EST details — SGN-E549236
| Search information |
| Request: 549236 | Match: SGN-E549236 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193569 | Clone name: TUS-68-I23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99616 [cLEZ-18-I16] | Trace: SGN-T123565 | EST: SGN-E311350 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193569 [TUS-68-I23] | Trace: SGN-T346492 | EST: SGN-E545617 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549236 | Length: 686 bp (929 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549236 [] (trimmed)
GATCGCCATCGAAGAGTATTTCACTCAGAAAAAGATGGAAAATTAGGCTTGTCAAAACCAATTTACAATATTTTTGTTTGAAGTAAATGTTCCCA
ACAAAGTGATTGTACAAATCTAAATGTTCATCATCAAAATAGAAACAATAATTAGTTCTATAGAAGCTGCACAATATTAGTTATCTCCAGATGCA
TCTCGACTCTGGCTCATTTCACAGGTTATTCCCCTGGGGCTATTCGACAAGTACTAGAGGAAATTCAGGGTTATTCTCTGTTGTCCAGAAATCGA
ATGGGGTGCTGGAAAGTCAGCGAAATCCGTAGACATCTCATTCACTTTTGTGTTTTTCTTGATACTAGCTATATTGTCCTCCAGATGTTTCTTTT
CCTCTTGCAGCAGTTTTTCCTTCTCATGAAGACCCTTAGCAGATTCAAGCAACAAATGTGTCTTTCTAGATCTGAGTTGTATTAGAGCAGTTTGA
AGTTCGTTCTCCAAATGGATAAGGTCAGTCACAGTGAGAACATCATCATTAGTTTCCTCGAGTTGCCTTTCTGTTGTTTGTAGCAGTTTTCCCAT
TGTTATGAACCCTGAGTATTTAGAGTGCTCTGCCACCTGGATTTCTGTAGAGATCTCTTTTTCTGCTTCGACGTGGCTTTTGTATCGTTGAAGCA
TTTCTGTCAGACTGTTATTGC
ACAAAGTGATTGTACAAATCTAAATGTTCATCATCAAAATAGAAACAATAATTAGTTCTATAGAAGCTGCACAATATTAGTTATCTCCAGATGCA
TCTCGACTCTGGCTCATTTCACAGGTTATTCCCCTGGGGCTATTCGACAAGTACTAGAGGAAATTCAGGGTTATTCTCTGTTGTCCAGAAATCGA
ATGGGGTGCTGGAAAGTCAGCGAAATCCGTAGACATCTCATTCACTTTTGTGTTTTTCTTGATACTAGCTATATTGTCCTCCAGATGTTTCTTTT
CCTCTTGCAGCAGTTTTTCCTTCTCATGAAGACCCTTAGCAGATTCAAGCAACAAATGTGTCTTTCTAGATCTGAGTTGTATTAGAGCAGTTTGA
AGTTCGTTCTCCAAATGGATAAGGTCAGTCACAGTGAGAACATCATCATTAGTTTCCTCGAGTTGCCTTTCTGTTGTTTGTAGCAGTTTTCCCAT
TGTTATGAACCCTGAGTATTTAGAGTGCTCTGCCACCTGGATTTCTGTAGAGATCTCTTTTTCTGCTTCGACGTGGCTTTTGTATCGTTGAAGCA
TTTCTGTCAGACTGTTATTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549236] | SGN-U593151 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350111 [Download][View] | Facility Assigned ID: TUS68I23_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |
Working
