EST details — SGN-E680389
| Search information |
| Request: 680389 | Match: SGN-E680389 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C431084 | Clone name: cccwc22w11c3 |
| ||
| Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E680389 | Length: 897 bp (1238 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E680389 [] (trimmed)
GGCCACACAAAAGGTCGTTATTCCCCTCTCAATTCCCTCTCTCGGCCCTCGTCTTTCCCTAAAACAAAAAAAATTTCCAGCACACTTCCACTACA
CAAACACACACCAATAAGAAACTTTCCCTCACCCTCTCGGCTCTATCTCTCCATTTTTTCAATTCACACAACACACCCACAAACAATTCAAACAC
AACATAGCAAGCAACAAAGGATTAAAGCTTGGGAGTTCCTTCAACCATTTGGCCGAGAAACTCCTACTTGGATTGAGGAAAAAGAGACAGAATGA
GCGGAGCGGGAAAGGTGGTGTGCGTGACAGGAGCATCAGGATACATAGCTTCTTGGTTGATCAAGATGTTGCTTCATCGTGGTTATACCGTCAAA
GCTTCAGTTCGTGACCTCAATGATCCAAAAAAGACAGAATTTTTGATGGCACTGGATGGAGCCAAGGAAAGACTTCACTTGTTTCATGCAAACTT
AGTGGAAGATGGATCCTTTGATGCAATAGTTGATGGATGTGAAGGTGTTTTTCATACTGCATCTCCAATCCTTCATCCAGCGAGTGTGACCAATC
CACATAGAGCAATTGGATCCTGCACTAAAGGGAACACTGAATGTGCTGCGATCTTGTGCTAGAGTTTCATCTATCAAAAGAGTGGTTTTAACATC
TTCTATGAGAGCAGTGACATGTAATCGGGAACTAAAGGATGGTGTTGTAGTTGATGAAAGTTGGTTTGCAGATCCAACATACTGTGAGGAGCGCA
AGTTGTGGTATCCACTATCAAAGATTTTGGCAGAGAATGCTGCTTGGGAATTCTCAAAGGAGCATGGTATTGATATGGTTGCAATCATACCAAGA
ATGGTCATGGGTCCCATCTTGCAGGCTTATCCCAGTTTAACT
CAAACACACACCAATAAGAAACTTTCCCTCACCCTCTCGGCTCTATCTCTCCATTTTTTCAATTCACACAACACACCCACAAACAATTCAAACAC
AACATAGCAAGCAACAAAGGATTAAAGCTTGGGAGTTCCTTCAACCATTTGGCCGAGAAACTCCTACTTGGATTGAGGAAAAAGAGACAGAATGA
GCGGAGCGGGAAAGGTGGTGTGCGTGACAGGAGCATCAGGATACATAGCTTCTTGGTTGATCAAGATGTTGCTTCATCGTGGTTATACCGTCAAA
GCTTCAGTTCGTGACCTCAATGATCCAAAAAAGACAGAATTTTTGATGGCACTGGATGGAGCCAAGGAAAGACTTCACTTGTTTCATGCAAACTT
AGTGGAAGATGGATCCTTTGATGCAATAGTTGATGGATGTGAAGGTGTTTTTCATACTGCATCTCCAATCCTTCATCCAGCGAGTGTGACCAATC
CACATAGAGCAATTGGATCCTGCACTAAAGGGAACACTGAATGTGCTGCGATCTTGTGCTAGAGTTTCATCTATCAAAAGAGTGGTTTTAACATC
TTCTATGAGAGCAGTGACATGTAATCGGGAACTAAAGGATGGTGTTGTAGTTGATGAAAGTTGGTTTGCAGATCCAACATACTGTGAGGAGCGCA
AGTTGTGGTATCCACTATCAAAGATTTTGGCAGAGAATGCTGCTTGGGAATTCTCAAAGGAGCATGGTATTGATATGGTTGCAATCATACCAAGA
ATGGTCATGGGTCCCATCTTGCAGGCTTATCCCAGTTTAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E680389] | SGN-U619127 | Coffea canephora | Build 3 | 4 ESTs assembled | |
| [SGN-E680389] | SGN-U638229 | Coffee species | Build 1 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T454947 [Download][View] | Facility Assigned ID: cccwc22w11c3.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
