EST details — SGN-E554890

Search information 
Request: 554890Match: SGN-E554890
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333797Clone name: cTSC-5-L6
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554890Length: 580 bp (1351 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554890 [] (trimmed) TCNTGCTGAACAAACAACGTTGATAGGTCCATGAAAACTATGCACAGACAAAATAGGTCTAAGTCATGATTCTGGAAGCATGATTCCGTATCACA
AAAACCTCACAGCTCGGGGATATCGGGCACTCATATACAGTGGGGATCACGATATGTGTGTACCATTCACTGGTTCAGAAAAATGGACAAGATCA
CTTGGATATCCAATCGTGGATAAATGGAGGCCTTGGTATGTGAATGAAGAAGTTGCAGGTTACATACAAGGTTATGACAACAACCTCACATTTAT
AACTATTAAGGGAGCTGGACACACCGTGCCTGAGTACAAACCACAAGAGGCGTTGGCGTTCTATTCGCGCTGGCTAGAGGGAAAGAACATATGAT
GATATGAAGAATGAAGACTGAATTAGTAGACAATAATAAGTTCAATTATTTCAGAAAAGATTTTTTCTTTTTCCTTATGAGTACTCTTAACAGGT
GAAATTTATAAAAGAGAAAAGAAGGGAGAAGAATATTGGATTTTTACCATGTATTTGAAGATATATTTATCCAATAAGAAATGATAATTTCTCTG
TTTAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554890] SGN-U576211 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357568 [Download][View] Facility Assigned ID: ctsc5l6
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0190 Quality Trim Threshold: 12.5