EST details — SGN-E672449
| Search information |
| Request: 672449 | Match: SGN-E672449 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C461116 | Clone name: cccs46w18b4 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E672449 | Length: 658 bp (1312 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E672449 [] (trimmed)
GTGGACCACTAGCTGCTCTGCTTTCCCGTATTTACCCCCACGCATTGTCCACTTCCATAGCTTTTTCCACCTCATTCAAGAAACTTTCAGAATCG
AGGTCAACTCTGCTCCAAGTCAAAGCATCAGAGGAGTCACCTGCTGTTGACACTACTGAGTTATTATCAGATCTGAAAGAAAAGTGGGATGCAGT
TGAAAACAAGTCCACAGTAATTGTTTATGGAGGTGGGGCAATTGTTGGAGTTTGGCTGGCTTCAATTATCATTGGTGCAATCAACTCAGTTCCTT
TGCTCCCAAAGATCCTGGAGTTGGTAGGGCTTGGTTATACAGGATGGTTTGTCTACCGGTACCTTCTATTCAAGTCAAGTAGGAAAGAATTGGCA
GAAGATATTGAATCTTTGAAGAAGAAGATCGCTGGGACTGAATAGATCCATGAGATTGGCAGCCAAACTTGCCTTGATAATTCCAACAGCGGCTC
AAATTGGTTAATAGATTTTCTGTATAAGAGGCAGTTGGTTTGATTATGTAGAATAGATGTTTCATGTATTGTAACACTGGCATATCTATTAATAA
TGATTCAGCATTCATTCTAGCTTGTGAAAAAAAAAGGCTGAAAACTTCACAAATGCTACTGGGGGGGGGGGCGGTCCCGCCTTACCCC
AGGTCAACTCTGCTCCAAGTCAAAGCATCAGAGGAGTCACCTGCTGTTGACACTACTGAGTTATTATCAGATCTGAAAGAAAAGTGGGATGCAGT
TGAAAACAAGTCCACAGTAATTGTTTATGGAGGTGGGGCAATTGTTGGAGTTTGGCTGGCTTCAATTATCATTGGTGCAATCAACTCAGTTCCTT
TGCTCCCAAAGATCCTGGAGTTGGTAGGGCTTGGTTATACAGGATGGTTTGTCTACCGGTACCTTCTATTCAAGTCAAGTAGGAAAGAATTGGCA
GAAGATATTGAATCTTTGAAGAAGAAGATCGCTGGGACTGAATAGATCCATGAGATTGGCAGCCAAACTTGCCTTGATAATTCCAACAGCGGCTC
AAATTGGTTAATAGATTTTCTGTATAAGAGGCAGTTGGTTTGATTATGTAGAATAGATGTTTCATGTATTGTAACACTGGCATATCTATTAATAA
TGATTCAGCATTCATTCTAGCTTGTGAAAAAAAAAGGCTGAAAACTTCACAAATGCTACTGGGGGGGGGGGCGGTCCCGCCTTACCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E672449] | SGN-U617372 | Coffea canephora | Build 3 | 40 ESTs assembled | |
| [SGN-E672449] | SGN-U637636 | Coffee species | Build 1 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T484979 [Download][View] | Facility Assigned ID: cccs46w18b4.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
