EST details — SGN-E553442
| Search information |
| Request: 553442 | Match: SGN-E553442 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C332059 | Clone name: cTSC-1-C11 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E553442 | Length: 895 bp (1287 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E553442 [] (trimmed)
GTGGCGGTGCTCAGTTCACTCTAAACGGAGTTCATTATAAGCTTGATGCTAATGAGAAACCAAACATGCTTCATGGTGGTAGAAAAGGATTTAGC
CTGCTCACTTGGAAGGTGGAGAAATACGTGAAAGATAAGGCCAATCCTTTCATTGTATTGTCCTATTACAGTCATGATGGAGAAGAAGGATTCCC
TGGAAATCTCCTGGTTAGAGTGACCTATGCTCTACTTGAACCATACAAACTGAGCGTAATAATGGAAGCGGAAGCCCTGAACAAGGCTACTCCTG
TGAATCTAGCACAACACACTTACTGGAATCTTGGAGGCCATAACAGTGGTGATGTCCTCTCGGATACAGTCCAAATATTCGGCTTACACTACACG
CCTGCGAACAACCAGCTCATCCCGACTGGAGAAATCTTACCTGTTAAAGGAACCCCGTACGATTTCTTGAAGCCCCACAAAATTCAAAGCCAGAT
GAAAGGACTTCCGAGGGGCGGAACTCCATCTGGTTATAATGTGAATTATGCCCTTGATGAAGGCAAGGACCACAAGCTGAAGCTCGCAGCAATTG
CGTACAGTAAGAAGACTGGTATTGGGATGATGATATCAACAAGTGCTCCAGGTCTGCAGTTTTACACGGCTAATTACTTGAACGTGACAGGAAAA
GGTGGATATGTTTATCAGTCACATGCAGCATACTGTTTTGAGACTCAAGGATTCCCTGATGCAGTGAACCATCCAAATTTTCCCTCAACAATCGT
TAATCCAGGAGATCTTTATGTGCANCACATGTTGGTTGAATTCAAAATCAAACAAAAATAAGAGCTCGACTAATGTACACTGTACTCGAAGAGCA
ATTGAAGCTGCCCTGATTTGAATCAGCAAATAAATGAGTA
CTGCTCACTTGGAAGGTGGAGAAATACGTGAAAGATAAGGCCAATCCTTTCATTGTATTGTCCTATTACAGTCATGATGGAGAAGAAGGATTCCC
TGGAAATCTCCTGGTTAGAGTGACCTATGCTCTACTTGAACCATACAAACTGAGCGTAATAATGGAAGCGGAAGCCCTGAACAAGGCTACTCCTG
TGAATCTAGCACAACACACTTACTGGAATCTTGGAGGCCATAACAGTGGTGATGTCCTCTCGGATACAGTCCAAATATTCGGCTTACACTACACG
CCTGCGAACAACCAGCTCATCCCGACTGGAGAAATCTTACCTGTTAAAGGAACCCCGTACGATTTCTTGAAGCCCCACAAAATTCAAAGCCAGAT
GAAAGGACTTCCGAGGGGCGGAACTCCATCTGGTTATAATGTGAATTATGCCCTTGATGAAGGCAAGGACCACAAGCTGAAGCTCGCAGCAATTG
CGTACAGTAAGAAGACTGGTATTGGGATGATGATATCAACAAGTGCTCCAGGTCTGCAGTTTTACACGGCTAATTACTTGAACGTGACAGGAAAA
GGTGGATATGTTTATCAGTCACATGCAGCATACTGTTTTGAGACTCAAGGATTCCCTGATGCAGTGAACCATCCAAATTTTCCCTCAACAATCGT
TAATCCAGGAGATCTTTATGTGCANCACATGTTGGTTGAATTCAAAATCAAACAAAAATAAGAGCTCGACTAATGTACACTGTACTCGAAGAGCA
ATTGAAGCTGCCCTGATTTGAATCAGCAAATAAATGAGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E553442] | SGN-U596624 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T355830 [Download][View] | Facility Assigned ID: ctsc1c11 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
