EST details — SGN-E554440

Search information 
Request: 554440Match: SGN-E554440
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333257Clone name: cTSC-4-F1
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554440Length: 680 bp (1329 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554440 [] (trimmed) GCACTAATAATAAGATATGGTGAAAGACTACGTTGATCCACCTTCAGCTCCGCTGTTTCAAACAGCGGAGCTCTACAACTGGTCTTTTTACAGAG
CCTTGATTGCTGAATTTGTCGCGACGCTTCTTTTCCTCTACGTTAGCGTGGCTACTGTTATCGGCCACAAGAAGCAACTTGGTCCCTGCGATGGC
GTTGGACTTGTTGGTATTGCATGGGCTTTTGGTGGCATGATTTTTGTTCTCGTGTATTCCACTGCTGGGATTTCTGGTGGGCATATAAACCCGGC
AGTGACGTTTGGGTTATTACTAGCAAGGAATGTGTCATTACTAAGAGCGGTGGCGTATATGGTGGCGCAGTGCTTAGGAGCCATTTGCGGCGTTG
GTTTAGTGAAAGGTGTGATGAAGGATGATTATACGAAGCATGGTGGCGGTGCTAATACCGTCGCAGTTGGCTACTCAGCGGGCGCAGCATTAGGT
GCTGAGATTATTGCTACTTTCCTTCTCATGTATACCGTATTTTCCGCCACCGACGCCAAAAGGAAAGCACGTGATTCACACGTCCCAGTTCTAGC
ACCATTGCCAATTGGATTTCCTCAGTGGTTATGGTGCACTTGGCCACCATTCCCCATCATTGGCACTGGGCATTCAATCCTTGCTAGGATTTTCG
GAGCTGCTGTCATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554440] SGN-U604580 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357028 [Download][View] Facility Assigned ID: ctsc4f1
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0126 Quality Trim Threshold: 14.5