EST details — SGN-E695545
| Search information |
| Request: 695545 | Match: SGN-E695545 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C468711 | Clone name: LH_Ea06M23 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C468711 [LH_Ea06M23] | Trace: SGN-T495723 | EST: SGN-E691705 | Direction: 5' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E695545 | Length: 853 bp (1026 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E695545 [] (trimmed)
TTTTTTTTTTTTTAGGAGTCAAGATGCTAGTAAAACTAGACGTAATCAGTTATACAGAAGTTATTAATAATTCAAGTTTAAGGACACGATTTAGG
CCACTAATATGCTTGAACTGCTCCTGAGTCTGCCAGCTAGAAGTTGTAGCAACTGAGCAGCTATCATAAATTACATAGTAGCTAACAGAATCTTT
AAGTCATCACTTGGCAAGCATCATACGGACAAACTCCTCATAATTAACTTGTCCATCACCATCAATATCTGCCTCTCGGATCATCTCATCCACCT
CTTCATCAGTCAGCTTCTCTCCAAGGGTTGTCATTACATGACGAAGCTCAGCTGCAGAAATAAAGCCATTCTGGTCTTTATCAAAAACCTTGAAA
GCCTCTTTGAGTTCTTCCTCAGAATCAGGGTCCTTCATCTTCCGTGCCATCAGATTCAAGAACTCTGGAAAATCAATGGTTCCATTCTGATCAGC
ATCAACTTCACTGATCATATCCTGTAGTTCAGCTTCAGTGGGATTCTGACCAAGTGATCTCATCACTGTTCCCAACTCCTTGGTAGTAATACAGC
CATCGCCATCCTTGTCGAAAAGGCTAAAAGCTTCCTTGAACTCAGCGATCTGCTCCTCCGTCAGCTGCTCTGCCATTTTTTTCCTCTCTTTTTTT
TTCTTCAACAATTCCTTCGATTACTGTAAAAACCCTATGCGCCTCGTGCCGAATTCGGCACGAGGCTGAATAATGCTCAAAGTTCCACAACACTT
GTTCCGGCAATCATTACATTTGGCGATTCCGCTGTGGATGTAGGAAATAATGACTACATTCATACTCTTTTTAAGGCTAATTATCCACCTTAT
CCACTAATATGCTTGAACTGCTCCTGAGTCTGCCAGCTAGAAGTTGTAGCAACTGAGCAGCTATCATAAATTACATAGTAGCTAACAGAATCTTT
AAGTCATCACTTGGCAAGCATCATACGGACAAACTCCTCATAATTAACTTGTCCATCACCATCAATATCTGCCTCTCGGATCATCTCATCCACCT
CTTCATCAGTCAGCTTCTCTCCAAGGGTTGTCATTACATGACGAAGCTCAGCTGCAGAAATAAAGCCATTCTGGTCTTTATCAAAAACCTTGAAA
GCCTCTTTGAGTTCTTCCTCAGAATCAGGGTCCTTCATCTTCCGTGCCATCAGATTCAAGAACTCTGGAAAATCAATGGTTCCATTCTGATCAGC
ATCAACTTCACTGATCATATCCTGTAGTTCAGCTTCAGTGGGATTCTGACCAAGTGATCTCATCACTGTTCCCAACTCCTTGGTAGTAATACAGC
CATCGCCATCCTTGTCGAAAAGGCTAAAAGCTTCCTTGAACTCAGCGATCTGCTCCTCCGTCAGCTGCTCTGCCATTTTTTTCCTCTCTTTTTTT
TTCTTCAACAATTCCTTCGATTACTGTAAAAACCCTATGCGCCTCGTGCCGAATTCGGCACGAGGCTGAATAATGCTCAAAGTTCCACAACACTT
GTTCCGGCAATCATTACATTTGGCGATTCCGCTGTGGATGTAGGAAATAATGACTACATTCATACTCTTTTTAAGGCTAATTATCCACCTTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E695545] | SGN-U590157 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T492330 [Download][View] | Facility Assigned ID: LH_Ea06M23.r |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 20.5 |
Working
