EST details — SGN-E666161
| Search information |
| Request: 666161 | Match: SGN-E666161 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C456742 | Clone name: cccs46w12e22 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E666161 | Length: 991 bp (991 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E666161 [] (trimmed - flagged)
CGCGGGGGTAGCTAAGACTGTGGATCCCCGGGCTGCAGGAATTCGGCACGAGGATTTTGGACACTGTGGCAGCACCAAGCATACCGGTCAAGGAT
ATGGGGGGAACAACTACACCTTCAGATGCAGTGAGGGATGCCAACCCACCAGCAGAAAAGAAGAGAGCCATTGATTGATACGGATGAACTTGATG
AAGCTGGGACCTGAAGAGAAGGATCACTGGGTTCCTGATAAAGAAGTTAACAAATGTTCCAGGCGTTCATCAATTTTCAATGCTTTTCACCCGAA
ACATCATTGTACGAATTGTGGGGATATTTTTTGTGACAAATGCACACAAGGAAGAGTTGCCCTCACTGCCGACGAAAGTGCTCAACCAGTTCGGG
TCTGTGACCGATGTCTTGGCAAAAATTACTCAGACGCGGAATAACACAGAGGAAGCGGCTGCCAGATTCGCTGGAGCATCAGAGTCACGAGGAGC
TTGTGAAAAAACCTGTGGAGGAGATGGACAAAAATCGCCAGACGTCAACATATGTACCTTCTGATGGATTTGGCACACGGACAAAAGAGGTTGCA
TGTACAACCTGCACGGTCCTCTGACAGGTTCTTGTTCCGGCCTCTGGTCCTGAAACCCTTGAATGTAGTTGAACGCCAGCCCCTTTTTCTTGTGG
CCGCTCATTGAACGTCACATCTTCTTGTCACTCGGGGGTTGTACAATACCGCGCCCATTAACAAATCAAAATTTAATTTATGCGTTCGTTGCAAA
ATAAGTAAATTTGGTGACCCAGGAGGCCGATTCTCTCTGGAACATTGGAAACAAATCCCGCCAGGATAAGAATAACATTCTGTCCCGTTGTGATC
CGTAAAGAGAAACAACTCCCGAATATTACCCCGGGCGCCCCCTCCCCCGATGAACCTATATGCGGGGTAGAAAACCCCCGACCTTCTTCTTTGTT
AAACCTCTAGGGGCATATGGCGCATTACTGACGAATTCGAC
ATGGGGGGAACAACTACACCTTCAGATGCAGTGAGGGATGCCAACCCACCAGCAGAAAAGAAGAGAGCCATTGATTGATACGGATGAACTTGATG
AAGCTGGGACCTGAAGAGAAGGATCACTGGGTTCCTGATAAAGAAGTTAACAAATGTTCCAGGCGTTCATCAATTTTCAATGCTTTTCACCCGAA
ACATCATTGTACGAATTGTGGGGATATTTTTTGTGACAAATGCACACAAGGAAGAGTTGCCCTCACTGCCGACGAAAGTGCTCAACCAGTTCGGG
TCTGTGACCGATGTCTTGGCAAAAATTACTCAGACGCGGAATAACACAGAGGAAGCGGCTGCCAGATTCGCTGGAGCATCAGAGTCACGAGGAGC
TTGTGAAAAAACCTGTGGAGGAGATGGACAAAAATCGCCAGACGTCAACATATGTACCTTCTGATGGATTTGGCACACGGACAAAAGAGGTTGCA
TGTACAACCTGCACGGTCCTCTGACAGGTTCTTGTTCCGGCCTCTGGTCCTGAAACCCTTGAATGTAGTTGAACGCCAGCCCCTTTTTCTTGTGG
CCGCTCATTGAACGTCACATCTTCTTGTCACTCGGGGGTTGTACAATACCGCGCCCATTAACAAATCAAAATTTAATTTATGCGTTCGTTGCAAA
ATAAGTAAATTTGGTGACCCAGGAGGCCGATTCTCTCTGGAACATTGGAAACAAATCCCGCCAGGATAAGAATAACATTCTGTCCCGTTGTGATC
CGTAAAGAGAAACAACTCCCGAATATTACCCCGGGCGCCCCCTCCCCCGATGAACCTATATGCGGGGTAGAAAACCCCCGACCTTCTTCTTTGTT
AAACCTCTAGGGGCATATGGCGCATTACTGACGAATTCGAC
| Unigenes |
| Current Unigene builds | |||||
| No current unigene builds incorporate this sequence |
| Chromatogram |
| SGN-ID: SGN-T480605 [Download][View] | Facility Assigned ID: cccs46w12e22.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
| Problems: | High expected error (low overall quality) |
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
