EST details — SGN-E549166
| Search information |
| Request: 549166 | Match: SGN-E549166 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193321 | Clone name: TUS-67-O15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C100355 [cLEZ-7-J18] | Trace: SGN-T121982 | EST: SGN-E307968 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193321 [TUS-67-O15] | Trace: SGN-T346066 | EST: SGN-E545191 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549166 | Length: 610 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549166 [] (trimmed)
ACCCGGGAACCCAAGATCAATAAATCAATAAGGAAAGGGGGTCCAAAACAGGGGAATGGACAATTGATGGGGCCCCCTGAGGTTAAAGGAGCGTA
CTTTTTTCCCCTATAGCTAAAATTCTAAACTATGGAGGGCATTTTTGGACCCAGAACAAACCCCCTTCATATTCGGAAGACCCCCTTTTTTTTTT
GGGGACCCAAACTACTTCTTTAACGAAATTGGCAGGGGCCCCTAACCCCCTATAATTTTTAGGGCCCCCCCGCCTTCCCCCCGGGAAAAGGATTT
CCCCGGGCCAAATCCTGCACCCCGGGGGACCCCCTATTTCTAAAGCGGCCCCCCCCCCGGGGGACCCCCCCCTTTTGTCCCCTTTAGGGAGGGTT
AATTTCAAGCTTGGGGAAATCATGGCCAAAGCTGTTTCCTGGGGAAAATTGTTATCCCCCCACAATTCCCCCCAAAATACAAGCCGGAAGCATAA
AGGGTAAACCCGGGGGGGCCCAATGAGGGAGCCAACCCCCATTAATTGGGTTGCCCCCACGGCCCCCTTTCCAGTCGGGAAACCTGTCGGGCCAC
CTGCTTTAATAAACCGCCCAACCCCCGGGGAAAGGCGGTT
CTTTTTTCCCCTATAGCTAAAATTCTAAACTATGGAGGGCATTTTTGGACCCAGAACAAACCCCCTTCATATTCGGAAGACCCCCTTTTTTTTTT
GGGGACCCAAACTACTTCTTTAACGAAATTGGCAGGGGCCCCTAACCCCCTATAATTTTTAGGGCCCCCCCGCCTTCCCCCCGGGAAAAGGATTT
CCCCGGGCCAAATCCTGCACCCCGGGGGACCCCCTATTTCTAAAGCGGCCCCCCCCCCGGGGGACCCCCCCCTTTTGTCCCCTTTAGGGAGGGTT
AATTTCAAGCTTGGGGAAATCATGGCCAAAGCTGTTTCCTGGGGAAAATTGTTATCCCCCCACAATTCCCCCCAAAATACAAGCCGGAAGCATAA
AGGGTAAACCCGGGGGGGCCCAATGAGGGAGCCAACCCCCATTAATTGGGTTGCCCCCACGGCCCCCTTTCCAGTCGGGAAACCTGTCGGGCCAC
CTGCTTTAATAAACCGCCCAACCCCCGGGGAAAGGCGGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549166] | SGN-U592681 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350041 [Download][View] | Facility Assigned ID: TUS67O15_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.840 | Expected Error Rate: 0.0288 | Quality Trim Threshold: 12.5 |
Working
