EST details — SGN-E549968
| Search information |
| Request: 549968 | Match: SGN-E549968 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169466 | Clone name: TUS-5-M16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C18148 [cLED-22-D16] | Trace: SGN-T54196 | EST: SGN-E238130 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E549968 | Length: 639 bp (790 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E549968 [] (trimmed)
CAGATTTTTAGTAACTCCATCTTTCTAAGACTCTTCTCCTCCTCCAATATCTTATCACAAATCAAAATAACAAAAAACATAGAAAAATAAATCAA
AATTGCACAATAAAAAGTTAACTTGACCTTCTAGGGTTTGAGTATTCAAGATCTCAAAAAAAAAAAAAAAAAAAAAAAGTTTGGGCTCGGGGAAA
AACCCAAATCAAAAAAATAAAAACCCAAACAAATAAACAGGGGATTTATTCAAAAAAAAAAAAGGGGTTATTCAAAAAGGCAAAGGAACTTACGG
TTCTTGGGGAGGCAAAAGTTCCAATGGTTATAATTTCAAGAACGGAAAAACTTCATGAGTTTATAAGCCCCTCTATCACAACCAAAAAATTGTTC
AATCTGTACCAAAAAACTATGGGAGTGGATATTTGGACTACTCACTATGAAAAAATGCAAAACCACCTAAGGAAGCTAAGGGATGTGAATAGGAT
TCTACAAAAAAAAATCAAACAGAGGAGGGGAAAAAGCCTAAATGATCTGAACTATGAACAGTGGAAAAAACTCTGGAAAAATGGGGACAATTCTC
TGAAGCTTATTCGTGAAAAAAAGTTTAAGGTGATGGGCAATCAAATTGAAACTTACAGGAAAAAGGTTA
AATTGCACAATAAAAAGTTAACTTGACCTTCTAGGGTTTGAGTATTCAAGATCTCAAAAAAAAAAAAAAAAAAAAAAAGTTTGGGCTCGGGGAAA
AACCCAAATCAAAAAAATAAAAACCCAAACAAATAAACAGGGGATTTATTCAAAAAAAAAAAAGGGGTTATTCAAAAAGGCAAAGGAACTTACGG
TTCTTGGGGAGGCAAAAGTTCCAATGGTTATAATTTCAAGAACGGAAAAACTTCATGAGTTTATAAGCCCCTCTATCACAACCAAAAAATTGTTC
AATCTGTACCAAAAAACTATGGGAGTGGATATTTGGACTACTCACTATGAAAAAATGCAAAACCACCTAAGGAAGCTAAGGGATGTGAATAGGAT
TCTACAAAAAAAAATCAAACAGAGGAGGGGAAAAAGCCTAAATGATCTGAACTATGAACAGTGGAAAAAACTCTGGAAAAATGGGGACAATTCTC
TGAAGCTTATTCGTGAAAAAAAGTTTAAGGTGATGGGCAATCAAATTGAAACTTACAGGAAAAAGGTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549968] | SGN-U568823 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350843 [Download][View] | Facility Assigned ID: AGT-277_E04_TUS5#4-E4.T3_033 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.890 | Expected Error Rate: 0.0237 | Quality Trim Threshold: 14.5 |
Working
