Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E709724

Search information 
Request: 709724Match: SGN-E709724
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C482890Clone name: FA52DG08
cartOrder Clone
Library Name: FAOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Fruit
Development Stage: Mixture of Immature green, mature green, breaker, turning, and red ripe stages

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E709724Length: 872 bp (1163 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E709724 [] (trimmed) GACAATCGGAGCGTATTCAAAGTGGCTTGATGCTTCATCAAATGGATTTTCACATTTGCCCACACTCATTGATATTCTTGTGAGAGGCATGAGCA
CGTGTGAAGATTCCGCAGCTGCAGCTGCTTTAGCTTTCAGACACATATGCAATGATTGCAAGAAGAAGCTTTGTGGGTCACTAGATGGTCTGTTT
CAAATTTACCAAACGGCAGTCATTGGGGAAGGTCCCTTCAAAGTTTCCGCGGAAGATTCGTTGCATCTGGTTGAAGCTTTAAGTATGGTTATTAC
AGAGCTTCCTTCGGAACATGCTAAGAAGGCACTTGAGGCAGTATGCCTGCCATCTGTTGCTCAGTTACAAGAGATGATCAATCAAGGTCCCCAAG
TTTTGGGGCAAAAAAATGCTCGGGAATTAACTGTTCATTTTGATCGACTTCAAATATATTTAGATATGTAAATCACCCAGAAGCGGTTGCAGATG
CAATTCAAAAACTTTGGCCAATATTCAAAGCCATTTTTGATGTTCGTGCTTGGGACATGCGGACGATGGAGTCTCTTTGCCGGGCTTGTAAAAAT
GCTGTACGAACTTCTAAGAGGCTCATGGGGGTTACAATTGGGGCGATGCTGGAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTT
TCTTTATCTCTCTAGTGAAGTCATTAAGATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATA
CAGCATGTCTTCTTACAAAGATTCAGGATTTCCCTTCCCGTCCGGATATAGCAGATGATTGTTTTTTGCTGGCATCAAGATGTATCCGATAATGT
CCTCAACTATTTTTTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E709724] SGN-U567126 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T499345 [Download][View] Facility Assigned ID: FA52DG08
Submitter: None Sequencing Facility: Kazusa1
Funding Organization: the Japanese Ministry of Agriculture, Forestry and Fisheries.
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0059 Quality Trim Threshold: 14.5