EST details — SGN-E642152
| Search information |
| Request: 642152 | Match: SGN-E642152 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C424114 | Clone name: cccp21si11 |
| ||
| Library Name: cccp | Organism: Coffea canephora |
Tissue: Pericarp
Development Stage: All development stages combined
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E642152 | Length: 705 bp (992 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E642152 [] (trimmed)
GCAACAATTTGTTATAGAAACAGAAATTCTATATAACTACGGTTACATTTCTTTAAGTGACCAGGACAGAAGGAGAAAATTATGAGCGAGAGGGT
GCCATTAGGCTGATGATTTCGGGCCACTAAATGTACAACCTTCCTATATTATCACAATCAAATTCAAGCTCCGTCATAAATGGTGTTATGAACTG
AGCTCTGTTTCTTAAGAACGAACGTTAGACCAACAACAAGTACTCACCAAGCGTTCAAGAGCATAAAGCATAAAACTCAATCAGAACATATGCAG
GTTACTTTCTGGTTGAACATGCTTGAGTGAAAAATTTGTCTGAGAACAGATGTCATCACAATACTCACTTTCTTTGCAATTTTGATACCCAACAA
AAAGCCACTAGCCCAAAACTGGAACTGACTAAAACAGTAAAAAGAAAATAACATTCAGTTACAAAGTAAATAAAGAAATCAATGCCATCAAGGAC
TGGATATTTTGTATGAAGGAAGACCTTAGTTGCAACTAATCCTGCCATTGCTGTGGCAGATGCTACTGGCAGAGCTGCTCAACAGCAGCCACAAT
CTGTGGCGGTTGAACCACGGTCCATTCCTCCAATGTACCGGCATAAGGAGTTGGAACATCCTGGGAGGACAGGGCAATAATTTGTGCATCCAAAT
AATCATGGAAATTCTCATTTATTGCAGCTGTNCAGCTGGC
GCCATTAGGCTGATGATTTCGGGCCACTAAATGTACAACCTTCCTATATTATCACAATCAAATTCAAGCTCCGTCATAAATGGTGTTATGAACTG
AGCTCTGTTTCTTAAGAACGAACGTTAGACCAACAACAAGTACTCACCAAGCGTTCAAGAGCATAAAGCATAAAACTCAATCAGAACATATGCAG
GTTACTTTCTGGTTGAACATGCTTGAGTGAAAAATTTGTCTGAGAACAGATGTCATCACAATACTCACTTTCTTTGCAATTTTGATACCCAACAA
AAAGCCACTAGCCCAAAACTGGAACTGACTAAAACAGTAAAAAGAAAATAACATTCAGTTACAAAGTAAATAAAGAAATCAATGCCATCAAGGAC
TGGATATTTTGTATGAAGGAAGACCTTAGTTGCAACTAATCCTGCCATTGCTGTGGCAGATGCTACTGGCAGAGCTGCTCAACAGCAGCCACAAT
CTGTGGCGGTTGAACCACGGTCCATTCCTCCAATGTACCGGCATAAGGAGTTGGAACATCCTGGGAGGACAGGGCAATAATTTGTGCATCCAAAT
AATCATGGAAATTCTCATTTATTGCAGCTGTNCAGCTGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E642152] | SGN-U626807 | Coffea canephora | Build 3 | 1 ESTs assembled | |
| [SGN-E642152] | SGN-U635161 | Coffee species | Build 1 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T447977 [Download][View] | Facility Assigned ID: cccp21si11.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
