All Stored BLAST annotations for SGN-U579909
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157350511|emb|CAO40560.1| score: 624 e-value: 5e-177 Identity: 79.15% Span: 1182bp (98.9%) Frame: 2
unnamed
Match: gi|147795953|emb|CAN60862.1| score: 557 e-value: 8e-157 Identity: 72.36% Span: 1182bp (98.9%) Frame: 2
hypothetical protein [Vitis vinifera]
Match: gi|18379230|ref|NP_563700.1| score: 516 e-value: 1e-144 Identity: 64.93% Span: 1194bp (99.9%) Frame: 2
PRP39; binding [Arabidopsis thaliana] >gi15810565|gb|AAL07170.1| unknown protein [Arabidopsis thaliana] >gi|20259567|...
Match: gi|3142300|gb|AAC16751.1| score: 516 e-value: 1e-144 Identity: 64.93% Span: 1194bp (99.9%) Frame: 2
Contains similarity to pre-mRNA processing protein PRP39 gbL29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, ...
Match: gi|115451479|ref|NP_001049340.1| score: 422 e-value: 2e-116 Identity: 54.73% Span: 1161bp (97.2%) Frame: 2
Os03g0210400 [Oryza sativa (japonica cultivar-group)] >gi108706795|gb|ABF94590.1| Pre-mRNA processing protein prp39, ...
Match: gi|218192314|gb|EEC74741.1| score: 417 e-value: 9e-115 Identity: 54.22% Span: 1161bp (97.2%) Frame: 2
hypothetical protein OsI_10482 [Oryza sativa Indica Group]
Match: gi|125585357|gb|EAZ26021.1| score: 414 e-value: 6e-114 Identity: 53.37% Span: 1161bp (97.2%) Frame: 2
hypothetical
Match: gi|168021369|ref|XP_001763214.1| score: 351 e-value: 6e-95 Identity: 48.38% Span: 1164bp (97.4%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162685697|gb|EDQ72091.1| predicted protein [Physcomitrella...
Match: gi|168010656|ref|XP_001758020.1| score: 341 e-value: 8e-92 Identity: 47.13% Span: 1164bp (97.4%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162690897|gb|EDQ77262.1| predicted protein [Physcomitrella...
Match: gi|168042206|ref|XP_001773580.1| score: 320 e-value: 1e-85 Identity: 45.3% Span: 1176bp (98.4%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162675119|gb|EDQ61618.1| predicted protein [Physcomitrella...
Match: gi|157358996|emb|CAO66898.1| score: 279 e-value: 3e-73 Identity: 45.82% Span: 897bp (75.1%) Frame: 2
unnamed
Match: gi|30694946|ref|NP_199452.2| score: 248 e-value: 7e-64 Identity: 42.72% Span: 924bp (77.3%) Frame: 2
PRP39-2 [Arabidopsis thaliana]
Match: gi|10177721|dbj|BAB11095.1| score: 248 e-value: 7e-64 Identity: 42.72% Span: 924bp (77.3%) Frame: 2
unnamed protein product [Arabidopsis thaliana]
Match: gi|125603242|gb|EAZ42567.1| score: 240 e-value: 2e-61 Identity: 36.71% Span: 1038bp (86.9%) Frame: 2
hypothetical
Match: gi|115476184|ref|NP_001061688.1| score: 240 e-value: 2e-61 Identity: 36.71% Span: 1038bp (86.9%) Frame: 2
Os08g0379000 [Oryza sativa (japonica cultivar-group)] >gi40253455|dbj|BAD05406.1| unknown protein [Oryza sativa Japon...
Match: gi|102139749|gb|ABF69956.1| score: 239 e-value: 3e-61 Identity: 39.8% Span: 882bp (73.8%) Frame: 2
pre-mRNA processing protein-related [Musa acuminata]
Match: gi|218201077|gb|EEC83504.1| score: 239 e-value: 5e-61 Identity: 36.44% Span: 1038bp (86.9%) Frame: 2
hypothetical protein OsI_29060 [Oryza sativa Indica Group]
Match: gi|147782546|emb|CAN77301.1| score: 184 e-value: 2e-44 Identity: 42.49% Span: 606bp (50.7%) Frame: 2
hypothetical
Match: gi|159482238|ref|XP_001699178.1| score: 181 e-value: 1e-43 Identity: 38.93% Span: 837bp (70.0%) Frame: 2
nuclear
Match: gi|219410822|ref|XP_002203224.1| score: 153 e-value: 3e-35 Identity: 31.35% Span: 1128bp (94.4%) Frame: 2
hypothetical
Match: gi|219410792|ref|XP_002203209.1| score: 152 e-value: 7e-35 Identity: 31.09% Span: 1128bp (94.4%) Frame: 2
hypothetical
Match: gi|156361086|ref|XP_001625351.1| score: 152 e-value: 6e-35 Identity: 33.44% Span: 945bp (79.1%) Frame: 2
predicted
Match: gi|91086167|ref|XP_970329.1| score: 150 e-value: 2e-34 Identity: 30.87% Span: 1119bp (93.6%) Frame: 2
PREDICTED:
Match: gi|212509867|gb|EEB13153.1| score: 149 e-value: 6e-34 Identity: 29.82% Span: 1089bp (91.1%) Frame: 2
pre-mRNA-splicing
Match: gi|212509866|gb|EEB13152.1| score: 149 e-value: 6e-34 Identity: 29.82% Span: 1089bp (91.1%) Frame: 2
pre-mRNA-splicing
Match: gi|94573493|gb|AAI16541.1| score: 147 e-value: 1e-33 Identity: 29.8% Span: 1155bp (96.7%) Frame: 2
PRP39
Match: gi|52218898|ref|NP_001004520.1| score: 147 e-value: 1e-33 Identity: 29.8% Span: 1155bp (96.7%) Frame: 2
PRP39
Match: gi|56788871|gb|AAH88586.1| score: 146 e-value: 3e-33 Identity: 31.49% Span: 1059bp (88.6%) Frame: 2
Prpf39-prov
Match: gi|171846532|gb|AAI61797.1| score: 145 e-value: 5e-33 Identity: 31.49% Span: 1059bp (88.6%) Frame: 2
Prpf39
Match: gi|157954079|ref|NP_001103259.1| score: 145 e-value: 5e-33 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PRP39
Match: gi|147906238|ref|NP_001089580.1| score: 145 e-value: 7e-33 Identity: 30.7% Span: 1056bp (88.4%) Frame: 2
hypothetical
Match: gi|126282451|ref|XP_001368787.1| score: 144 e-value: 2e-32 Identity: 29.01% Span: 1128bp (94.4%) Frame: 2
PREDICTED:
Match: gi|156546468|ref|XP_001607328.1| score: 144 e-value: 2e-32 Identity: 28.89% Span: 1149bp (96.2%) Frame: 2
PREDICTED:
Match: gi|126282454|ref|XP_001368823.1| score: 144 e-value: 2e-32 Identity: 29.01% Span: 1128bp (94.4%) Frame: 2
PREDICTED:
Match: gi|73962819|ref|XP_851059.1| score: 144 e-value: 2e-32 Identity: 29.68% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|73962831|ref|XP_863155.1| score: 144 e-value: 2e-32 Identity: 29.68% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|194034405|ref|XP_001927155.1| score: 144 e-value: 2e-32 Identity: 29.77% Span: 1128bp (94.4%) Frame: 2
PREDICTED:
Match: gi|114652845|ref|XP_001150809.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|119586191|gb|EAW65787.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PRP39
Match: gi|30704561|gb|AAH51886.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
gi|30704561|gb|AAH51886.1| PRPF39 protein [Homo sapiens]
Match: gi|114652851|ref|XP_001150873.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|114652847|ref|XP_001150946.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|114652843|ref|XP_001151081.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PREDICTED:
Match: gi|115529045|gb|AAI25127.1| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PRPF39
Match: gi|156938331|ref|NP_060392.3| score: 143 e-value: 3e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
PRP39
Match: gi|118597488|sp|Q86UA1|PRP39_HUMAN score: 142 e-value: 6e-32 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
Pre-mRNA-processing
Match: gi|156546892|ref|NP_808474.2| score: 141 e-value: 1e-31 Identity: 29.69% Span: 1032bp (86.4%) Frame: 2
PRP39
Match: gi|194207328|ref|XP_001493495.2| score: 140 e-value: 3e-31 Identity: 29.52% Span: 1128bp (94.4%) Frame: 2
PREDICTED:
Match: gi|66509338|ref|XP_392380.2| score: 140 e-value: 2e-31 Identity: 28.19% Span: 1161bp (97.2%) Frame: 2
PREDICTED:
Match: gi|119586192|gb|EAW65788.1| score: 139 e-value: 6e-31 Identity: 30.5% Span: 1020bp (85.4%) Frame: 2
PRP39
Match: gi|149410459|ref|XP_001514648.1| score: 139 e-value: 5e-31 Identity: 27.72% Span: 1128bp (94.4%) Frame: 2
PREDICTED:
Match: gi|118597489|sp|Q8K2Z2|PRP39_MOUSE score: 136 e-value: 4e-30 Identity: 29.41% Span: 1032bp (86.4%) Frame: 2
Pre-mRNA-processing
Match: gi|73962829|ref|XP_863129.1| score: 135 e-value: 9e-30 Identity: 32.31% Span: 774bp (64.8%) Frame: 2
PREDICTED:
Match: gi|118142863|gb|AAH14689.1| score: 132 e-value: 8e-29 Identity: 31.82% Span: 786bp (65.8%) Frame: 2
Prpf39
Match: gi|193586999|ref|XP_001951723.1| score: 132 e-value: 5e-29 Identity: 28.5% Span: 1083bp (90.6%) Frame: 2
PREDICTED:
Match: gi|47225250|emb|CAG09750.1| score: 130 e-value: 2e-28 Identity: 32.85% Span: 747bp (62.5%) Frame: 2
gi|47225250|emb|CAG09750.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|198450134|ref|XP_002137035.1| score: 130 e-value: 3e-28 Identity: 27.79% Span: 1146bp (95.9%) Frame: 2
GA26805
Match: gi|115920183|ref|XP_793456.2| score: 130 e-value: 2e-28 Identity: 29.89% Span: 1032bp (86.4%) Frame: 2
PREDICTED:
Match: gi|195445878|ref|XP_002070524.1| score: 130 e-value: 2e-28 Identity: 29.39% Span: 1026bp (85.9%) Frame: 2
GK12105
Match: gi|195158443|ref|XP_002020095.1| score: 130 e-value: 3e-28 Identity: 27.79% Span: 1146bp (95.9%) Frame: 2
GL13803
Match: gi|157137954|ref|XP_001664092.1| score: 128 e-value: 1e-27 Identity: 25.38% Span: 1134bp (94.9%) Frame: 2
hypothetical
Match: gi|195390642|ref|XP_002053977.1| score: 128 e-value: 9e-28 Identity: 28.41% Span: 1014bp (84.9%) Frame: 2
GJ23047
Match: gi|195112804|ref|XP_002000962.1| score: 128 e-value: 1e-27 Identity: 26.87% Span: 1089bp (91.1%) Frame: 2
GI22241
Match: gi|195054118|ref|XP_001993973.1| score: 128 e-value: 1e-27 Identity: 25.94% Span: 1068bp (89.4%) Frame: 2
GH22424
Match: gi|194745195|ref|XP_001955074.1| score: 127 e-value: 3e-27 Identity: 27.58% Span: 1059bp (88.6%) Frame: 2
GF18589
Match: gi|193575607|ref|XP_001951289.1| score: 127 e-value: 1e-27 Identity: 29.43% Span: 930bp (77.8%) Frame: 2
PREDICTED:
Match: gi|195503487|ref|XP_002098673.1| score: 126 e-value: 3e-27 Identity: 28.02% Span: 1167bp (97.7%) Frame: 2
GE23802
Match: gi|196011786|ref|XP_002115756.1| score: 125 e-value: 7e-27 Identity: 31.27% Span: 1059bp (88.6%) Frame: 2
hypothetical
Match: gi|164427153|ref|XP_001728367.1| score: 124 e-value: 1e-26 Identity: 28.21% Span: 945bp (79.1%) Frame: 2
hypothetical
Match: gi|189193715|ref|XP_001933196.1| score: 122 e-value: 6e-26 Identity: 33.33% Span: 738bp (61.8%) Frame: 2
pre-mRNA-processing
Match: gi|45551993|ref|NP_733256.2| score: 122 e-value: 6e-26 Identity: 27.51% Span: 1059bp (88.6%) Frame: 2
gi|45551993|ref|NP_733256.2| CG1646-PB [Drosophila melanogaster] >gi|45446691|gb|AAN14302.2| CG1646-PB [Drosophila me...
Match: gi|195341030|ref|XP_002037115.1| score: 122 e-value: 5e-26 Identity: 26.72% Span: 1059bp (88.6%) Frame: 2
GM12738
Match: gi|169773371|ref|XP_001821154.1| score: 122 e-value: 8e-26 Identity: 26.8% Span: 1053bp (88.1%) Frame: 2
hypothetical
Match: gi|45552111|ref|NP_788754.2| score: 122 e-value: 6e-26 Identity: 27.51% Span: 1059bp (88.6%) Frame: 2
gi|45552111|ref|NP_788754.2| CG1646-PD [Drosophila melanogaster] >gi|45446692|gb|AAO41608.2| CG1646-PD [Drosophila me...
Match: gi|21357975|ref|NP_651634.1| score: 122 e-value: 6e-26 Identity: 27.51% Span: 1059bp (88.6%) Frame: 2
gi|21357975|ref|NP_651634.1| CG1646-PA [Drosophila melanogaster] gi|24650869|ref|NP_733256.1| CG1646-PB [Drosophila m...
Match: gi|194906795|ref|XP_001981431.1| score: 122 e-value: 6e-26 Identity: 27.34% Span: 1116bp (93.4%) Frame: 2
GG11615
Match: gi|218717072|gb|EED16493.1| score: 121 e-value: 1e-25 Identity: 26.16% Span: 1080bp (90.4%) Frame: 2
mRNA
Match: gi|46108724|ref|XP_381420.1| score: 121 e-value: 1e-25 Identity: 28.7% Span: 966bp (80.8%) Frame: 2
gi|46108724|ref|XP_381420.1| hypothetical protein FG01244.1 [Gibberella zeae PH-1] >gi|42545262|gb|EAA68105.1| hypoth...
Match: gi|161078723|ref|NP_001097959.1| score: 121 e-value: 1e-25 Identity: 28.67% Span: 873bp (73.1%) Frame: 2
CG1646
Match: gi|170040001|ref|XP_001847803.1| score: 120 e-value: 2e-25 Identity: 24.16% Span: 1134bp (94.9%) Frame: 2
PRPF39
Match: gi|198435336|ref|XP_002123360.1| score: 120 e-value: 2e-25 Identity: 26.17% Span: 1140bp (95.4%) Frame: 2
PREDICTED:
Match: gi|195574558|ref|XP_002105252.1| score: 120 e-value: 2e-25 Identity: 26.46% Span: 1059bp (88.6%) Frame: 2
GD21382
Match: gi|145603027|ref|XP_362113.2| score: 119 e-value: 7e-25 Identity: 30.21% Span: 843bp (70.5%) Frame: 2
hypothetical
Match: gi|115397803|ref|XP_001214493.1| score: 119 e-value: 5e-25 Identity: 26.81% Span: 1083bp (90.6%) Frame: 2
conserved
Match: gi|145257493|ref|XP_001401757.1| score: 118 e-value: 1e-24 Identity: 27.33% Span: 972bp (81.3%) Frame: 2
hypothetical
Match: gi|119500730|ref|XP_001267122.1| score: 118 e-value: 9e-25 Identity: 28.34% Span: 915bp (76.6%) Frame: 2
conserved
Match: gi|70994154|ref|XP_751924.1| score: 118 e-value: 1e-24 Identity: 28.34% Span: 915bp (76.6%) Frame: 2
hypothetical
Match: gi|212540620|ref|XP_002150465.1| score: 118 e-value: 1e-24 Identity: 33.65% Span: 618bp (51.7%) Frame: 2
mRNA
Match: gi|121707303|ref|XP_001271793.1| score: 117 e-value: 3e-24 Identity: 25.7% Span: 1053bp (88.1%) Frame: 2
DEAD/DEAH
Match: gi|154298997|ref|XP_001549919.1| score: 115 e-value: 1e-23 Identity: 27% Span: 990bp (82.8%) Frame: 2
hypothetical
Match: gi|156058077|ref|XP_001594962.1| score: 115 e-value: 6e-24 Identity: 27% Span: 990bp (82.8%) Frame: 2
hypothetical
Match: gi|171695982|ref|XP_001912915.1| score: 115 e-value: 6e-24 Identity: 27.07% Span: 936bp (78.3%) Frame: 2
unnamed
Match: gi|19113218|ref|NP_596426.1| score: 115 e-value: 6e-24 Identity: 33.06% Span: 687bp (57.5%) Frame: 2
gi|19113218|ref|NP_596426.1| possible pre-mRNA processing by similarity to yeast prp39 [Schizosaccharomyces pombe] gi...
Match: gi|213401169|ref|XP_002171357.1| score: 114 e-value: 2e-23 Identity: 31.02% Span: 687bp (57.5%) Frame: 2
pre-mRNA-processing
Match: gi|67522356|ref|XP_659239.1| score: 114 e-value: 2e-23 Identity: 30.74% Span: 672bp (56.2%) Frame: 2
hypothetical
Match: gi|116181880|ref|XP_001220789.1| score: 113 e-value: 4e-23 Identity: 26.77% Span: 924bp (77.3%) Frame: 2
hypothetical
Match: gi|211586916|emb|CAP94569.1| score: 112 e-value: 6e-23 Identity: 27.44% Span: 936bp (78.3%) Frame: 2
Pc18g03450
Match: gi|169601266|ref|XP_001794055.1| score: 107 e-value: 2e-21 Identity: 31.69% Span: 726bp (60.8%) Frame: 2
hypothetical
Match: gi|170594535|ref|XP_001902019.1| score: 107 e-value: 2e-21 Identity: 38% Span: 435bp (36.4%) Frame: 2
PRPF39
Match: gi|66810898|ref|XP_639156.1| score: 98.6 e-value: 1e-18 Identity: 26.51% Span: 708bp (59.2%) Frame: 2
hypothetical

12 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At1G04080.1 score: 516 e-value: 8e-147 Identity: 64.93% Span: 1194bp (99.9%) Frame: 2
hydroxyproline-rich glycoprotein family protein | chr1:1051802-1056549 FORWARD
Match: At5G46400.1 score: 248 e-value: 5e-66 Identity: 42.72% Span: 924bp (77.3%) Frame: 2
binding | chr5:18837259-18841749 FORWARD

swissprot [blastx] Showing best 5 hits recorded
Match: Q1JPZ7 score: 147 e-value: 9e-35 Identity: 29.8% Span: 1155bp (96.7%) Frame: 2
Pre-mRNA-processing factor 39 OS=Danio rerio GN=prpf39 PE=2 SV=2
Match: Q4KLU2 score: 145 e-value: 4e-34 Identity: 30.7% Span: 1056bp (88.4%) Frame: 2
Pre-mRNA-processing factor 39 OS=Xenopus laevis GN=prpf39 PE=2 SV=1
Match: Q86UA1 score: 142 e-value: 4e-33 Identity: 29.95% Span: 1113bp (93.1%) Frame: 2
Pre-mRNA-processing factor 39 OS=Homo sapiens GN=PRPF39 PE=1 SV=3
Match: Q8K2Z2 score: 136 e-value: 3e-31 Identity: 29.41% Span: 1032bp (86.4%) Frame: 2
Pre-mRNA-processing factor 39 OS=Mus musculus GN=Prpf39 PE=2 SV=3
Match: O74970 score: 115 e-value: 4e-25 Identity: 33.06% Span: 687bp (57.5%) Frame: 2
Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe GN=prp39 PE=2 SV=1