| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At3G11400.1 |
score: 393 |
e-value: 9e-110 |
Identity: 69.69% |
Span: 858bp (74.4%) |
Frame: 1 |
| Symbols: ATEIF3G1, EIF3G1 | EIF3G1 (eukaryotic translation initiation factor 3G1); RNA binding / translation initiat... |
| Match: At5G06000.1 |
score: 320 |
e-value: 8e-88 |
Identity: 59.86% |
Span: 882bp (76.5%) |
Frame: 1 |
| Symbols: ATEIF3G2, EIF3G2 | EIF3G2 (eukaryotic translation initiation factor 3G2); RNA binding / translation initiat... |
| Match: At1G54080.1 |
score: 67 |
e-value: 2e-11 |
Identity: 43.21% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At3G14100.1 |
score: 66.6 |
e-value: 3e-11 |
Identity: 43.21% |
Span: 243bp (21.1%) |
Frame: 1 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At1G54080.2 |
score: 64.7 |
e-value: 1e-10 |
Identity: 42.35% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At1G16610.2 |
score: 64.3 |
e-value: 1e-10 |
Identity: 26.23% |
Span: 549bp (47.6%) |
Frame: 1 |
| Symbols: SR45 | SR45 (arginine/serine-rich 45); RNA binding | chr1:5675918-5678679 REVERSE |
| Match: At1G16610.1 |
score: 64.3 |
e-value: 1e-10 |
Identity: 26.23% |
Span: 549bp (47.6%) |
Frame: 1 |
| Symbols: SR45 | SR45 (arginine/serine-rich 45); RNA binding | chr1:5675918-5678679 REVERSE |
| Match: At4G34110.1 |
score: 60.8 |
e-value: 1e-09 |
Identity: 42.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G17370.1 |
score: 58.5 |
e-value: 7e-09 |
Identity: 39.51% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At1G55310.2 |
score: 56.6 |
e-value: 3e-08 |
Identity: 42.25% |
Span: 213bp (18.5%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At1G55310.1 |
score: 56.6 |
e-value: 3e-08 |
Identity: 42.25% |
Span: 213bp (18.5%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At1G13690.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 32.18% |
Span: 261bp (22.6%) |
Frame: 1 |
| Symbols: ATE1 | ATE1 (ATPase E1); nucleic acid binding | chr1:4693377-4694176 FORWARD |
| Match: At4G24770.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 36.67% |
Span: 270bp (23.4%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G53460.1 |
score: 55.8 |
e-value: 5e-08 |
Identity: 41.33% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.2 |
score: 55.8 |
e-value: 5e-08 |
Identity: 41.33% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At1G49760.1 |
score: 55.1 |
e-value: 8e-08 |
Identity: 40% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G23350.1 |
score: 55.1 |
e-value: 8e-08 |
Identity: 43.75% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At3G13570.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 42.19% |
Span: 192bp (16.7%) |
Frame: 1 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
| Match: At2G21440.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 32.89% |
Span: 228bp (19.8%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr2:9180792-9186145 REVERSE |
| Match: At1G60650.2 |
score: 53.5 |
e-value: 2e-07 |
Identity: 32.53% |
Span: 249bp (21.6%) |
Frame: 1 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At3G23830.2 |
score: 53.5 |
e-value: 2e-07 |
Identity: 37.18% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At5G64200.2 |
score: 53.5 |
e-value: 2e-07 |
Identity: 35.53% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At1G60650.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 32.53% |
Span: 249bp (21.6%) |
Frame: 1 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At3G23830.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 37.18% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At5G64200.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 35.53% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At2G37220.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 41.33% |
Span: 225bp (19.5%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At5G19030.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 31.65% |
Span: 237bp (20.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:6357505-6359083 REVERSE |
| Match: At3G46020.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (19.0%) |
Frame: 1 |
| RNA-binding protein, putative | chr3:16923496-16924235 REVERSE |
| Match: At5G04280.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 29.27% |
Span: 246bp (21.3%) |
Frame: 1 |
| glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD |
| Match: At5G54580.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 35.53% |
Span: 228bp (19.8%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22188558-22189882 FORWARD |
| Match: At4G13850.2 |
score: 52 |
e-value: 7e-07 |
Identity: 40.24% |
Span: 231bp (20.0%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At1G34140.1 |
score: 52 |
e-value: 7e-07 |
Identity: 45.21% |
Span: 219bp (19.0%) |
Frame: 1 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At4G13850.1 |
score: 52 |
e-value: 7e-07 |
Identity: 40.24% |
Span: 231bp (20.0%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At3G08000.1 |
score: 52 |
e-value: 7e-07 |
Identity: 38.16% |
Span: 228bp (19.8%) |
Frame: 1 |
| RNA-binding protein, putative | chr3:2555040-2555835 REVERSE |
| Match: At5G61030.1 |
score: 51.6 |
e-value: 9e-07 |
Identity: 39.13% |
Span: 207bp (18.0%) |
Frame: 1 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G53460.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 37.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At5G51300.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 26.01% |
Span: 462bp (40.1%) |
Frame: 1 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
| Match: At3G53460.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 37.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At5G51300.3 |
score: 51.2 |
e-value: 1e-06 |
Identity: 26.01% |
Span: 462bp (40.1%) |
Frame: 1 |
| nucleic acid binding / nucleotide binding / zinc ion binding | chr5:20867107-20869521 REVERSE |
| Match: At5G50250.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 38.1% |
Span: 252bp (21.9%) |
Frame: 1 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At5G51300.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 26.01% |
Span: 462bp (40.1%) |
Frame: 1 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
| Match: At2G37510.1 |
score: 50.8 |
e-value: 1e-06 |
Identity: 36.84% |
Span: 228bp (19.8%) |
Frame: 1 |
| RNA-binding protein, putative | chr2:15750190-15751582 REVERSE |
| Match: At3G55460.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 40.58% |
Span: 207bp (18.0%) |
Frame: 1 |
| Symbols: SCL30 | SCL30 (SC35-like splicing factor 30); RNA binding | chr3:20572001-20574479 FORWARD |
| Match: At1G03457.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 32.39% |
Span: 213bp (18.5%) |
Frame: 1 |
| RNA-binding protein, putative | chr1:861109-864019 REVERSE |
| Match: At1G07350.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 37.35% |
Span: 249bp (21.6%) |
Frame: 1 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2257730-2260099 REVERSE |
| Match: At2G46610.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 41.56% |
Span: 225bp (19.5%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At1G03457.2 |
score: 50.1 |
e-value: 3e-06 |
Identity: 32.39% |
Span: 213bp (18.5%) |
Frame: 1 |
| RNA-binding protein, putative | chr1:861109-864019 REVERSE |
| Match: At1G51510.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 26.67% |
Span: 225bp (19.5%) |
Frame: 1 |
| RNA-binding protein, putative | chr1:19106740-19108421 REVERSE |
| Match: At3G26420.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 32% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At1G74230.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 34.15% |
Span: 246bp (21.3%) |
Frame: 1 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At1G71770.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 39.73% |
Span: 219bp (19.0%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G49600.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 35.56% |
Span: 255bp (22.1%) |
Frame: 1 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At5G47320.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 40% |
Span: 180bp (15.6%) |
Frame: 1 |
| Symbols: RPS19 | RPS19 (40S ribosomal protein S19); RNA binding | chr5:19221028-19222178 FORWARD |
| Match: At1G49600.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 34.18% |
Span: 237bp (20.6%) |
Frame: 1 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At3G16380.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 43.66% |
Span: 213bp (18.5%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G22760.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 33.73% |
Span: 216bp (18.7%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At4G24770.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 37.18% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G19130.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 37.5% |
Span: 237bp (20.6%) |
Frame: 1 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At5G44200.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 34.67% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: ATCBP20, CBP20 | CBP20 (CAP-BINDING PROTEIN 20); RNA binding | chr5:17819289-17821102 REVERSE |
| Match: At1G07350.2 |
score: 48.9 |
e-value: 6e-06 |
Identity: 37.18% |
Span: 234bp (20.3%) |
Frame: 1 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2258814-2259584 REVERSE |
| Match: At1G49760.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 38.89% |
Span: 216bp (18.7%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G06210.1 |
score: 48.5 |
e-value: 7e-06 |
Identity: 30.12% |
Span: 249bp (21.6%) |
Frame: 1 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At2G16940.1 |
score: 48.5 |
e-value: 7e-06 |
Identity: 48.33% |
Span: 180bp (15.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr2:7349951-7354134 REVERSE |
| Match: At1G22760.1 |
score: 48.5 |
e-value: 7e-06 |
Identity: 39.13% |
Span: 207bp (18.0%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At3G10400.1 |
score: 48.5 |
e-value: 7e-06 |
Identity: 36.71% |
Span: 237bp (20.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:3232641-3233426 FORWARD |
| Match: At1G49760.1 |
score: 48.1 |
e-value: 1e-05 |
Identity: 34.21% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G39260.2 |
score: 47.8 |
e-value: 1e-05 |
Identity: 34.62% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At5G19030.2 |
score: 47.8 |
e-value: 1e-05 |
Identity: 34.38% |
Span: 192bp (16.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:6357572-6359026 REVERSE |
| Match: At2G37220.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 36.25% |
Span: 240bp (20.8%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At4G39260.3 |
score: 47.8 |
e-value: 1e-05 |
Identity: 34.62% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G39260.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 34.62% |
Span: 234bp (20.3%) |
Frame: 1 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G47500.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 32.93% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At5G09880.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 36.92% |
Span: 195bp (16.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:3081647-3085180 REVERSE |
| Match: At1G22760.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 41.1% |
Span: 219bp (19.0%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At5G52040.2 |
score: 47 |
e-value: 2e-05 |
Identity: 43.06% |
Span: 210bp (18.2%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 47 |
e-value: 2e-05 |
Identity: 43.06% |
Span: 210bp (18.2%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At2G36660.1 |
score: 47 |
e-value: 2e-05 |
Identity: 41.18% |
Span: 204bp (17.7%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At2G35410.1 |
score: 47 |
e-value: 2e-05 |
Identity: 48.39% |
Span: 180bp (15.6%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G60000.1 |
score: 47 |
e-value: 2e-05 |
Identity: 34.62% |
Span: 234bp (20.3%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At1G47490.2 |
score: 46.6 |
e-value: 3e-05 |
Identity: 32.93% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17428554 FORWARD |
| Match: At5G18810.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 38.98% |
Span: 177bp (15.4%) |
Frame: 1 |
| Symbols: SCL28 | SCL28 (SC35-like splicing factor 28); RNA binding | chr5:6268927-6271160 REVERSE |
| Match: At2G18510.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 38.81% |
Span: 201bp (17.4%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At1G47490.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 32.93% |
Span: 243bp (21.1%) |
Frame: 1 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At2G36660.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 38.67% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At5G59860.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 34.72% |
Span: 216bp (18.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:24130688-24131675 FORWARD |
| Match: At1G71770.1 |
score: 46.2 |
e-value: 4e-05 |
Identity: 39.13% |
Span: 207bp (18.0%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G47500.1 |
score: 46.2 |
e-value: 4e-05 |
Identity: 32.14% |
Span: 240bp (20.8%) |
Frame: 1 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At1G47490.1 |
score: 46.2 |
e-value: 4e-05 |
Identity: 33.33% |
Span: 225bp (19.5%) |
Frame: 1 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G02840.2 |
score: 46.2 |
e-value: 4e-05 |
Identity: 36.84% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At1G02840.3 |
score: 46.2 |
e-value: 4e-05 |
Identity: 36.84% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At3G16380.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 36.84% |
Span: 222bp (19.3%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At5G50250.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 35.9% |
Span: 234bp (20.3%) |
Frame: 1 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At1G71770.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 31.33% |
Span: 216bp (18.7%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At2G35410.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 34.12% |
Span: 255bp (22.1%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G49760.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 36.23% |
Span: 207bp (18.0%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G71770.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 33.33% |
Span: 261bp (22.6%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At2G23350.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 38.24% |
Span: 204bp (17.7%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At4G34110.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 35.71% |
Span: 219bp (19.0%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G34140.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 36.11% |
Span: 216bp (18.7%) |
Frame: 1 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At2G36660.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 31.58% |
Span: 228bp (19.8%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
|
| 141 lower scoring hits censored -- only 100 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|92872901|gb|ABE81433.1| |
score: 409 |
e-value: 1e-112 |
Identity: 73.88% |
Span: 870bp (75.5%) |
Frame: 1 |
| RNA-binding |
| Match: gi|12407751|gb|AAG53636.1| |
score: 396 |
e-value: 9e-109 |
Identity: 70.03% |
Span: 858bp (74.4%) |
Frame: 1 |
| gi|12407751|gb|AAG53636.1| initiation factor 3g [Arabidopsis thaliana] gi|21593472|gb|AAM65439.1| putative eukaryotic... |
| Match: gi|15229743|ref|NP_187747.1| |
score: 393 |
e-value: 7e-108 |
Identity: 69.69% |
Span: 858bp (74.4%) |
Frame: 1 |
| eukaryotic translation initiation factor 3G / eIF3g [Arabidopsis thaliana] >gi12322907|gb|AAG51445.1|AC008153_18 puta... |
| Match: gi|50915436|ref|XP_468182.1| |
score: 392 |
e-value: 2e-107 |
Identity: 72.54% |
Span: 879bp (76.2%) |
Frame: 1 |
| gi|50915436|ref|XP_468182.1| putative initiation factor 3g [Oryza sativa (japonica cultivar-group)] >gi|51964462|ref|... |
| Match: gi|10177573|dbj|BAB10805.1| |
score: 336 |
e-value: 1e-90 |
Identity: 58.9% |
Span: 975bp (84.6%) |
Frame: 1 |
| gi|10177573|dbj|BAB10805.1| eukaryotic translation initiation factor 3 subunit-like protein [Arabidopsis thaliana] |
| Match: gi|30681225|ref|NP_196219.2| |
score: 320 |
e-value: 6e-86 |
Identity: 59.86% |
Span: 882bp (76.5%) |
Frame: 1 |
| gi|30681225|ref|NP_196219.2| eukaryotic translation initiation factor 3, putative [Arabidopsis thaliana] gi|18252945|... |
| Match: gi|50915434|ref|XP_468181.1| |
score: 298 |
e-value: 4e-79 |
Identity: 60% |
Span: 798bp (69.2%) |
Frame: 1 |
| gi|50915434|ref|XP_468181.1| putative initiation factor 3g [Oryza sativa (japonica cultivar-group)] >gi|47497761|dbj|... |
| Match: gi|62857807|ref|NP_001016749.1| |
score: 186 |
e-value: 2e-45 |
Identity: 40.79% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|62857807|ref|NP_001016749.1| eukaryotic translation initiation factor 3, subunit 4 (delta) [Xenopus tropicalis] |
| Match: gi|47220039|emb|CAG12187.1| |
score: 184 |
e-value: 5e-45 |
Identity: 39.5% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|47220039|emb|CAG12187.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|31980808|ref|NP_058572.2| |
score: 182 |
e-value: 3e-44 |
Identity: 40.58% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|31980808|ref|NP_058572.2| eukaryotic translation initiation factor 3, subunit 4 (delta); translation initiation fa... |
| Match: gi|74212280|dbj|BAE40297.1| |
score: 182 |
e-value: 3e-44 |
Identity: 40.58% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|74212280|dbj|BAE40297.1| unnamed protein product [Mus musculus] |
| Match: gi|73986818|ref|XP_854113.1| |
score: 181 |
e-value: 6e-44 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|73986818|ref|XP_854113.1| PREDICTED: similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)... |
| Match: gi|49670432|gb|AAH75190.1| |
score: 181 |
e-value: 6e-44 |
Identity: 39.13% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|49670432|gb|AAH75190.1| Eif3s4-prov protein [Xenopus laevis] |
| Match: gi|51950280|gb|AAH82427.1| |
score: 181 |
e-value: 4e-44 |
Identity: 39.13% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|51950280|gb|AAH82427.1| MGC83338 protein [Xenopus laevis] |
| Match: gi|4097873|gb|AAD00176.1| |
score: 181 |
e-value: 7e-44 |
Identity: 40.94% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|4097873|gb|AAD00176.1| eIF3-p44 [Mus musculus] |
| Match: gi|55778376|gb|AAH86383.1| |
score: 180 |
e-value: 1e-43 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| Eukaryotic |
| Match: gi|48146385|emb|CAG33415.1| |
score: 179 |
e-value: 2e-43 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|48146385|emb|CAG33415.1| EIF3S4 [Homo sapiens] |
| Match: gi|109123410|ref|XP_001104633.1| |
score: 179 |
e-value: 2e-43 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|30583983|gb|AAP36240.1| |
score: 179 |
e-value: 2e-43 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|30583983|gb|AAP36240.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa [synthetic... |
| Match: gi|12653883|gb|AAH00733.1| |
score: 179 |
e-value: 2e-43 |
Identity: 40.22% |
Span: 795bp (69.0%) |
Frame: 1 |
| Eukaryotic |
| Match: gi|73986832|ref|XP_868244.1| |
score: 178 |
e-value: 5e-43 |
Identity: 40% |
Span: 789bp (68.4%) |
Frame: 1 |
| gi|73986832|ref|XP_868244.1| PREDICTED: similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)... |
| Match: gi|49619137|gb|AAT68153.1| |
score: 178 |
e-value: 4e-43 |
Identity: 36.63% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|49619137|gb|AAT68153.1| eukaryotic translation initiation factor 3 subunit 4 [Danio rerio] |
| Match: gi|73586725|gb|AAI02985.1| |
score: 178 |
e-value: 4e-43 |
Identity: 39.86% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|73586725|gb|AAI02985.1| Unknown (protein for MGC:128341) [Bos taurus] |
| Match: gi|72040019|ref|XP_791582.1| |
score: 177 |
e-value: 8e-43 |
Identity: 39.29% |
Span: 789bp (68.4%) |
Frame: 1 |
| gi|72040019|ref|XP_791582.1| PREDICTED: similar to eukaryotic translation initiation factor 3, subunit 4 delta [Stron... |
| Match: gi|73986830|ref|XP_868239.1| |
score: 177 |
e-value: 6e-43 |
Identity: 39.65% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|73986830|ref|XP_868239.1| PREDICTED: similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)... |
| Match: gi|3264859|gb|AAC78728.1| |
score: 177 |
e-value: 6e-43 |
Identity: 39.86% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|3264859|gb|AAC78728.1| translation initiation factor eIF3 p44 subunit [Homo sapiens] |
| Match: gi|29124629|gb|AAH49046.1| |
score: 176 |
e-value: 2e-42 |
Identity: 36.26% |
Span: 792bp (68.7%) |
Frame: 1 |
| gi|29124629|gb|AAH49046.1| Similar to eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa [Danio rerio] |
| Match: gi|110761892|ref|XP_391934.3| |
score: 169 |
e-value: 2e-40 |
Identity: 38.93% |
Span: 768bp (66.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|91090298|ref|XP_971711.1| |
score: 169 |
e-value: 3e-40 |
Identity: 37.04% |
Span: 795bp (69.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|90299447|gb|EAS29078.1| |
score: 163 |
e-value: 1e-38 |
Identity: 37.87% |
Span: 789bp (68.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|62319313|dbj|BAD94565.1| |
score: 162 |
e-value: 3e-38 |
Identity: 87.64% |
Span: 267bp (23.2%) |
Frame: 1 |
| eukaryotic translation initiation factor 3 subunit like protein [Arabidopsis thaliana] |
| Match: gi|73986828|ref|XP_868234.1| |
score: 159 |
e-value: 2e-37 |
Identity: 39.27% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|73986828|ref|XP_868234.1| PREDICTED: similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)... |
| Match: gi|2951777|dbj|BAA25105.1| |
score: 158 |
e-value: 4e-37 |
Identity: 34.87% |
Span: 768bp (66.6%) |
Frame: 1 |
| gi|2951777|dbj|BAA25105.1| translation initiation factor 3 [Schizosaccharomyces pombe] |
| Match: gi|3006180|emb|CAA18400.1| |
score: 157 |
e-value: 7e-37 |
Identity: 34.87% |
Span: 768bp (66.6%) |
Frame: 1 |
| gi|3006180|emb|CAA18400.1| tif35 [Schizosaccharomyces pombe] >gi|19112519|ref|NP_595727.1| hypothetical protein SPBC1... |
| Match: gi|46121373|ref|XP_385241.1| |
score: 157 |
e-value: 1e-36 |
Identity: 34.34% |
Span: 870bp (75.5%) |
Frame: 1 |
| gi|46121373|ref|XP_385241.1| hypothetical protein FG05065.1 [Gibberella zeae PH-1] >gi|42551561|gb|EAA74404.1| hypoth... |
| Match: gi|55245230|gb|EAA04126.2| |
score: 156 |
e-value: 1e-36 |
Identity: 37.04% |
Span: 798bp (69.2%) |
Frame: 1 |
| gi|55245230|gb|EAA04126.2| ENSANGP00000021554 [Anopheles gambiae str. PEST] >gi|58378017|ref|XP_308202.2| ENSANGP0000... |
| Match: gi|94469188|gb|ABF18443.1| |
score: 156 |
e-value: 2e-36 |
Identity: 37.78% |
Span: 798bp (69.2%) |
Frame: 1 |
| eukaryotic |
| Match: gi|83774990|dbj|BAE65113.1| |
score: 156 |
e-value: 2e-36 |
Identity: 36.8% |
Span: 786bp (68.2%) |
Frame: 1 |
| unnamed |
| Match: gi|71019737|ref|XP_760099.1| |
score: 156 |
e-value: 1e-36 |
Identity: 38.43% |
Span: 768bp (66.6%) |
Frame: 1 |
| gi|71019737|ref|XP_760099.1| hypothetical protein UM03952.1 [Ustilago maydis 521] >gi|46099864|gb|EAK85097.1| hypothe... |
| Match: gi|111058845|gb|EAT79965.1| |
score: 154 |
e-value: 1e-35 |
Identity: 36.6% |
Span: 786bp (68.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|67539694|ref|XP_663621.1| |
score: 154 |
e-value: 6e-36 |
Identity: 36.46% |
Span: 801bp (69.5%) |
Frame: 1 |
| gi|67539694|ref|XP_663621.1| hypothetical protein AN6017.2 [Aspergillus nidulans FGSC A4] >gi|40738468|gb|EAA57658.1|... |
| Match: gi|71001278|ref|XP_755320.1| |
score: 153 |
e-value: 1e-35 |
Identity: 36.4% |
Span: 801bp (69.5%) |
Frame: 1 |
| eukaryotic |
| Match: gi|21430230|gb|AAM50793.1| |
score: 153 |
e-value: 1e-35 |
Identity: 37.31% |
Span: 768bp (66.6%) |
Frame: 1 |
| LD24347p |
| Match: gi|55648221|ref|XP_512361.1| |
score: 153 |
e-value: 2e-35 |
Identity: 38.67% |
Span: 735bp (63.7%) |
Frame: 1 |
| gi|55648221|ref|XP_512361.1| PREDICTED: DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes] |
| Match: gi|88180513|gb|EAQ87981.1| |
score: 152 |
e-value: 3e-35 |
Identity: 34.53% |
Span: 789bp (68.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|39971587|ref|XP_367184.1| |
score: 152 |
e-value: 4e-35 |
Identity: 34.2% |
Span: 858bp (74.4%) |
Frame: 1 |
| gi|39971587|ref|XP_367184.1| hypothetical protein MG07109.4 [Magnaporthe grisea 70-15] |
| Match: gi|24648403|ref|NP_650887.1| |
score: 150 |
e-value: 1e-34 |
Identity: 35.77% |
Span: 771bp (66.9%) |
Frame: 1 |
| gi|24648403|ref|NP_650887.1| CG10881-PA [Drosophila melanogaster] gi|7300614|gb|AAF55764.1| CG10881-PA [Drosophila me... |
| Match: gi|54643275|gb|EAL32019.1| |
score: 150 |
e-value: 1e-34 |
Identity: 36.92% |
Span: 768bp (66.6%) |
Frame: 1 |
| gi|54643275|gb|EAL32019.1| GA21226-PA [Drosophila pseudoobscura] |
| Match: gi|73986826|ref|XP_868230.1| |
score: 150 |
e-value: 1e-34 |
Identity: 45.32% |
Span: 561bp (48.7%) |
Frame: 1 |
| gi|73986826|ref|XP_868230.1| PREDICTED: similar to eukaryotic translation initiation factor 3, subunit 4 (delta) (pre... |
| Match: gi|54638633|gb|EAL28035.1| |
score: 142 |
e-value: 4e-32 |
Identity: 34.73% |
Span: 771bp (66.9%) |
Frame: 1 |
| gi|54638633|gb|EAL28035.1| GA10616-PA [Drosophila pseudoobscura] |
| Match: gi|95102874|gb|ABF51378.1| |
score: 140 |
e-value: 1e-31 |
Identity: 34.21% |
Span: 795bp (69.0%) |
Frame: 1 |
| eukaryotic |
| Match: gi|95115192|gb|ABF55962.1| |
score: 139 |
e-value: 3e-31 |
Identity: 33.83% |
Span: 795bp (69.0%) |
Frame: 1 |
| CG10881-like |
| Match: gi|49237623|gb|AAT58031.1| |
score: 139 |
e-value: 2e-31 |
Identity: 87.34% |
Span: 237bp (20.6%) |
Frame: 1 |
| gi|49237623|gb|AAT58031.1| eukaryotic translation initiation factor 3 subunit g [Triticum aestivum] |
| Match: gi|39979172|emb|CAE85545.1| |
score: 136 |
e-value: 2e-30 |
Identity: 32.68% |
Span: 870bp (75.5%) |
Frame: 1 |
| gi|39979172|emb|CAE85545.1| related to translation initiation factor eIF3 subunit [Neurospora crassa] |
| Match: gi|85109035|ref|XP_962716.1| |
score: 136 |
e-value: 2e-30 |
Identity: 32.8% |
Span: 870bp (75.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|68482037|ref|XP_715036.1| |
score: 134 |
e-value: 1e-29 |
Identity: 33.94% |
Span: 804bp (69.7%) |
Frame: 1 |
| gi|68482037|ref|XP_715036.1| hypothetical protein CaO19.7236 [Candida albicans SC5314] >gi|46436639|gb|EAK95998.1| hy... |
| Match: gi|57229905|gb|AAW46307.1| |
score: 133 |
e-value: 1e-29 |
Identity: 36.36% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|57229905|gb|AAW46307.1| eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa, putative [Cryptococcus... |
| Match: gi|56754778|gb|AAW25574.1| |
score: 131 |
e-value: 5e-29 |
Identity: 30% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|56754778|gb|AAW25574.1| SJCHGC06618 protein [Schistosoma japonicum] |
| Match: gi|44982879|gb|AAS52109.1| |
score: 130 |
e-value: 1e-28 |
Identity: 32.6% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|44982879|gb|AAS52109.1| ADR189Wp [Ashbya gossypii ATCC 10895] >gi|45188062|ref|NP_984285.1| ADR189Wp [Eremothecium... |
| Match: gi|6320637|ref|NP_010717.1| |
score: 126 |
e-value: 2e-27 |
Identity: 34.42% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|6320637|ref|NP_010717.1| Translation initiation factor 3 p33 subunit; Tif35p [Saccharomyces cerevisiae] gi|3024025... |
| Match: gi|71032399|ref|XP_765841.1| |
score: 124 |
e-value: 8e-27 |
Identity: 35.38% |
Span: 780bp (67.6%) |
Frame: 1 |
| eukaryotic |
| Match: gi|65305414|emb|CAI73739.1| |
score: 122 |
e-value: 2e-26 |
Identity: 35.77% |
Span: 780bp (67.6%) |
Frame: 1 |
| gi|65305414|emb|CAI73739.1| eukaryotic translation initiation factor (eiF3 delta homologue), putative [Theileria annu... |
| Match: gi|49526307|emb|CAG59931.1| |
score: 122 |
e-value: 2e-26 |
Identity: 33.45% |
Span: 795bp (69.0%) |
Frame: 1 |
| unnamed |
| Match: gi|12641792|emb|CAC27531.1| |
score: 120 |
e-value: 2e-25 |
Identity: 53.23% |
Span: 369bp (32.0%) |
Frame: 1 |
| gi|12641792|emb|CAC27531.1| eukaryotic translation initiation factor 3 p42 [Platichthys flesus] |
| Match: gi|95007125|emb|CAJ20346.1| |
score: 115 |
e-value: 5e-24 |
Identity: 32.33% |
Span: 774bp (67.1%) |
Frame: 1 |
| eukaryotic |
| Match: gi|77696469|gb|ABB00913.1| |
score: 115 |
e-value: 5e-24 |
Identity: 32.33% |
Span: 774bp (67.1%) |
Frame: 1 |
| gi|77696469|gb|ABB00913.1| eukaryotic translation initiation factor 3 p42 subunit [Toxoplasma gondii] |
| Match: gi|50303253|ref|XP_451568.1| |
score: 115 |
e-value: 4e-24 |
Identity: 31.48% |
Span: 798bp (69.2%) |
Frame: 1 |
| gi|50303253|ref|XP_451568.1| unnamed protein product [Kluyveromyces lactis] >gi|49640700|emb|CAH01961.1| unnamed prot... |
| Match: gi|83754750|pdb|2CQ0|A |
score: 115 |
e-value: 5e-24 |
Identity: 62.35% |
Span: 255bp (22.1%) |
Frame: 1 |
| Chain |
| Match: gi|50552081|ref|XP_503515.1| |
score: 112 |
e-value: 3e-23 |
Identity: 31.6% |
Span: 783bp (67.9%) |
Frame: 1 |
| gi|50552081|ref|XP_503515.1| hypothetical protein [Yarrowia lipolytica] >gi|49649384|emb|CAG79094.1| unnamed protein ... |
| Match: gi|49654327|emb|CAG86799.1| |
score: 112 |
e-value: 3e-23 |
Identity: 31.85% |
Span: 795bp (69.0%) |
Frame: 1 |
| gi|49654327|emb|CAG86799.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50420255|ref|XP_458660.1| unna... |
| Match: gi|73986824|ref|XP_868227.1| |
score: 111 |
e-value: 5e-23 |
Identity: 62.2% |
Span: 246bp (21.3%) |
Frame: 1 |
| gi|73986824|ref|XP_868227.1| PREDICTED: similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)... |
| Match: gi|76621798|ref|XP_873391.1| |
score: 109 |
e-value: 3e-22 |
Identity: 62.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|76621798|ref|XP_873391.1| PREDICTED: similar to eukaryotic translation initiation factor 3, subunit 4 (delta) (pre... |
| Match: gi|39587179|emb|CAE57647.1| |
score: 105 |
e-value: 3e-21 |
Identity: 30.71% |
Span: 744bp (64.5%) |
Frame: 1 |
| gi|39587179|emb|CAE57647.1| Hypothetical protein CBG00635 [Caenorhabditis briggsae] >gi|39578878|emb|CAE57074.1| Hypo... |
| Match: gi|17533393|ref|NP_495778.1| |
score: 103 |
e-value: 1e-20 |
Identity: 30.51% |
Span: 684bp (59.3%) |
Frame: 1 |
| gi|17533393|ref|NP_495778.1| eukaryotic Initiation Factor (eif-3.G) [Caenorhabditis elegans] gi|3024026|sp|Q19706|IF3... |
| Match: gi|1749496|dbj|BAA13806.1| |
score: 101 |
e-value: 7e-20 |
Identity: 44.44% |
Span: 351bp (30.4%) |
Frame: 1 |
| gi|1749496|dbj|BAA13806.1| similar to Saccharomyces cerevisiae no definition line found, GENEBANK Accession Number U3... |
| Match: gi|29841248|gb|AAP06280.1| |
score: 92.8 |
e-value: 3e-17 |
Identity: 28.12% |
Span: 657bp (57.0%) |
Frame: 1 |
| gi|29841248|gb|AAP06280.1| similar to GenBank Accession Number AF108214 eukaryotic translation initiation factor 3 p4... |
| Match: gi|82593902|ref|XP_725199.1| |
score: 90.5 |
e-value: 1e-16 |
Identity: 49.4% |
Span: 249bp (21.6%) |
Frame: 1 |
| eukaryotic |
| Match: gi|68069097|ref|XP_676459.1| |
score: 90.5 |
e-value: 1e-16 |
Identity: 49.4% |
Span: 249bp (21.6%) |
Frame: 1 |
| gi|68069097|ref|XP_676459.1| eukaryotic translation initiation factor, putative [Plasmodium berghei] >gi|56496167|emb... |
| Match: gi|23612859|ref|NP_704398.1| |
score: 89 |
e-value: 4e-16 |
Identity: 38.84% |
Span: 363bp (31.5%) |
Frame: 1 |
| gi|23612859|ref|NP_704398.1| eukaryotic translation initiation factor, putative [Plasmodium falciparum 3D7] gi|234991... |
| Match: gi|66815353|ref|XP_641693.1| |
score: 87.8 |
e-value: 8e-16 |
Identity: 28.86% |
Span: 738bp (64.0%) |
Frame: 1 |
| gi|66815353|ref|XP_641693.1| hypothetical protein DDB0205840 [Dictyostelium discoideum] >gi|60469725|gb|EAL67713.1| h... |
| Match: gi|92897151|gb|ABE93555.1| |
score: 87 |
e-value: 1e-15 |
Identity: 55.26% |
Span: 228bp (19.8%) |
Frame: 1 |
| RNA-binding |
| Match: gi|67584893|ref|XP_665075.1| |
score: 85.9 |
e-value: 3e-15 |
Identity: 40.18% |
Span: 333bp (28.9%) |
Frame: 1 |
| gi|67584893|ref|XP_665075.1| eukaryotic translation initiation factor [Cryptosporidium hominis] >gi|54655472|gb|EAL34... |
| Match: gi|29339196|gb|AAO76994.1| |
score: 70.9 |
e-value: 1e-10 |
Identity: 42.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|29339196|gb|AAO76994.1| putative RNA-binding protein rbpA [Bacteroides thetaiotaomicron VPI-5482] >gi|29347297|ref... |
| Match: gi|15221031|ref|NP_175810.1| |
score: 67 |
e-value: 2e-09 |
Identity: 43.21% |
Span: 243bp (21.1%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U5... |
| Match: gi|15231783|ref|NP_188026.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 43.21% |
Span: 243bp (21.1%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi9294635|dbj|BAB02974.1| RNA binding protein nucleo... |
| Match: gi|21593280|gb|AAM65229.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 43.21% |
Span: 243bp (21.1%) |
Frame: 1 |
| oligouridylate binding protein, putative [Arabidopsis thaliana] |
| Match: gi|7673355|gb|AAF66823.1| |
score: 65.1 |
e-value: 6e-09 |
Identity: 48.75% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|111056352|gb|EAT77472.1| |
score: 65.1 |
e-value: 6e-09 |
Identity: 35.63% |
Span: 261bp (22.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|28173040|gb|AAO32675.1| |
score: 65.1 |
e-value: 6e-09 |
Identity: 41.25% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar] |
| Match: gi|50260599|gb|EAL23252.1| |
score: 64.7 |
e-value: 8e-09 |
Identity: 42.31% |
Span: 234bp (20.3%) |
Frame: 1 |
| gi|50260599|gb|EAL23252.1| hypothetical protein CNBA3680 [Cryptococcus neoformans var. neoformans B-3501A] |
| Match: gi|30695647|ref|NP_849806.1| |
score: 64.7 |
e-value: 8e-09 |
Identity: 42.35% |
Span: 243bp (21.1%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|20975278|dbj|BAB92956.1| |
score: 64.7 |
e-value: 8e-09 |
Identity: 42.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica] |
| Match: gi|57222864|gb|AAW40908.1| |
score: 64.7 |
e-value: 8e-09 |
Identity: 42.31% |
Span: 234bp (20.3%) |
Frame: 1 |
| gi|57222864|gb|AAW40908.1| transformer-2-beta isoform 3, putative [Cryptococcus neoformans var. neoformans JEC21] >gi... |
| Match: gi|49527824|emb|CAG61473.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 46.43% |
Span: 249bp (21.6%) |
Frame: 1 |
| unnamed |
| Match: gi|20975276|dbj|BAB92955.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 42.5% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica] |
| Match: gi|42571507|ref|NP_973844.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 26.23% |
Span: 549bp (47.6%) |
Frame: 1 |
| SR45; RNA binding / protein binding [Arabidopsis thaliana] >gi59958310|gb|AAX12865.1| At1g16610 [Arabidopsis thaliana] |
| Match: gi|56382017|gb|AAV85727.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 26.23% |
Span: 549bp (47.6%) |
Frame: 1 |
| gi|56382017|gb|AAV85727.1| At1g16610 [Arabidopsis thaliana] >gi|9989058|gb|AAG10821.1| arginine/serine-rich protein [... |
| Match: gi|15027957|gb|AAK76509.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 26.23% |
Span: 549bp (47.6%) |
Frame: 1 |
| putative arginine/serine-rich protein [Arabidopsis thaliana] |
| Match: gi|77551976|gb|ABA94773.1| |
score: 63.9 |
e-value: 1e-08 |
Identity: 43.75% |
Span: 240bp (20.8%) |
Frame: 1 |
| gi|77551976|gb|ABA94773.1| oligouridylate binding protein, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108864589|gb|ABG22554.1| |
score: 63.9 |
e-value: 1e-08 |
Identity: 43.75% |
Span: 240bp (20.8%) |
Frame: 1 |
| RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] |
|
| 273 lower scoring hits censored -- only 100 best hits are stored. |
