EST details — SGN-E556935

Search information 
Request: 556935Match: SGN-E556935
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C328756Clone name: cTSD-1-F2
nocartOrdering Not Available
Library Name: cTSDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E556935Length: 641 bp (1349 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E556935 [] (trimmed) GCTCAAGCATTAAGGAAAAAAAAAAGGGTGATTAGTGCAAAAAGTGAGGAGAATGGCAAAGCTCACAGTCCTTGCAGCAATTTTACTGGTGGCCC
TTTTGGCTATTGCTTCAGCCACGGCCCACCGAACTACCATAACCACCACTGTGCTGGAGGATGAGGAGGACCCAGGACAAGGAGGGCAGTCGCAA
AAATGCCAGCAAAAAATCCAAGAGCAGCAGCAGCAGCTCTGGCACTGCCAGCAATACTTGTCTCAAATGAGCCCTTCTGACTTGCGCATGTACCC
GCTGCCGGGGCAACAAGAGGAGCACCTCCGGCCCTGCTGCCAGACCCTTGAAAACTTCGACAAGCAGTGCGTGTGCGAGGCGGTTATGTACGTTG
TGAGGCAGCAACTGCAGCAAGGTGGAGGCTGGCAAGGGGAGGAGATGCACCATCAGGTTATGCAGAAGGCTAAAAACCTCCCTCGCAAGTGCAAC
CTGGAACCACAGCAGTGCCAAATCGGAGCTGTTTTCATCTAGTAATTAACTTGTGTATGATGAACAAGGTTCACTTGGCTTCCGGCTTTTCTGGC
TGGAGATTGAAGTGATGCCAATCCAATGTAGTTTAATAAAAAGCACATGATCGTGTGTTTTGCTATGTGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E556935] SGN-U570037 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T352527 [Download][View] Facility Assigned ID: ctsd1f2
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0179 Quality Trim Threshold: 14.5