| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|94466657|emb|CAJ44457.1| |
score: 305 |
e-value: 9e-81 |
Identity: 79.05% |
Span: 741bp (62.1%) |
Frame: 1 |
| ALY protein [Nicotiana benthamiana] |
| Match: gi|51490663|emb|CAG26902.1| |
score: 303 |
e-value: 2e-80 |
Identity: 78.26% |
Span: 741bp (62.1%) |
Frame: 1 |
| ALY protein [Nicotiana benthamiana] |
| Match: gi|225435024|ref|XP_002284215.1| |
score: 231 |
e-value: 2e-58 |
Identity: 61.11% |
Span: 741bp (62.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270227438|emb|CBI16171.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255581121|ref|XP_002531375.1| |
score: 230 |
e-value: 3e-58 |
Identity: 58.82% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor binding protein, putative [Ricinus communis] >gi223529035|gb|EEF31023.1| RNA and export factor ... |
| Match: gi|51490665|emb|CAG26903.1| |
score: 220 |
e-value: 3e-55 |
Identity: 57.65% |
Span: 732bp (61.4%) |
Frame: 1 |
| ALY protein [Nicotiana benthamiana] |
| Match: gi|224059518|ref|XP_002299886.1| |
score: 212 |
e-value: 8e-53 |
Identity: 55.06% |
Span: 738bp (61.9%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222847144|gb|EEE84691.1| predicted protein [Populus trichocarpa] |
| Match: gi|147843918|emb|CAN83715.1| |
score: 211 |
e-value: 1e-52 |
Identity: 61.66% |
Span: 567bp (47.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|9757916|dbj|BAB08363.1| |
score: 199 |
e-value: 7e-49 |
Identity: 51.82% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor binding protein 2-I-like protein [Arabidopsis thaliana] |
| Match: gi|30697310|ref|NP_851229.1| |
score: 197 |
e-value: 2e-48 |
Identity: 52% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor-binding protein, putative [Arabidopsis thaliana] >gi22531190|gb|AAM97099.1| transcriptional coa... |
| Match: gi|42573738|ref|NP_974965.1| |
score: 196 |
e-value: 5e-48 |
Identity: 51.81% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|21555029|gb|AAM63758.1| |
score: 196 |
e-value: 5e-48 |
Identity: 53.01% |
Span: 738bp (61.9%) |
Frame: 1 |
| transcriptional coactivator-like protein [Arabidopsis thaliana] |
| Match: gi|226503573|ref|NP_001145994.1| |
score: 192 |
e-value: 9e-47 |
Identity: 51.98% |
Span: 732bp (61.4%) |
Frame: 1 |
| hypothetical protein LOC100279524 [Zea mays] >gi195619398|gb|ACG31529.1| THO complex subunit 4 [Zea mays] >gi|1956247... |
| Match: gi|242036141|ref|XP_002465465.1| |
score: 191 |
e-value: 1e-46 |
Identity: 52.16% |
Span: 732bp (61.4%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor] >gi241919319|gb|EER92463.1| hypothetical protein SORBIDRA... |
| Match: gi|195637864|gb|ACG38400.1| |
score: 190 |
e-value: 3e-46 |
Identity: 50.8% |
Span: 732bp (61.4%) |
Frame: 1 |
| THO complex subunit 4 [Zea mays] |
| Match: gi|194703592|gb|ACF85880.1| |
score: 190 |
e-value: 3e-46 |
Identity: 51.39% |
Span: 732bp (61.4%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|125543328|gb|EAY89467.1| |
score: 185 |
e-value: 1e-44 |
Identity: 52.79% |
Span: 732bp (61.4%) |
Frame: 1 |
| hypothetical protein OsI_10999 [Oryza sativa Indica Group] |
| Match: gi|115452249|ref|NP_001049725.1| |
score: 185 |
e-value: 1e-44 |
Identity: 52.42% |
Span: 732bp (61.4%) |
Frame: 1 |
| Os03g0278300 [Oryza sativa (japonica cultivar-group)] >gi108707486|gb|ABF95281.1| RNA and export factor-binding prote... |
| Match: gi|186532595|ref|NP_001119461.1| |
score: 183 |
e-value: 1e-44 |
Identity: 56.54% |
Span: 570bp (47.8%) |
Frame: 1 |
| RNA and export factor-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|224113973|ref|XP_002332459.1| |
score: 178 |
e-value: 1e-42 |
Identity: 68.1% |
Span: 483bp (40.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222832494|gb|EEE70971.1| predicted protein [Populus trichocarpa] |
| Match: gi|167999562|ref|XP_001752486.1| |
score: 178 |
e-value: 1e-42 |
Identity: 49.03% |
Span: 738bp (61.9%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162696386|gb|EDQ82725.1| predicted protein [Physcomitrella... |
| Match: gi|255674403|dbj|BAF11639.2| |
score: 177 |
e-value: 2e-42 |
Identity: 58.91% |
Span: 555bp (46.5%) |
Frame: 1 |
| Os03g0278300 [Oryza sativa Japonica Group] |
| Match: gi|30679669|ref|NP_195873.2| |
score: 177 |
e-value: 2e-42 |
Identity: 58.73% |
Span: 525bp (44.0%) |
Frame: 1 |
| RNA and export factor-binding protein, putative [Arabidopsis thaliana] >gi22655123|gb|AAM98152.1| putative protein [A... |
| Match: gi|7413642|emb|CAB85990.1| |
score: 177 |
e-value: 2e-42 |
Identity: 58.73% |
Span: 525bp (44.0%) |
Frame: 1 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|223944243|gb|ACN26205.1| |
score: 175 |
e-value: 1e-41 |
Identity: 57.14% |
Span: 537bp (45.0%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|186532595|ref|NP_001119461.1| |
score: 21.6 |
e-value: 1e-44 |
Identity: 37.5% |
Span: 48bp (4.0%) |
Frame: 3 |
| RNA and export factor-binding protein, putative [Arabidopsis thaliana] |
|
| 163 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At5G59950.1 |
score: 197 |
e-value: 8e-51 |
Identity: 52% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157461-24158730 FORWARD |
| Match: At5G59950.3 |
score: 196 |
e-value: 2e-50 |
Identity: 51.81% |
Span: 738bp (61.9%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157461-24158730 FORWARD |
| Match: At5G02530.1 |
score: 177 |
e-value: 1e-44 |
Identity: 58.73% |
Span: 525bp (44.0%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:564330-565774 REVERSE |
| Match: At5G59950.2 |
score: 162 |
e-value: 4e-40 |
Identity: 53.63% |
Span: 528bp (44.3%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157855-24158730 FORWARD |
| Match: At5G37720.2 |
score: 130 |
e-value: 2e-30 |
Identity: 41.27% |
Span: 552bp (46.3%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:14999035-15001208 REVERSE |
| Match: At5G37720.1 |
score: 130 |
e-value: 2e-30 |
Identity: 41.27% |
Span: 552bp (46.3%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:14999035-15001208 REVERSE |
| Match: At1G66260.1 |
score: 119 |
e-value: 5e-27 |
Identity: 53.92% |
Span: 306bp (25.6%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr1:24699558-24701546 REVERSE |
| Match: At2G37220.1 |
score: 65.5 |
e-value: 6e-11 |
Identity: 33.33% |
Span: 339bp (28.4%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: Q9JJW6 |
score: 125 |
e-value: 8e-28 |
Identity: 42.05% |
Span: 525bp (44.0%) |
Frame: 1 |
| RNA and export factor-binding protein 2 OS=Mus musculus GN=Refbp2 PE=1 SV=1 |
| Match: B5FXN8 |
score: 121 |
e-value: 9e-27 |
Identity: 53.72% |
Span: 357bp (29.9%) |
Frame: 1 |
| THO complex subunit 4 OS=Taeniopygia guttata GN=THOC4 PE=2 SV=1 |
| Match: Q28FB9 |
score: 120 |
e-value: 2e-26 |
Identity: 51.18% |
Span: 375bp (31.4%) |
Frame: 1 |
| THO complex subunit 4 OS=Xenopus tropicalis GN=thoc4 PE=2 SV=1 |
| Match: O08583 |
score: 120 |
e-value: 2e-26 |
Identity: 52.89% |
Span: 357bp (29.9%) |
Frame: 1 |
| THO complex subunit 4 OS=Mus musculus GN=Thoc4 PE=1 SV=3 |
| Match: Q86V81 |
score: 120 |
e-value: 2e-26 |
Identity: 52.89% |
Span: 357bp (29.9%) |
Frame: 1 |
| THO complex subunit 4 OS=Homo sapiens GN=THOC4 PE=1 SV=3 |
| Match: Q3T0I4 |
score: 120 |
e-value: 2e-26 |
Identity: 52.89% |
Span: 357bp (29.9%) |
Frame: 1 |
| THO complex subunit 4 OS=Bos taurus GN=THOC4 PE=2 SV=1 |
| Match: Q58EA2 |
score: 118 |
e-value: 7e-26 |
Identity: 50.39% |
Span: 375bp (31.4%) |
Frame: 1 |
| THO complex subunit 4-A OS=Xenopus laevis GN=thoc4-A PE=2 SV=1 |
| Match: Q6GLW1 |
score: 118 |
e-value: 9e-26 |
Identity: 38.28% |
Span: 714bp (59.8%) |
Frame: 1 |
| THO complex subunit 4-B OS=Xenopus laevis GN=thoc4-B PE=2 SV=1 |
|
