EST details — SGN-E548507

Search information 
Request: 548507Match: SGN-E548507
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190990Clone name: TUS-61-N12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82884 [cLET-22-D23] Trace: SGN-T107959 EST: SGN-E294573 Direction: 5' Facility: TIGR
Clone: SGN-C190990 [TUS-61-N12] Trace: SGN-T342058 EST: SGN-E541183 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548507Length: 449 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548507 [] (trimmed) AAGAAATATTTTAGGAATTTTTGATTCACTTTAACAAGAATGTTCCACGGGTGTAAACATTCAGCACCGCTGACGAAAACTATAAGAGTACATGA
AAACCAATTTACAAGAGTTTCTAGCATTCTCCAATATTTCTTATATTTTCTTTTAGCTAATCCACTTTGATTTGCCAGATCTTCTCTTCCCTTCT
CGAATTCCGTGCATATAGCGAGATATTTAGTGGACTGATCGATCAAAAGTTCGCACTAAGAGAGCAGAAATCATGTTCATGACAAGGAATAGTGA
TTCCCATATCATGATTAAATCCAAACTCTTCTTCAACCCTTTGAAGCAAAGTTTGAAATTGAGGATGTGTCAACCAAGAAATTGGAATAATATCT
CGACTCTTAATTTCTCCCTCATATACCACAAAATGTCCCTTTGGGACATCATTGGGTAGCCCATTTTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548507] SGN-U594515 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349382 [Download][View] Facility Assigned ID: TUS61N12_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0268 Quality Trim Threshold: 12.5