All Stored BLAST annotations for SGN-U428574
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157357773|emb|CAO64769.1| score: 354 e-value: 6e-96 Identity: 71.04% Span: 774bp (72.4%) Frame: 2
unnamed
Match: gi|115480119|ref|NP_001063653.1| score: 329 e-value: 3e-88 Identity: 76.89% Span: 636bp (59.5%) Frame: 2
Os09g0513700 [Oryza sativa (japonica cultivar-group)] >gi50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Ory...
Match: gi|30689357|ref|NP_850395.1| score: 326 e-value: 2e-87 Identity: 63.54% Span: 795bp (74.4%) Frame: 2
U1 small nuclear ribonucleoprotein 70 kDa, putative [Arabidopsis thaliana] >gi18252907|gb|AAL62380.1| putative U1 sma...
Match: gi|168024474|ref|XP_001764761.1| score: 281 e-value: 8e-74 Identity: 69.71% Span: 624bp (58.4%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162684055|gb|EDQ70460.1| predicted protein [Physcomitrella...
Match: gi|125606311|gb|EAZ45347.1| score: 263 e-value: 2e-68 Identity: 73.26% Span: 528bp (49.4%) Frame: 2
hypothetical
Match: gi|125564354|gb|EAZ09734.1| score: 259 e-value: 3e-67 Identity: 72.97% Span: 522bp (48.8%) Frame: 2
hypothetical
Match: gi|2289001|gb|AAB64330.1| score: 256 e-value: 2e-66 Identity: 57.3% Span: 795bp (74.4%) Frame: 2
putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana]
Match: gi|149605642|ref|XP_001519834.1| score: 158 e-value: 6e-37 Identity: 43.31% Span: 762bp (71.3%) Frame: 2
PREDICTED: similar to U1-snRNP binding protein homolog [Ornithorhynchus anatinus]
Match: gi|50756329|ref|XP_415114.1| score: 156 e-value: 3e-36 Identity: 42.62% Span: 729bp (68.2%) Frame: 2
gi|50756329|ref|XP_415114.1| PREDICTED: similar to U11/U12 snRNP 35K isoform a; hm-1; U1-snRNP binding protein homolo...
Match: gi|126324312|ref|XP_001375255.1| score: 155 e-value: 5e-36 Identity: 43.32% Span: 741bp (69.3%) Frame: 2
PREDICTED: similar to U1-snRNP binding protein homolog [Monodelphis domestica]
Match: gi|114647660|ref|XP_509463.2| score: 155 e-value: 5e-36 Identity: 42.64% Span: 777bp (72.7%) Frame: 2
PREDICTED: similar to U11/U12 snRNP 35K isoform b isoform 4 [Pan troglodytes]
Match: gi|156387741|ref|XP_001634361.1| score: 155 e-value: 4e-36 Identity: 42.34% Span: 744bp (69.6%) Frame: 2
predicted
Match: gi|119618819|gb|EAW98413.1| score: 154 e-value: 1e-35 Identity: 43.55% Span: 729bp (68.2%) Frame: 2
U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Match: gi|114647662|ref|XP_001169900.1| score: 154 e-value: 9e-36 Identity: 43.55% Span: 729bp (68.2%) Frame: 2
PREDICTED: similar to U11/U12 snRNP 35K isoform b isoform 1 [Pan troglodytes] >gi114647664|ref|XP_001169924.1| PREDIC...
Match: gi|115495605|ref|NP_001069024.1| score: 154 e-value: 1e-35 Identity: 43.5% Span: 729bp (68.2%) Frame: 2
hypothetical
Match: gi|31077198|ref|NP_851030.1| score: 154 e-value: 1e-35 Identity: 43.55% Span: 729bp (68.2%) Frame: 2
U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b [Homo sapiens] >gi52790429|gb|AAH09622.1| Small nucl...
Match: gi|13027642|ref|NP_073208.1| score: 154 e-value: 1e-35 Identity: 43.55% Span: 729bp (68.2%) Frame: 2
U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a [Homo sapiens] >gi74754517|sp|Q16560.1|U1SBP_HUMAN R...
Match: gi|47227145|emb|CAG00507.1| score: 152 e-value: 3e-35 Identity: 51.52% Span: 495bp (46.3%) Frame: 2
gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|26451879|dbj|BAC43032.1| score: 152 e-value: 4e-35 Identity: 57.76% Span: 453bp (42.4%) Frame: 2
gi|26451879|dbj|BAC43032.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana]
Match: gi|71834616|ref|NP_001025412.1| score: 151 e-value: 7e-35 Identity: 44.66% Span: 618bp (57.8%) Frame: 2
hypothetical
Match: gi|109099573|ref|XP_001089715.1| score: 151 e-value: 7e-35 Identity: 42.74% Span: 729bp (68.2%) Frame: 2
PREDICTED: similar to U11/U12 snRNP 35K isoform a [Macaca mulatta]
Match: gi|73995146|ref|XP_534648.2| score: 151 e-value: 1e-34 Identity: 53.33% Span: 495bp (46.3%) Frame: 2
PREDICTED: similar to U11/U12 snRNP 35K isoform a [Canis familiaris]
Match: gi|21624627|ref|NP_083808.1| score: 150 e-value: 2e-34 Identity: 44.26% Span: 729bp (68.2%) Frame: 2
gi|21624627|ref|NP_083808.1| RIKEN cDNA 6330548G22 [Mus musculus] gi|12857850|dbj|BAB31127.1| unnamed protein product...
Match: gi|26333021|dbj|BAC30228.1| score: 150 e-value: 2e-34 Identity: 53.33% Span: 495bp (46.3%) Frame: 2
gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Match: gi|62078981|ref|NP_001014149.1| score: 150 e-value: 2e-34 Identity: 53.33% Span: 495bp (46.3%) Frame: 2
gi|62078981|ref|NP_001014149.1| U1-snRNP binding protein homolog [Rattus norvegicus] >gi|55562850|gb|AAH86435.1| U1-s...
Match: gi|149720723|ref|XP_001498122.1| score: 150 e-value: 2e-34 Identity: 53.33% Span: 495bp (46.3%) Frame: 2
PREDICTED: similar to U11/U12 snRNP 35K [Equus caballus]
Match: gi|147903467|ref|NP_001090410.1| score: 149 e-value: 4e-34 Identity: 50.91% Span: 495bp (46.3%) Frame: 2
U11/U12
Match: gi|149063260|gb|EDM13583.1| score: 149 e-value: 3e-34 Identity: 53.33% Span: 495bp (46.3%) Frame: 2
similar
Match: gi|115925315|ref|XP_001185258.1| score: 149 e-value: 5e-34 Identity: 52.73% Span: 495bp (46.3%) Frame: 2
PREDICTED:
Match: gi|115613205|ref|XP_001182912.1| score: 149 e-value: 5e-34 Identity: 52.73% Span: 495bp (46.3%) Frame: 2
PREDICTED:
Match: gi|115629226|ref|XP_790452.2| score: 149 e-value: 5e-34 Identity: 52.73% Span: 495bp (46.3%) Frame: 2
PREDICTED:
Match: gi|119903042|ref|XP_869739.2| score: 144 e-value: 1e-32 Identity: 52.12% Span: 495bp (46.3%) Frame: 2
PREDICTED:
Match: gi|91086635|ref|XP_966565.1| score: 134 e-value: 1e-29 Identity: 50% Span: 498bp (46.6%) Frame: 2
PREDICTED:
Match: gi|170038581|ref|XP_001847127.1| score: 129 e-value: 5e-28 Identity: 48.47% Span: 489bp (45.7%) Frame: 2
U11/U12
Match: gi|157114772|ref|XP_001652414.1| score: 129 e-value: 5e-28 Identity: 37.78% Span: 672bp (62.9%) Frame: 2
splicing
Match: gi|193631809|ref|XP_001951817.1| score: 126 e-value: 3e-27 Identity: 48% Span: 525bp (49.1%) Frame: 2
PREDICTED:
Match: gi|118792383|ref|XP_320292.3| score: 123 e-value: 2e-26 Identity: 44.97% Span: 507bp (47.4%) Frame: 2
ENSANGP00000016629
Match: gi|66510315|ref|XP_623573.1| score: 120 e-value: 2e-25 Identity: 46.99% Span: 498bp (46.6%) Frame: 2
PREDICTED:
Match: gi|115480914|ref|NP_001064050.1| score: 107 e-value: 2e-21 Identity: 35.91% Span: 654bp (61.2%) Frame: 2
Os10g0115600 [Oryza sativa (japonica cultivar-group)] >gi78707654|gb|ABB46629.1| transposon protein, putative, CACTA,...
Match: gi|87130529|gb|ABD23908.1| score: 105 e-value: 8e-21 Identity: 32.03% Span: 654bp (61.2%) Frame: 2
U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica Group]
Match: gi|84468434|dbj|BAE71300.1| score: 103 e-value: 2e-20 Identity: 37.16% Span: 654bp (61.2%) Frame: 2
putative U1 snRNP 70K protein [Trifolium pratense]
Match: gi|73948009|ref|XP_541503.2| score: 103 e-value: 3e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
gi|73948009|ref|XP_541503.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Canis familiaris]
Match: gi|119572837|gb|EAW52452.1| score: 102 e-value: 7e-20 Identity: 37.62% Span: 627bp (58.7%) Frame: 2
small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen), isoform CRA_g [Homo sapiens]
Match: gi|114678225|ref|XP_001156213.1| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
PREDICTED: hypothetical protein [Pan troglodytes]
Match: gi|602021|emb|CAA29961.1| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Match: gi|149055933|gb|EDM07364.1| score: 102 e-value: 7e-20 Identity: 37.22% Span: 660bp (61.7%) Frame: 2
U1 small nuclear ribonucleoprotein polypeptide A (predicted), isoform CRA_c [Rattus norvegicus] >gi187469313|gb|AAI67...
Match: gi|194215756|ref|XP_001917325.1| score: 102 e-value: 5e-20 Identity: 37.22% Span: 660bp (61.7%) Frame: 2
PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K) [Equus caballus]
Match: gi|67846113|ref|NP_033250.3| score: 102 e-value: 7e-20 Identity: 37.22% Span: 660bp (61.7%) Frame: 2
gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus] >gi|74221620|dbj|BAE21515.1| un...
Match: gi|36100|emb|CAA28352.1| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Match: gi|109125535|ref|XP_001112732.1| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Match: gi|158259701|dbj|BAF85809.1| score: 102 e-value: 7e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
unnamed
Match: gi|49343272|gb|AAT64945.1| score: 102 e-value: 5e-20 Identity: 34.8% Span: 654bp (61.2%) Frame: 2
U1 snRNP [Zea mays] >gi49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Match: gi|115496910|ref|NP_001069514.1| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus] >gi117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuc...
Match: gi|29568103|ref|NP_003080.2| score: 102 e-value: 4e-20 Identity: 36.2% Span: 660bp (61.7%) Frame: 2
gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa; small nuclear ribonucleoprotein 70kD polypept...
Match: gi|68036648|gb|AAY84878.1| score: 101 e-value: 9e-20 Identity: 34.89% Span: 657bp (61.5%) Frame: 2
U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Match: gi|763157|emb|CAA33777.1| score: 100 e-value: 1e-19 Identity: 36.77% Span: 660bp (61.7%) Frame: 2
gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus] >gi|13633918|sp|Q62376|RU17_MOUSE U1 small n...
Match: gi|15229825|ref|NP_190636.1| score: 100 e-value: 2e-19 Identity: 35.32% Span: 651bp (60.9%) Frame: 2
U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis...
Match: gi|337445|gb|AAA36573.1| score: 99.8 e-value: 3e-19 Identity: 35.87% Span: 660bp (61.7%) Frame: 2
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen
Match: gi|157348154|emb|CAO22864.1| score: 98.6 e-value: 7e-19 Identity: 39.43% Span: 513bp (48.0%) Frame: 2
unnamed
Match: gi|50417136|gb|AAH77089.1| score: 98.6 e-value: 7e-19 Identity: 37.91% Span: 633bp (59.2%) Frame: 2
gi|50417136|gb|AAH77089.1| Snrp70 protein [Danio rerio]
Match: gi|51468002|ref|NP_001003875.1| score: 96.7 e-value: 3e-18 Identity: 37.44% Span: 633bp (59.2%) Frame: 2
U1
Match: gi|19114691|ref|NP_593779.1| score: 95.9 e-value: 5e-18 Identity: 36.84% Span: 399bp (37.3%) Frame: 2
gi|19114691|ref|NP_593779.1| putative U1 small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493123|pir||...
Match: gi|66910786|gb|AAH97714.1| score: 95.5 e-value: 6e-18 Identity: 36.49% Span: 624bp (58.4%) Frame: 2
gi|66910786|gb|AAH97714.1| Unknown (protein for IMAGE:6871460) [Xenopus laevis]
Match: gi|56757815|gb|AAW27048.1| score: 94.7 e-value: 1e-17 Identity: 33.33% Span: 657bp (61.5%) Frame: 2
gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Match: gi|148225156|ref|NP_001081603.1| score: 94.4 e-value: 1e-17 Identity: 36.02% Span: 624bp (58.4%) Frame: 2
U1
Match: gi|134091|sp|P09406|RU17_XENLA score: 94.4 e-value: 1e-17 Identity: 36.02% Span: 624bp (58.4%) Frame: 2
gi|134091|sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K) gi|8586...
Match: gi|190588659|gb|EDV28681.1| score: 93.6 e-value: 2e-17 Identity: 43.64% Span: 330bp (30.9%) Frame: 2
hypothetical
Match: gi|145538127|ref|XP_001454769.1| score: 93.6 e-value: 2e-17 Identity: 43.14% Span: 306bp (28.6%) Frame: 2
hypothetical
Match: gi|56118714|ref|NP_001008126.1| score: 93.6 e-value: 2e-17 Identity: 35.58% Span: 624bp (58.4%) Frame: 2
snrp70
Match: gi|145542919|ref|XP_001457146.1| score: 93.6 e-value: 2e-17 Identity: 43.14% Span: 306bp (28.6%) Frame: 2
hypothetical
Match: gi|74140671|dbj|BAB29263.3| score: 93.6 e-value: 2e-17 Identity: 43.97% Span: 393bp (36.8%) Frame: 2
unnamed protein product [Mus musculus] >gi74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Match: gi|108742141|gb|AAI17603.1| score: 93.6 e-value: 2e-17 Identity: 43.22% Span: 354bp (33.1%) Frame: 2
Snrp70
Match: gi|50552784|ref|XP_503802.1| score: 93.2 e-value: 3e-17 Identity: 32.47% Span: 654bp (61.2%) Frame: 2
gi|50552784|ref|XP_503802.1| hypothetical protein [Yarrowia lipolytica] >gi|49649671|emb|CAG79393.1| unnamed protein ...
Match: gi|156371745|ref|XP_001628922.1| score: 92.4 e-value: 5e-17 Identity: 42.72% Span: 309bp (28.9%) Frame: 2
predicted
Match: gi|125530954|gb|EAY77519.1| score: 92 e-value: 7e-17 Identity: 31.85% Span: 654bp (61.2%) Frame: 2
hypothetical
Match: gi|193657247|ref|XP_001947021.1| score: 92 e-value: 7e-17 Identity: 40.59% Span: 303bp (28.3%) Frame: 2
PREDICTED:
Match: gi|14028993|gb|AAK52534.1|AC078891_3 score: 92 e-value: 7e-17 Identity: 31.85% Span: 654bp (61.2%) Frame: 2
Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica Group]
Match: gi|110760725|ref|XP_623789.2| score: 92 e-value: 7e-17 Identity: 32.61% Span: 657bp (61.5%) Frame: 2
PREDICTED:
Match: gi|146197791|dbj|BAF57614.1| score: 91.7 e-value: 9e-17 Identity: 31.14% Span: 657bp (61.5%) Frame: 2
snRNP70K
Match: gi|159479638|ref|XP_001697897.1| score: 91.7 e-value: 9e-17 Identity: 35% Span: 660bp (61.7%) Frame: 2
U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii] >gi158273995|gb|EDO99780.1| U1 small nuclear ribonucle...
Match: gi|156547263|ref|XP_001602052.1| score: 91.7 e-value: 9e-17 Identity: 30.45% Span: 642bp (60.1%) Frame: 2
PREDICTED: similar to ENSANGP00000028567 [Nasonia vitripennis]
Match: gi|169864290|ref|XP_001838756.1| score: 91.3 e-value: 1e-16 Identity: 46.53% Span: 303bp (28.3%) Frame: 2
hypothetical
Match: gi|158286893|ref|XP_565448.3| score: 91.3 e-value: 1e-16 Identity: 33.48% Span: 654bp (61.2%) Frame: 2
AGAP006755-PA
Match: gi|170099527|ref|XP_001880982.1| score: 90.9 e-value: 2e-16 Identity: 46.53% Span: 303bp (28.3%) Frame: 2
predicted
Match: gi|91078908|ref|XP_967303.1| score: 90.5 e-value: 2e-16 Identity: 40.2% Span: 306bp (28.6%) Frame: 2
PREDICTED:
Match: gi|193662169|ref|XP_001952270.1| score: 90.1 e-value: 3e-16 Identity: 32.73% Span: 660bp (61.7%) Frame: 2
PREDICTED:
Match: gi|149462268|ref|XP_001517310.1| score: 89 e-value: 6e-16 Identity: 42.16% Span: 306bp (28.6%) Frame: 2
PREDICTED:
Match: gi|145544312|ref|XP_001457841.1| score: 89 e-value: 6e-16 Identity: 43.56% Span: 303bp (28.3%) Frame: 2
hypothetical
Match: gi|58258329|ref|XP_566577.1| score: 88.2 e-value: 1e-15 Identity: 45.54% Span: 303bp (28.3%) Frame: 2
U1
Match: gi|134106223|ref|XP_778122.1| score: 88.2 e-value: 1e-15 Identity: 45.54% Span: 303bp (28.3%) Frame: 2
hypothetical
Match: gi|84994904|ref|XP_952174.1| score: 87.8 e-value: 1e-15 Identity: 38.84% Span: 336bp (31.4%) Frame: 2
U1
Match: gi|322618|pir||S28147 score: 87.4 e-value: 2e-15 Identity: 30.77% Span: 651bp (60.9%) Frame: 2
gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Match: gi|71030936|ref|XP_765110.1| score: 87.4 e-value: 2e-15 Identity: 38.84% Span: 336bp (31.4%) Frame: 2
U1
Match: gi|51703882|gb|AAH81025.1| score: 87 e-value: 2e-15 Identity: 35.07% Span: 624bp (58.4%) Frame: 2
gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404) [Xenopus laevis]
Match: gi|119478256|ref|XP_001259339.1| score: 87 e-value: 2e-15 Identity: 40.57% Span: 303bp (28.3%) Frame: 2
U1
Match: gi|193913679|gb|EDW12546.1| score: 86.3 e-value: 4e-15 Identity: 39.22% Span: 306bp (28.6%) Frame: 2
GI24161
Match: gi|194129900|gb|EDW51943.1| score: 85.9 e-value: 5e-15 Identity: 38.24% Span: 306bp (28.6%) Frame: 2
GM13669
Match: gi|194174194|gb|EDW87805.1| score: 85.9 e-value: 5e-15 Identity: 38.24% Span: 306bp (28.6%) Frame: 2
GE18384
Match: gi|194190465|gb|EDX04041.1| score: 85.9 e-value: 5e-15 Identity: 38.24% Span: 306bp (28.6%) Frame: 2
GD22521
Match: gi|190661972|gb|EDV59164.1| score: 85.9 e-value: 5e-15 Identity: 38.24% Span: 306bp (28.6%) Frame: 2
GG23559

36 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At2G43370.1 score: 326 e-value: 1e-89 Identity: 63.54% Span: 795bp (74.4%) Frame: 2
U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD
Match: At3G50670.1 score: 100 e-value: 2e-21 Identity: 35.32% Span: 651bp (60.9%) Frame: 2
Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18837457-18840473 REVERSE