 |
| AT4g24770/F22K18_30 [Arabidopsis thaliana] >gi23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] |
| Match: gi|157342097|emb|CAO64210.1| |
score: 124 |
e-value: 2e-26 |
Identity: 38.51% |
Span: 483bp (38.6%) |
Frame: 1 |
| unnamed |
| Match: gi|157345365|emb|CAO14663.1| |
score: 124 |
e-value: 1e-26 |
Identity: 39.39% |
Span: 495bp (39.6%) |
Frame: 1 |
| unnamed |
| Match: gi|162463757|ref|NP_001105347.1| |
score: 124 |
e-value: 2e-26 |
Identity: 33.95% |
Span: 624bp (49.9%) |
Frame: 1 |
| nucleic acid binding protein1 [Zea mays] >gi168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays] >gi|1956373... |
| Match: gi|88911212|gb|ABD58896.1| |
score: 124 |
e-value: 2e-26 |
Identity: 37.24% |
Span: 552bp (44.2%) |
Frame: 1 |
| chloroplast |
| Match: gi|88911212|gb|ABD58896.1| |
score: 85.1 |
e-value: 1e-14 |
Identity: 50.59% |
Span: 255bp (20.4%) |
Frame: 1 |
| chloroplast |
| Match: gi|475719|gb|AAA18379.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 48.81% |
Span: 246bp (19.7%) |
Frame: 1 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|510240|emb|CAA43420.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 48.81% |
Span: 246bp (19.7%) |
Frame: 1 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|162463757|ref|NP_001105347.1| |
score: 83.6 |
e-value: 3e-14 |
Identity: 50.6% |
Span: 246bp (19.7%) |
Frame: 1 |
| nucleic acid binding protein1 [Zea mays] >gi168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays] >gi|1956373... |
| Match: gi|15294254|gb|AAK95304.1|AF410318_1 |
score: 83.6 |
e-value: 3e-14 |
Identity: 48.81% |
Span: 246bp (19.7%) |
Frame: 1 |
| AT4g24770/F22K18_30 [Arabidopsis thaliana] >gi23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] |
| Match: gi|157342097|emb|CAO64210.1| |
score: 82.4 |
e-value: 7e-14 |
Identity: 49.35% |
Span: 231bp (18.5%) |
Frame: 1 |
| unnamed |
| Match: gi|157345365|emb|CAO14663.1| |
score: 82.4 |
e-value: 7e-14 |
Identity: 48.19% |
Span: 246bp (19.7%) |
Frame: 1 |
| unnamed |
| Match: gi|147838354|emb|CAN61133.1| |
score: 82.4 |
e-value: 7e-14 |
Identity: 49.35% |
Span: 231bp (18.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 81.6 |
e-value: 1e-13 |
Identity: 48.05% |
Span: 231bp (18.5%) |
Frame: 1 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 79.7 |
e-value: 4e-13 |
Identity: 49.35% |
Span: 231bp (18.5%) |
Frame: 1 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|19032260|emb|CAD18921.1| |
score: 79.7 |
e-value: 4e-13 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|118486956|gb|ABK95311.1| |
score: 79.7 |
e-value: 4e-13 |
Identity: 48.19% |
Span: 246bp (19.7%) |
Frame: 1 |
| unknown |
| Match: gi|21309|emb|CAA41023.1| |
score: 79.7 |
e-value: 4e-13 |
Identity: 49.35% |
Span: 231bp (18.5%) |
Frame: 1 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 79.3 |
e-value: 6e-13 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|2330647|emb|CAA74889.1| |
score: 79 |
e-value: 8e-13 |
Identity: 48.19% |
Span: 246bp (19.7%) |
Frame: 1 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|19032262|emb|CAD18922.1| |
score: 78.6 |
e-value: 1e-12 |
Identity: 48.19% |
Span: 246bp (19.7%) |
Frame: 1 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|125559266|gb|EAZ04802.1| |
score: 77 |
e-value: 3e-12 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| hypothetical protein OsI_26976 [Oryza sativa Indica Group] |
| Match: gi|116786296|gb|ABK24055.1| |
score: 77 |
e-value: 3e-12 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| unknown |
| Match: gi|116787606|gb|ABK24573.1| |
score: 77 |
e-value: 3e-12 |
Identity: 45.12% |
Span: 246bp (19.7%) |
Frame: 1 |
| unknown |
| Match: gi|116788830|gb|ABK25016.1| |
score: 77 |
e-value: 3e-12 |
Identity: 45.12% |
Span: 246bp (19.7%) |
Frame: 1 |
| unknown |
| Match: gi|149392545|gb|ABR26075.1| |
score: 77 |
e-value: 3e-12 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|115473531|ref|NP_001060364.1| |
score: 77 |
e-value: 3e-12 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| Os07g0631900 [Oryza sativa (japonica cultivar-group)] >gi22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A... |
| Match: gi|17432522|gb|AAL39067.1|AF389431_1 |
score: 76.6 |
e-value: 4e-12 |
Identity: 47.3% |
Span: 222bp (17.8%) |
Frame: 1 |
| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|168274276|dbj|BAG09558.1| |
score: 76.3 |
e-value: 5e-12 |
Identity: 45.45% |
Span: 231bp (18.5%) |
Frame: 1 |
| chloroplast RNA binding protein [Mesembryanthemum crystallinum] |
| Match: gi|157347527|emb|CAO18164.1| |
score: 73.2 |
e-value: 4e-11 |
Identity: 44.16% |
Span: 231bp (18.5%) |
Frame: 1 |
| unnamed |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 72.8 |
e-value: 5e-11 |
Identity: 49.3% |
Span: 213bp (17.0%) |
Frame: 1 |
| hypothetical |
|
| 209 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 63 hits recorded |
| Match: At3G52380.1 |
score: 263 |
e-value: 2e-70 |
Identity: 61.54% |
Span: 657bp (52.6%) |
Frame: 1 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At2G37220.1 |
score: 137 |
e-value: 1e-32 |
Identity: 39.43% |
Span: 495bp (39.6%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At1G60000.1 |
score: 129 |
e-value: 5e-30 |
Identity: 34.62% |
Span: 624bp (49.9%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At3G52150.2 |
score: 127 |
e-value: 2e-29 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.1 |
score: 127 |
e-value: 2e-29 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At4G24770.1 |
score: 124 |
e-value: 1e-28 |
Identity: 33.81% |
Span: 630bp (50.4%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G53460.2 |
score: 121 |
e-value: 1e-27 |
Identity: 35.85% |
Span: 495bp (39.6%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At5G50250.1 |
score: 120 |
e-value: 2e-27 |
Identity: 38.79% |
Span: 495bp (39.6%) |
Frame: 1 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At2G35410.1 |
score: 113 |
e-value: 2e-25 |
Identity: 37.43% |
Span: 558bp (44.6%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G01080.1 |
score: 111 |
e-value: 1e-24 |
Identity: 39.26% |
Span: 480bp (38.4%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At1G01080.2 |
score: 108 |
e-value: 5e-24 |
Identity: 39.63% |
Span: 480bp (38.4%) |
Frame: 1 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At4G24770.1 |
score: 83.6 |
e-value: 2e-16 |
Identity: 48.81% |
Span: 246bp (19.7%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G16380.1 |
score: 82.4 |
e-value: 5e-16 |
Identity: 34.52% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G49760.1 |
score: 82 |
e-value: 7e-16 |
Identity: 28.49% |
Span: 537bp (43.0%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G23350.1 |
score: 81.3 |
e-value: 1e-15 |
Identity: 26.82% |
Span: 537bp (43.0%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At3G53460.1 |
score: 79.3 |
e-value: 4e-15 |
Identity: 48.65% |
Span: 222bp (17.8%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At5G06210.1 |
score: 77 |
e-value: 2e-14 |
Identity: 46.67% |
Span: 225bp (18.0%) |
Frame: 1 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At3G07810.2 |
score: 76.6 |
e-value: 3e-14 |
Identity: 30.3% |
Span: 486bp (38.9%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 76.6 |
e-value: 3e-14 |
Identity: 30.3% |
Span: 486bp (38.9%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At3G19130.1 |
score: 76.3 |
e-value: 4e-14 |
Identity: 29.34% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At5G50250.1 |
score: 74.7 |
e-value: 1e-13 |
Identity: 46.75% |
Span: 231bp (18.5%) |
Frame: 1 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At2G23350.1 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.33% |
Span: 498bp (39.8%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At5G55550.2 |
score: 73.9 |
e-value: 2e-13 |
Identity: 28.92% |
Span: 486bp (38.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.3 |
score: 73.9 |
e-value: 2e-13 |
Identity: 28.92% |
Span: 486bp (38.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.1 |
score: 73.9 |
e-value: 2e-13 |
Identity: 28.92% |
Span: 486bp (38.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At4G09040.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 27.78% |
Span: 483bp (38.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797312 REVERSE |
| Match: At2G18510.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.88% |
Span: 489bp (39.1%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At4G09040.2 |
score: 73.2 |
e-value: 3e-13 |
Identity: 27.78% |
Span: 483bp (38.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797190 REVERSE |
| Match: At5G54900.1 |
score: 72.4 |
e-value: 5e-13 |
Identity: 25.6% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At3G53460.1 |
score: 72 |
e-value: 7e-13 |
Identity: 41.18% |
Span: 249bp (19.9%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.2 |
score: 72 |
e-value: 7e-13 |
Identity: 41.18% |
Span: 249bp (19.9%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G26650.1 |
score: 71.6 |
e-value: 9e-13 |
Identity: 27.91% |
Span: 486bp (38.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At4G26650.2 |
score: 71.6 |
e-value: 9e-13 |
Identity: 27.91% |
Span: 486bp (38.9%) |
Frame: 1 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At3G13224.1 |
score: 71.6 |
e-value: 9e-13 |
Identity: 25.93% |
Span: 558bp (44.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At2G36660.1 |
score: 71.6 |
e-value: 9e-13 |
Identity: 29.94% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At3G13224.2 |
score: 70.9 |
e-value: 2e-12 |
Identity: 26.9% |
Span: 504bp (40.3%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At1G17640.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 27.85% |
Span: 474bp (37.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
| Match: At2G37220.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 40.51% |
Span: 237bp (19.0%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G16380.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 32.52% |
Span: 489bp (39.1%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G54080.1 |
score: 70.1 |
e-value: 3e-12 |
Identity: 29.88% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At5G61030.1 |
score: 70.1 |
e-value: 3e-12 |
Identity: 44% |
Span: 225bp (18.0%) |
Frame: 1 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G53460.1 |
score: 69.7 |
e-value: 4e-12 |
Identity: 46.15% |
Span: 195bp (15.6%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At2G23350.1 |
score: 69.7 |
e-value: 4e-12 |
Identity: 31.36% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G49760.1 |
score: 68.9 |
e-value: 6e-12 |
Identity: 31.14% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G47620.2 |
score: 68.6 |
e-value: 8e-12 |
Identity: 29.45% |
Span: 483bp (38.6%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At1G71770.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 28.48% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G17370.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 29.19% |
Span: 483bp (38.6%) |
Frame: 1 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At5G47620.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 29.45% |
Span: 483bp (38.6%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At3G14100.1 |
score: 67.8 |
e-value: 1e-11 |
Identity: 29.88% |
Span: 492bp (39.4%) |
Frame: 1 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At5G19350.2 |
score: 67.8 |
e-value: 1e-11 |
Identity: 23.03% |
Span: 492bp (39.4%) |
Frame: 1 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At1G11650.2 |
score: 67.8 |
e-value: 1e-11 |
Identity: 25.15% |
Span: 498bp (39.8%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At5G19350.1 |
score: 67.8 |
e-value: 1e-11 |
Identity: 23.03% |
Span: 492bp (39.4%) |
Frame: 1 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At1G11650.1 |
score: 67.8 |
e-value: 1e-11 |
Identity: 25.15% |
Span: 498bp (39.8%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917301 FORWARD |
| Match: At3G55340.1 |
score: 67.4 |
e-value: 2e-11 |
Identity: 25.84% |
Span: 504bp (40.3%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:20526649-20528809 FORWARD |
| Match: At1G71770.1 |
score: 67.4 |
e-value: 2e-11 |
Identity: 26.83% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At3G26420.1 |
score: 67 |
e-value: 2e-11 |
Identity: 45.45% |
Span: 198bp (15.8%) |
Frame: 1 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At1G54080.2 |
score: 66.6 |
e-value: 3e-11 |
Identity: 29.17% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At1G74230.1 |
score: 66.2 |
e-value: 4e-11 |
Identity: 44% |
Span: 225bp (18.0%) |
Frame: 1 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At1G22760.1 |
score: 66.2 |
e-value: 4e-11 |
Identity: 27.88% |
Span: 492bp (39.4%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At4G13860.1 |
score: 65.9 |
e-value: 5e-11 |
Identity: 46.58% |
Span: 219bp (17.5%) |
Frame: 1 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At2G21660.2 |
score: 65.1 |
e-value: 9e-11 |
Identity: 43.94% |
Span: 198bp (15.8%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
| Match: At5G40490.1 |
score: 65.1 |
e-value: 9e-11 |
Identity: 26.79% |
Span: 504bp (40.3%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At2G21660.1 |
score: 65.1 |
e-value: 9e-11 |
Identity: 43.94% |
Span: 198bp (15.8%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
|
