Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E561985

Search information 
Request: 561985Match: SGN-E561985
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C335320Clone name: 17089
nocartOrdering Not Available
Library Name: SWSTOrganism: Solanum tuberosum

Tissue: Stolon
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E561985Length: 560 bp (1100 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E561985 [] (trimmed) CAGTCATCCAAAATTCCCACATGTTCCTTCTACTGACTCCTAAACACACTCTGAAATTGAAAAAAGTGAATCTTGACAACTCCTTTTATGGATAC
TGAACAGTCTTAATTCTTTGCTTGCTATGACAGAAATGGATCTGCATCTCTTACTTGGGATTTGAGTGTTTTTTCAAGAACCCCAGTTGAGTAAA
GCTGAAATCTTGAAGTGGGTGTATTTTGTTTTTTTGTTAAAAATGAAGCAAAAGAAGGAGTTGTCTCATAGACCCAAGTTGCTGAAATATGTTTT
ATTTGGGATGATTGTGTTCTTGGGTTTGGTTTGTCTTTATAATTGTTCGTTTATGGGTCCTGGTCTTCCTATAGCGCGTGACCCTTTAGCTATTG
ATGATGGTTCTGATCCAGTTACTGGGATTTCTTACCATGGCCGCATGGATATGGATATGGAAGATCAAGAACTTGAAGTTCCTAAAAGTATTCCT
GTNTGTGATATGAGCTACTCGGAGTTGATACCCTGTCTTGACAGAAATTTGATATATCAATTGAGATTGAGGCTCAATTTGACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E561985] SGN-U293378 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T359197 [Download][View] Facility Assigned ID: bf_swstxxxx_013b12.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0126 Quality Trim Threshold: 14.5