EST details — SGN-E694473
Search information |
Request: 694473 | Match: SGN-E694473 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C467639 | Clone name: LH_Ea04A07 |
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Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C467639 [LH_Ea04A07] | Trace: SGN-T497242 | EST: SGN-E690633 | Direction: 5' | Facility: AGI |
Sequence |
Sequence Id: SGN-E694473 | Length: 430 bp (1123 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E694473 [] (trimmed)
TTTTTTTTTTTTTTTTTAACAAACTGAAATAACTGATTATATATAACTGTGAAAAGAACAAAATAAAAGGTGNATGCATGAAGAGTTGCTTTCAA
AACCTGCTTATTGGAGTTACAAATAAACATCCACAATTAAGTGTGACATAAATATAAGCATTCTAGTGGATAATAATTTCCTTATTTTGCCCTTT
AATTTGCTTTTATTCTTCAATGGGATCATCAAGCACCATAAAAATGACGTCTTTCAAGTTATTTTTCGAAAAAGTATAAGCATCTTCGTCTTTAT
AAACAAACTCTGCCACCCTCGTAAGGTTGAGCACTGGCATGAGCAAAACTCTTGGTACTGTTGTAGGCTTTAGGCATCCTCTATTCAAATCCTTC
CAATTATTCTCTATTATTTTCCTTATCTCCATGTAAGCTTCTTCTTTTGT
AACCTGCTTATTGGAGTTACAAATAAACATCCACAATTAAGTGTGACATAAATATAAGCATTCTAGTGGATAATAATTTCCTTATTTTGCCCTTT
AATTTGCTTTTATTCTTCAATGGGATCATCAAGCACCATAAAAATGACGTCTTTCAAGTTATTTTTCGAAAAAGTATAAGCATCTTCGTCTTTAT
AAACAAACTCTGCCACCCTCGTAAGGTTGAGCACTGGCATGAGCAAAACTCTTGGTACTGTTGTAGGCTTTAGGCATCCTCTATTCAAATCCTTC
CAATTATTCTCTATTATTTTCCTTATCTCCATGTAAGCTTCTTCTTTTGT
Unigenes |
Current Unigene builds | |||||
[SGN-E694473] | SGN-U593014 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T493023 [Download][View] | Facility Assigned ID: LH_Ea04A07.r |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.933 | Expected Error Rate: 0.0213 | Quality Trim Threshold: 14.5 |