SGN Marker SSR99
SGN-M772
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 40.909 High: 42.857
Repeat motif: AG Repeat number: 6
Repeat motif: AT Repeat number: 5
Repeat motif: Repeat number:
Forward primer: GCCTCGGATTCAATAGCATTA
Reverse primer: CACAAAGAAGCAAACAACTCCA
Predicted size: 176
| Derivations |
This marker was derived from EST read SGN-E103626
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
| Other PCR data |
| ||||||||||||||
| Overgo hybridization and physical mapping |
SSR99 was used as an overgo probe on plate 7 [well A1]
Plausible BAC Matches: P147M03
Overgo Sequences
|
A sequence
CGCTATGGACGTTACAAAGAGATC
|
|
B sequence
TTGCTCCTTTCCCAAGGATCTCTT
|
|
AB sequence
CGCTATGGACGTTACAAAGAGATCCTTGGG
|
|
Marker sequence
AGCCTCGGATTCAATAGCATTAGCTTATCTATTATCTTTTTAATTACATC
AAGAGAAACTACATTAGTTTTGTGTTTTTGTTCTAATAAAGTTTAGTGAT AATCATATATATATAGAGAGAGAGAGAAAGTAGTTGCTTGTTAAATATAT TTTGTTGGAGTTGTTTGCTTCTTTGTGTATGTATAAGGATTTGGTTGAAC ATGCTTAAAGTTGGGATGAATGAAATGCTTGATGTTAATGGAACAAATTT GGAGTTGGAGTATGTGGAAGTGGATTCATCTAAACGCTATGGACGTTACA AAGAGATCCTTGGGAAAGGAGCAACCAAGATAGTATACAGAGCATTTGAT GAGTTACTAGGAATGGAAGTAGCTTGGAACCAAGTGAAACTCAATGACAT GTTTAGGTCACCTGAAGAATTACAAAGGCTCTACTCAGAAGTCCATCTCC TCAAAGAACTTGATCATGAAGCCATCATGAAATTCCATGCATCTTGGATC AATGTTGAAAGCAGAACCTTCAACTTCATTACTGAAA |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of SSR99
|
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
