EST details — SGN-E648624
| Search information |
| Request: 648624 | Match: SGN-E648624 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C448480 | Clone name: cccs30w28d12 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E648624 | Length: 712 bp (1015 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E648624 [] (trimmed)
GTTATCTTAGCTGATATTCGCGCTGAACAGGAAGTCCAGTCGAGGGAACTTATCGAAAGGGGATTGAAGTTGGAAGCTGATCTTCGTGCTACTGA
GCCTCTGAAAATCGAGGCTGGACAACTTCGTGCTGAAGTTCAGAGGCTGAACACCATCAGGCAGGATATGTCTGGGCAAGTGCAGGCCCTTACAA
AAGACCTTACAAGATTGCAAGCTGATAACCAGCAGATTCCTCGTTTAAGGGCTGAGCTTGACGGACTGCATCAGGAACTTATGCGCTCTAGAGCT
GCTATTGACTATGAAAAGAAAGTAAATATTGAGCTGGTGGAGCAGAGACAAGCAATGGAGAAGAATTTGGTCAGTATGGCTCGAGAAGTTGAAAA
GCTGCGTGCAGATCTTGCCAATTCTGATGGCCGAGGATGGTCTGCAGGTGGACCATATGGGATGAAATTCAGCAGCCCTGAGGGTGGTTTTCCTG
AACCTTACGGTGACGGATATGGAGCTCATATGGGTGCTGCCAACAAGGGTCCATTCTATGGCTCAAGTTCGGCTTCATGGGCAGGAGTAGAGAAG
CCACGTATCAATCGCCGTTGAGATGTGGATGTCTTGAGTGACTATAGGCATGTCTCATCCCTTCCTGTTTGGTGGCTATTATCTTGGAAAGGGTA
AAGAAGTCTTTGACTTCTATCTGTGTGTATTCCATTAGTAGATTGCA
GCCTCTGAAAATCGAGGCTGGACAACTTCGTGCTGAAGTTCAGAGGCTGAACACCATCAGGCAGGATATGTCTGGGCAAGTGCAGGCCCTTACAA
AAGACCTTACAAGATTGCAAGCTGATAACCAGCAGATTCCTCGTTTAAGGGCTGAGCTTGACGGACTGCATCAGGAACTTATGCGCTCTAGAGCT
GCTATTGACTATGAAAAGAAAGTAAATATTGAGCTGGTGGAGCAGAGACAAGCAATGGAGAAGAATTTGGTCAGTATGGCTCGAGAAGTTGAAAA
GCTGCGTGCAGATCTTGCCAATTCTGATGGCCGAGGATGGTCTGCAGGTGGACCATATGGGATGAAATTCAGCAGCCCTGAGGGTGGTTTTCCTG
AACCTTACGGTGACGGATATGGAGCTCATATGGGTGCTGCCAACAAGGGTCCATTCTATGGCTCAAGTTCGGCTTCATGGGCAGGAGTAGAGAAG
CCACGTATCAATCGCCGTTGAGATGTGGATGTCTTGAGTGACTATAGGCATGTCTCATCCCTTCCTGTTTGGTGGCTATTATCTTGGAAAGGGTA
AAGAAGTCTTTGACTTCTATCTGTGTGTATTCCATTAGTAGATTGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E648624] | SGN-U614096 | Coffea canephora | Build 3 | 2 ESTs assembled | |
| [SGN-E648624] | SGN-U632811 | Coffee species | Build 1 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T472343 [Download][View] | Facility Assigned ID: cccs30w28d12.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
