| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255546239|ref|XP_002514179.1| |
score: 251 |
e-value: 1e-64 |
Identity: 93.92% |
Span: 444bp (41.0%) |
Frame: 3 |
| Charged multivesicular body protein 4b, putative [Ricinus communis] >gi223546635|gb|EEF48133.1| Charged multivesicula... |
| Match: gi|225445015|ref|XP_002283066.1| |
score: 251 |
e-value: 1e-64 |
Identity: 95.27% |
Span: 444bp (41.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147840660|emb|CAN61998.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|224088055|ref|XP_002308308.1| |
score: 250 |
e-value: 2e-64 |
Identity: 94.59% |
Span: 444bp (41.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222854284|gb|EEE91831.1| predicted protein [Populus trichocarpa] |
| Match: gi|225429420|ref|XP_002275998.1| |
score: 250 |
e-value: 2e-64 |
Identity: 95.27% |
Span: 444bp (41.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147832595|emb|CAN68229.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|224122616|ref|XP_002330526.1| |
score: 243 |
e-value: 2e-62 |
Identity: 92.57% |
Span: 444bp (41.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222872460|gb|EEF09591.1| predicted protein [Populus trichocarpa] |
| Match: gi|116791024|gb|ABK25827.1| |
score: 242 |
e-value: 6e-62 |
Identity: 89.19% |
Span: 444bp (41.0%) |
Frame: 3 |
| unknown [Picea sitchensis] >gi224284921|gb|ACN40190.1| unknown [Picea sitchensis] >gi|224286294|gb|ACN40855.1| unknow... |
| Match: gi|116784869|gb|ABK23499.1| |
score: 242 |
e-value: 6e-62 |
Identity: 89.19% |
Span: 444bp (41.0%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|15233464|ref|NP_194645.1| |
score: 239 |
e-value: 5e-61 |
Identity: 90.54% |
Span: 444bp (41.0%) |
Frame: 3 |
| SNF7.1 [Arabidopsis thaliana] >gi145334175|ref|NP_001078468.1| SNF7.1 [Arabidopsis thaliana] >gi|75213588|sp|Q9SZE4.1... |
| Match: gi|255646469|gb|ACU23713.1| |
score: 238 |
e-value: 7e-61 |
Identity: 92.36% |
Span: 432bp (39.9%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|21594892|gb|AAM66053.1| |
score: 237 |
e-value: 2e-60 |
Identity: 91.72% |
Span: 435bp (40.2%) |
Frame: 3 |
| copia-like retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|15224854|ref|NP_179573.1| |
score: 235 |
e-value: 6e-60 |
Identity: 90.34% |
Span: 435bp (40.2%) |
Frame: 3 |
| SNF7.2 [Arabidopsis thaliana] >gi75100551|sp|O82197.1|VP321_ARATH RecName: Full=Vacuolar protein sorting-associated p... |
| Match: gi|217075068|gb|ACJ85894.1| |
score: 232 |
e-value: 5e-59 |
Identity: 87.33% |
Span: 444bp (41.0%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|294464621|gb|ADE77819.1| |
score: 230 |
e-value: 2e-58 |
Identity: 84.46% |
Span: 444bp (41.0%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|212274673|ref|NP_001130288.1| |
score: 229 |
e-value: 6e-58 |
Identity: 85.33% |
Span: 444bp (41.0%) |
Frame: 3 |
| hypothetical protein LOC100191382 [Zea mays] >gi194688756|gb|ACF78462.1| unknown [Zea mays] |
| Match: gi|242053619|ref|XP_002455955.1| |
score: 228 |
e-value: 9e-58 |
Identity: 84.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g027900 [Sorghum bicolor] >gi241927930|gb|EES01075.1| hypothetical protein SORBIDRA... |
| Match: gi|195634923|gb|ACG36930.1| |
score: 228 |
e-value: 9e-58 |
Identity: 84.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| charged multivesicular body protein 4b [Zea mays] >gi223975345|gb|ACN31860.1| unknown [Zea mays] |
| Match: gi|194699138|gb|ACF83653.1| |
score: 228 |
e-value: 9e-58 |
Identity: 84.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|226531089|ref|NP_001147424.1| |
score: 228 |
e-value: 9e-58 |
Identity: 84.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| charged multivesicular body protein 4b [Zea mays] >gi194694158|gb|ACF81163.1| unknown [Zea mays] >gi|194706910|gb|ACF... |
| Match: gi|270253601|emb|CBI35999.1| |
score: 228 |
e-value: 1e-57 |
Identity: 86.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|195617452|gb|ACG30556.1| |
score: 228 |
e-value: 1e-57 |
Identity: 84.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| charged multivesicular body protein 4b [Zea mays] |
| Match: gi|225442381|ref|XP_002281551.1| |
score: 228 |
e-value: 1e-57 |
Identity: 86.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147795972|emb|CAN76335.1| hypothetical protein [Vitis vinifera] |
| Match: gi|222641183|gb|EEE69315.1| |
score: 227 |
e-value: 2e-57 |
Identity: 84% |
Span: 444bp (41.0%) |
Frame: 3 |
| hypothetical protein OsJ_28603 [Oryza sativa Japonica Group] |
| Match: gi|125562988|gb|EAZ08368.1| |
score: 227 |
e-value: 2e-57 |
Identity: 84% |
Span: 444bp (41.0%) |
Frame: 3 |
| hypothetical protein OsI_30625 [Oryza sativa Indica Group] |
| Match: gi|115478256|ref|NP_001062723.1| |
score: 227 |
e-value: 2e-57 |
Identity: 84% |
Span: 444bp (41.0%) |
Frame: 3 |
| Os09g0267600 [Oryza sativa (japonica cultivar-group)] >gi113630956|dbj|BAF24637.1| Os09g0267600 [Oryza sativa Japonic... |
| Match: gi|226499008|ref|NP_001152491.1| |
score: 211 |
e-value: 9e-53 |
Identity: 78.29% |
Span: 450bp (41.6%) |
Frame: 3 |
| charged multivesicular body protein 4b [Zea mays] >gi195656771|gb|ACG47853.1| charged multivesicular body protein 4b ... |
|
| 137 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At4G29160.3 |
score: 239 |
e-value: 3e-63 |
Identity: 90.54% |
Span: 444bp (41.0%) |
Frame: 3 |
| SNF7 family protein | chr4:14381025-14382348 FORWARD |
| Match: At4G29160.1 |
score: 239 |
e-value: 3e-63 |
Identity: 90.54% |
Span: 444bp (41.0%) |
Frame: 3 |
| SNF7 family protein | chr4:14381025-14382348 FORWARD |
| Match: At2G19830.1 |
score: 235 |
e-value: 3e-62 |
Identity: 90.34% |
Span: 435bp (40.2%) |
Frame: 3 |
| SNF7 family protein | chr2:8565183-8566471 REVERSE |
| Match: At4G29160.2 |
score: 196 |
e-value: 2e-50 |
Identity: 93.39% |
Span: 363bp (33.5%) |
Frame: 3 |
| SNF7 family protein | chr4:14381356-14382348 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9SZE4 |
score: 239 |
e-value: 3e-62 |
Identity: 90.54% |
Span: 444bp (41.0%) |
Frame: 3 |
| Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1 |
| Match: O82197 |
score: 235 |
e-value: 4e-61 |
Identity: 90.34% |
Span: 435bp (40.2%) |
Frame: 3 |
| Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1 |
| Match: Q86H98 |
score: 90.9 |
e-value: 1e-17 |
Identity: 35.86% |
Span: 435bp (40.2%) |
Frame: 3 |
| Charged multivesicular body protein 4 OS=Dictyostelium discoideum GN=chmp4 PE=3 SV=1 |
| Match: Q6CJL0 |
score: 85.1 |
e-value: 8e-16 |
Identity: 35.81% |
Span: 441bp (40.8%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis GN=SNF7 PE=3 SV=1 |
| Match: Q9P7F7 |
score: 84.7 |
e-value: 1e-15 |
Identity: 31.97% |
Span: 441bp (40.8%) |
Frame: 3 |
| Vacuolar-sorting protein snf7 OS=Schizosaccharomyces pombe GN=snf7 PE=2 SV=1 |
| Match: Q7ZVC4 |
score: 84 |
e-value: 2e-15 |
Identity: 38.41% |
Span: 444bp (41.0%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Danio rerio GN=chmp4b PE=2 SV=1 |
| Match: Q753W3 |
score: 82 |
e-value: 7e-15 |
Identity: 34.44% |
Span: 441bp (40.8%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Ashbya gossypii GN=SNF7 PE=3 SV=1 |
| Match: Q6IQ73 |
score: 82 |
e-value: 7e-15 |
Identity: 39.07% |
Span: 444bp (41.0%) |
Frame: 3 |
| Charged multivesicular body protein 4c OS=Danio rerio GN=chmp4c PE=2 SV=1 |
| Match: Q6FW96 |
score: 81.6 |
e-value: 9e-15 |
Identity: 35.33% |
Span: 441bp (40.8%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Candida glabrata GN=SNF7 PE=3 SV=1 |
| Match: Q9BY43 |
score: 80.1 |
e-value: 2e-14 |
Identity: 36.05% |
Span: 435bp (40.2%) |
Frame: 3 |
| Charged multivesicular body protein 4a OS=Homo sapiens GN=CHMP4A PE=1 SV=3 |
| Match: Q6GL11 |
score: 79.7 |
e-value: 3e-14 |
Identity: 38.03% |
Span: 426bp (39.4%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Xenopus tropicalis GN=chmp4b PE=2 SV=1 |
| Match: Q5XGW6 |
score: 79.7 |
e-value: 3e-14 |
Identity: 38.03% |
Span: 426bp (39.4%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Xenopus laevis GN=chmp4b PE=2 SV=1 |
| Match: Q5ABD0 |
score: 79.3 |
e-value: 4e-14 |
Identity: 35.16% |
Span: 384bp (35.5%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Candida albicans GN=SNF7 PE=3 SV=1 |
| Match: Q5ZHP5 |
score: 78.6 |
e-value: 7e-14 |
Identity: 40% |
Span: 390bp (36.0%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Gallus gallus GN=CHMP4B PE=2 SV=1 |
| Match: Q9D8B3 |
score: 78.2 |
e-value: 9e-14 |
Identity: 40% |
Span: 390bp (36.0%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Mus musculus GN=Chmp4b PE=2 SV=2 |
| Match: Q9H444 |
score: 78.2 |
e-value: 9e-14 |
Identity: 40% |
Span: 390bp (36.0%) |
Frame: 3 |
| Charged multivesicular body protein 4b OS=Homo sapiens GN=CHMP4B PE=1 SV=1 |
| Match: Q6BSH2 |
score: 77.8 |
e-value: 1e-13 |
Identity: 32.67% |
Span: 444bp (41.0%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Debaryomyces hansenii GN=SNF7 PE=3 SV=2 |
| Match: P39929 |
score: 76.6 |
e-value: 3e-13 |
Identity: 30.46% |
Span: 441bp (40.8%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Saccharomyces cerevisiae GN=SNF7 PE=1 SV=1 |
| Match: Q6GNN8 |
score: 75.5 |
e-value: 6e-13 |
Identity: 36.17% |
Span: 423bp (39.1%) |
Frame: 3 |
| Charged multivesicular body protein 4c OS=Xenopus laevis GN=chmp4c PE=2 SV=1 |
| Match: Q5KL29 |
score: 74.7 |
e-value: 1e-12 |
Identity: 33.8% |
Span: 426bp (39.4%) |
Frame: 3 |
| Vacuolar-sorting protein SNF7 OS=Cryptococcus neoformans GN=SNF7 PE=3 SV=1 |
| Match: A2VDY3 |
score: 74.7 |
e-value: 1e-12 |
Identity: 34.69% |
Span: 435bp (40.2%) |
Frame: 3 |
| Charged multivesicular body protein 4a OS=Bos taurus GN=CHMP4A PE=2 SV=1 |
| Match: Q6DD52 |
score: 71.6 |
e-value: 9e-12 |
Identity: 30.26% |
Span: 435bp (40.2%) |
Frame: 3 |
| Charged multivesicular body protein 5 OS=Xenopus laevis GN=chmp5 PE=2 SV=1 |
| Match: Q5FW29 |
score: 71.2 |
e-value: 1e-11 |
Identity: 28.29% |
Span: 435bp (40.2%) |
Frame: 3 |
| Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1 |
| Match: Q96CF2 |
score: 69.7 |
e-value: 3e-11 |
Identity: 35.38% |
Span: 390bp (36.0%) |
Frame: 3 |
| Charged multivesicular body protein 4c OS=Homo sapiens GN=CHMP4C PE=1 SV=1 |
| Match: Q9D7F7 |
score: 68.2 |
e-value: 1e-10 |
Identity: 35.11% |
Span: 393bp (36.3%) |
Frame: 3 |
| Charged multivesicular body protein 4c OS=Mus musculus GN=Chmp4c PE=2 SV=1 |
|
