EST details — SGN-E549551
| Search information |
| Request: 549551 | Match: SGN-E549551 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194684 | Clone name: TUS-71-H10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104571 [cLPP-14-K10] | Trace: SGN-T174432 | EST: SGN-E360226 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194684 [TUS-71-H10] | Trace: SGN-T348407 | EST: SGN-E547532 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549551 | Length: 807 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549551 [] (trimmed)
AGATATTTCCCTCTTCTTCTTTGTCAGAATTAAATAAAAATTTCCCCCCAAAAAAAATATCCATATATTTTTTTTTAAAAAAAATAAAGTGTGTT
CATTGGGAAAAAAAAAAAATAAATATGGAGAGAACAAGTATCACTGTTGTGTCTTTGCTAGTTTGCCTTTCATTTGTGTTGGTTAAAGCTGAAGA
TCCTTACCTACGTTTTGAGTGGAATGTCACTTATGGAACTATCGCTCCGTTAGGGGTCCCACAACAAGGGATACTTATAAATGGACAACTACCGG
GACCTAGGATAAATTGTACGTCGAATAACAATATAGTTGTAAATGTGTTCAATCATTTAGATGAACCGTTGTTGTTAACATGGAACGGTGTTCAA
CAAAGGAAGAATTCGTGGCAAGATGGTACCCCGGGTACTATGTGTCCGATAATGCCAGGTACAAACTTTACGTATAGGTTCCAGGTGAAGGATCA
AATCGGTAGCTTCTTCTACTTCCCAACAACAGACTTGCATCGCGCTGCTGGTGGTTTTGGTGCTATCAATGTTCATAGTCGTGCACTTATCCCAG
TACCATTTGAGAACCCTGCGGATGACTATAGTGTGTTCGTGGGTGATTGGTATAACAAGGGGTACAAGTCATTGAAGAAGATATTGGATGGGGGA
CGGACAATTGGAAGGCCGGATGGGATTCACATAAATGGAAAGGGACCAGCATCTTCTGATCTCCCAGCACCACCACCAGAAAACACTCAAGGCAT
TGCCTGGTCCATGAACCAATTCCGCTCCTTCAGATGGAACCTTACTG
CATTGGGAAAAAAAAAAAATAAATATGGAGAGAACAAGTATCACTGTTGTGTCTTTGCTAGTTTGCCTTTCATTTGTGTTGGTTAAAGCTGAAGA
TCCTTACCTACGTTTTGAGTGGAATGTCACTTATGGAACTATCGCTCCGTTAGGGGTCCCACAACAAGGGATACTTATAAATGGACAACTACCGG
GACCTAGGATAAATTGTACGTCGAATAACAATATAGTTGTAAATGTGTTCAATCATTTAGATGAACCGTTGTTGTTAACATGGAACGGTGTTCAA
CAAAGGAAGAATTCGTGGCAAGATGGTACCCCGGGTACTATGTGTCCGATAATGCCAGGTACAAACTTTACGTATAGGTTCCAGGTGAAGGATCA
AATCGGTAGCTTCTTCTACTTCCCAACAACAGACTTGCATCGCGCTGCTGGTGGTTTTGGTGCTATCAATGTTCATAGTCGTGCACTTATCCCAG
TACCATTTGAGAACCCTGCGGATGACTATAGTGTGTTCGTGGGTGATTGGTATAACAAGGGGTACAAGTCATTGAAGAAGATATTGGATGGGGGA
CGGACAATTGGAAGGCCGGATGGGATTCACATAAATGGAAAGGGACCAGCATCTTCTGATCTCCCAGCACCACCACCAGAAAACACTCAAGGCAT
TGCCTGGTCCATGAACCAATTCCGCTCCTTCAGATGGAACCTTACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549551] | SGN-U589874 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350426 [Download][View] | Facility Assigned ID: TUS71H10_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
