EST details — SGN-E645105
| Search information |
| Request: 645105 | Match: SGN-E645105 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C443524 | Clone name: cccs30w23f18 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C443524 [cccs30w23f18] | Trace: SGN-T471858 | EST: SGN-E648139 | Direction: 5' | Facility: Cornell |
| Clone: SGN-C443524 [cccs30w23f18] | Trace: SGN-T467387 | EST: SGN-E643668 | Direction: 5' | Facility: Cornell |
| Sequence |
| Sequence Id: SGN-E645105 | Length: 1073 bp (1073 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E645105 [] (trimmed - flagged)
GTTCAGAACTACCGGATCCCCCAGACTGCAGGAATTCGGCTCCCGGATACATGCAAGAAGACTGTCCATTGAGCTGTGGCGACACCTCTGGCACA
TGTATCTTTCCTTTTCTTAGATAAACCCTTCTGACTTGCGCATGTACAATCACCCTGGGCAATGAGAGGAGCACCTCGAGACCTGCTGCCATACC
CTTGAGAACTTCTACGAGCACTGCGTGTGCGAGGAGGTTATGTACGTTGTGAGGCAGCAACTTGTTCAAGGTGGAGGCTGGCAAGGGGAGGAGAT
GCAGCACCAGGTTATGCATATTGCTAAAAACCTCCCTCGCATGTGCAACCTGGAACCACAGCAGTGACATATCGGAGCTGCTTTCCCCTAGTAAT
TAACTTGTGCATCATGAACAACGTTCACTTGGCTTCCGGCTTTTCTGGCTGGACATTGAAGCGATGCCAATCCAATGTAGCTTACTCACAAGCAC
ATGATCGTGCGTTTTGCTATGTGCCTACCTACTTTGTAGCTTTTCTGGCGGCGTGAGTATGCACCTTGTTTCTGAAAGATGCTCGGATTTTCCTT
CAAGAAAACAAAAAAAAAACCCCGAAGGGGGGGCCCGGGCACCCTTTTTCGCCCTATTGTGGGTTCTATTTAACCTTCTCGCTGGCGGTGCGTTG
TAAAAACGTCTCAGGACCTCCTGTTGCCCACCCTTCGCCCCTATTCACGCGTTTCTCCCTTTACCCCTACCCCAATCTTGCTGTCACGTTACGCT
TATCCCGTGCCGCTTCTTACGATCGCCCGGCGGGCGGCCTGTTTGCTCATGTTGCTTGTCTTCTCGCTCAGCGGCCTCGGTGCGCGGTATCTTAC
CTCCGCAGCTTTAGTTTCACGATGGTCGTTACTCGAAGCCGCTAGTCCTAGGGTACGCGGTCTCCGAGTGAGCGACCGGACTGTATAACATCGAC
CACGTTCACCCTGTTTACTCTTATTACATCCGCCTTGCGATNTACGAAGACGCTCTGCGAAGTGTGCGCCTGCCTCCGGTCCGGCACGCTCAAGC
GCCCGCAGTGTCGGAGGGGCGAGTGCCC
TGTATCTTTCCTTTTCTTAGATAAACCCTTCTGACTTGCGCATGTACAATCACCCTGGGCAATGAGAGGAGCACCTCGAGACCTGCTGCCATACC
CTTGAGAACTTCTACGAGCACTGCGTGTGCGAGGAGGTTATGTACGTTGTGAGGCAGCAACTTGTTCAAGGTGGAGGCTGGCAAGGGGAGGAGAT
GCAGCACCAGGTTATGCATATTGCTAAAAACCTCCCTCGCATGTGCAACCTGGAACCACAGCAGTGACATATCGGAGCTGCTTTCCCCTAGTAAT
TAACTTGTGCATCATGAACAACGTTCACTTGGCTTCCGGCTTTTCTGGCTGGACATTGAAGCGATGCCAATCCAATGTAGCTTACTCACAAGCAC
ATGATCGTGCGTTTTGCTATGTGCCTACCTACTTTGTAGCTTTTCTGGCGGCGTGAGTATGCACCTTGTTTCTGAAAGATGCTCGGATTTTCCTT
CAAGAAAACAAAAAAAAAACCCCGAAGGGGGGGCCCGGGCACCCTTTTTCGCCCTATTGTGGGTTCTATTTAACCTTCTCGCTGGCGGTGCGTTG
TAAAAACGTCTCAGGACCTCCTGTTGCCCACCCTTCGCCCCTATTCACGCGTTTCTCCCTTTACCCCTACCCCAATCTTGCTGTCACGTTACGCT
TATCCCGTGCCGCTTCTTACGATCGCCCGGCGGGCGGCCTGTTTGCTCATGTTGCTTGTCTTCTCGCTCAGCGGCCTCGGTGCGCGGTATCTTAC
CTCCGCAGCTTTAGTTTCACGATGGTCGTTACTCGAAGCCGCTAGTCCTAGGGTACGCGGTCTCCGAGTGAGCGACCGGACTGTATAACATCGAC
CACGTTCACCCTGTTTACTCTTATTACATCCGCCTTGCGATNTACGAAGACGCTCTGCGAAGTGTGCGCCTGCCTCCGGTCCGGCACGCTCAAGC
GCCCGCAGTGTCGGAGGGGCGAGTGCCC
| Unigenes |
| Current Unigene builds | |||||
| No current unigene builds incorporate this sequence |
| Chromatogram |
| SGN-ID: SGN-T468824 [Download][View] | Facility Assigned ID: cccs30w23f18.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
| Problems: | High expected error (low overall quality) |
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
